RNA–Protein interactions for RNA: ENST00000460925.1

SF3A3-202, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 2

Gene SF3A3, Length 793 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-202ENST00000460925 ZNF839A8K0R7 811 aa5.51□□□□□ -1.53
SF3A3-202ENST00000460925 TIMM44O43615 452 aa5.51□□□□□ -1.53
SF3A3-202ENST00000460925 ADAMTS4O75173 837 aa5.51□□□□□ -1.53
SF3A3-202ENST00000460925 OFD1O75665 1012 aa5.51□□□□□ -1.53
SF3A3-202ENST00000460925 CDKL5O76039 1030 aa5.51□□□□□ -1.53
SF3A3-202ENST00000460925 DEXIO95424 95 aa5.51□□□□□ -1.53
SF3A3-202ENST00000460925 CTGFP29279 349 aa5.51□□□□□ -1.53
SF3A3-202ENST00000460925 HOXA13P31271 388 aaPredicted RBP5.51□□□□□ -1.53
SF3A3-202ENST00000460925 THBS2P35442 1172 aa5.51□□□□□ -1.53
SF3A3-202ENST00000460925 GNAQP50148 359 aa5.51□□□□□ -1.53
SF3A3-202ENST00000460925 GALK1P51570 392 aa5.51□□□□□ -1.53
SF3A3-202ENST00000460925 BCAR1P56945 870 aa5.51□□□□□ -1.53
SF3A3-202ENST00000460925 PSMC1P62191 440 aaKnown RBP5.51□□□□□ -1.53
SF3A3-202ENST00000460925 UBXN2AP68543 259 aa5.51□□□□□ -1.53
SF3A3-202ENST00000460925 AKAP17AQ02040 695 aaKnown RBP5.51□□□□□ -1.53
SF3A3-202ENST00000460925 SREBF2Q12772 1141 aa5.51□□□□□ -1.53
SF3A3-202ENST00000460925 NOGQ13253 232 aa5.51□□□□□ -1.53
SF3A3-202ENST00000460925 COG2Q14746 738 aa5.51□□□□□ -1.53
SF3A3-202ENST00000460925 GRM3Q14832 879 aa5.51□□□□□ -1.53
SF3A3-202ENST00000460925 MBNL2Q5VZF2 373 aaKnown RBP5.51□□□□□ -1.53
SF3A3-202ENST00000460925 KRT40Q6A162 431 aa5.51□□□□□ -1.53
SF3A3-202ENST00000460925 FAM173BQ6P4H8 233 aa5.51□□□□□ -1.53
SF3A3-202ENST00000460925 CPLX2Q6PUV4 134 aaKnown RBP5.51□□□□□ -1.53
SF3A3-202ENST00000460925 USP17L6PQ6QN14 398 aa5.51□□□□□ -1.53
SF3A3-202ENST00000460925 ETV3LQ6ZN32 361 aa5.51□□□□□ -1.53
SF3A3-202ENST00000460925 CHST15Q7LFX5 561 aaPredicted RBP5.51□□□□□ -1.53
SF3A3-202ENST00000460925 TP53INP2Q8IXH6 220 aa5.51□□□□□ -1.53
SF3A3-202ENST00000460925 MIER2Q8N344 545 aa5.51□□□□□ -1.53
SF3A3-202ENST00000460925 FAM184AQ8NB25 1140 aa5.51□□□□□ -1.53
SF3A3-202ENST00000460925 TSPEARQ8WU66 669 aa5.51□□□□□ -1.53
SF3A3-202ENST00000460925 CPA5Q8WXQ8 436 aa5.51□□□□□ -1.53
SF3A3-202ENST00000460925 HPS3Q969F9 1004 aa5.51□□□□□ -1.53
SF3A3-202ENST00000460925 INTS4Q96HW7 963 aaKnown RBP5.51□□□□□ -1.53
SF3A3-202ENST00000460925 C8orf76Q96K31 380 aa5.51□□□□□ -1.53
SF3A3-202ENST00000460925 PARK7Q99497 189 aaKnown RBP5.51□□□□□ -1.53
SF3A3-202ENST00000460925 LLPHQ9BRT6 129 aaKnown RBP5.51□□□□□ -1.53
SF3A3-202ENST00000460925 AMNQ9BXJ7 453 aa5.51□□□□□ -1.53
SF3A3-202ENST00000460925 MOV10L1Q9BXT6 1211 aaKnown RBP5.51□□□□□ -1.53
SF3A3-202ENST00000460925 FTOQ9C0B1 505 aaKnown RBP eCLIP5.51□□□□□ -1.532e-6■□□□□ 11.3
SF3A3-202ENST00000460925 ARHGAP39Q9C0H5 1083 aa5.51□□□□□ -1.53
SF3A3-202ENST00000460925 LRRC27Q9C0I9 530 aa5.51□□□□□ -1.53
SF3A3-202ENST00000460925 PITHD1Q9GZP4 211 aaPredicted RBP5.51□□□□□ -1.53
SF3A3-202ENST00000460925 SPATC1LQ9H0A9 340 aa5.51□□□□□ -1.53
SF3A3-202ENST00000460925 SLC6A17Q9H1V8 727 aa5.51□□□□□ -1.53
SF3A3-202ENST00000460925 KCTD10Q9H3F6 313 aa5.51□□□□□ -1.53
SF3A3-202ENST00000460925 CHST12Q9NRB3 414 aa5.51□□□□□ -1.53
SF3A3-202ENST00000460925 RNF146Q9NTX7 359 aa5.51□□□□□ -1.53
SF3A3-202ENST00000460925 BARHL2Q9NY43 387 aa5.51□□□□□ -1.53
SF3A3-202ENST00000460925 COL20A1Q9P218 1284 aa5.51□□□□□ -1.53
SF3A3-202ENST00000460925 ARHGAP28Q9P2N2 729 aa5.51□□□□□ -1.53
SF3A3-202ENST00000460925 RBPJLQ9UBG7 517 aa5.51□□□□□ -1.53
SF3A3-202ENST00000460925 TUBD1Q9UJT1 453 aa5.51□□□□□ -1.53
SF3A3-202ENST00000460925 EDARQ9UNE0 448 aa5.51□□□□□ -1.53
SF3A3-202ENST00000460925 ZDHHC9Q9Y397 364 aa5.51□□□□□ -1.53
SF3A3-202ENST00000460925 ZSCAN21Q9Y5A6 473 aaPredicted RBP5.51□□□□□ -1.53
SF3A3-202ENST00000460925 PCDHA1Q9Y5I3 950 aa5.51□□□□□ -1.53
SF3A3-202ENST00000460925 MYPNQ86TC9 1320 aa5.5□□□□□ -1.53
SF3A3-202ENST00000460925 WDR81Q562E7 1941 aa5.5□□□□□ -1.53
SF3A3-202ENST00000460925 ANO9A1A5B4 782 aa5.5□□□□□ -1.53
SF3A3-202ENST00000460925 NUDT19A8MXV4 375 aa5.5□□□□□ -1.53
SF3A3-202ENST00000460925 PLA2G6O60733 806 aa5.5□□□□□ -1.53
SF3A3-202ENST00000460925 ZBED4O75132 1171 aa5.5□□□□□ -1.53
SF3A3-202ENST00000460925 ICAM1P05362 532 aa5.5□□□□□ -1.53
SF3A3-202ENST00000460925 ENO2P09104 434 aaPredicted RBP5.5□□□□□ -1.53
SF3A3-202ENST00000460925 NEFHP12036 1026 aa5.5□□□□□ -1.53
SF3A3-202ENST00000460925 OSMP13725 252 aa5.5□□□□□ -1.53
SF3A3-202ENST00000460925 SYT1P21579 422 aa5.5□□□□□ -1.53
SF3A3-202ENST00000460925 DDIT3P35638 169 aa5.5□□□□□ -1.53
SF3A3-202ENST00000460925 WASP42768 502 aa5.5□□□□□ -1.53
SF3A3-202ENST00000460925 GPR15P49685 360 aa5.5□□□□□ -1.53
SF3A3-202ENST00000460925 NLRP5P59047 1200 aa5.5□□□□□ -1.53
SF3A3-202ENST00000460925 HMGN5P82970 282 aaKnown RBP5.5□□□□□ -1.53
SF3A3-202ENST00000460925 CNTN2Q02246 1040 aa5.5□□□□□ -1.53
SF3A3-202ENST00000460925 SPIDRQ14159 915 aa5.5□□□□□ -1.53
SF3A3-202ENST00000460925 TRIM25Q14258 630 aaKnown RBP5.5□□□□□ -1.53
SF3A3-202ENST00000460925 CR1LQ2VPA4 569 aa5.5□□□□□ -1.53
SF3A3-202ENST00000460925 ARHGAP29Q52LW3 1261 aa5.5□□□□□ -1.53
SF3A3-202ENST00000460925 GJC2Q5T442 439 aaPredicted RBP5.5□□□□□ -1.53
SF3A3-202ENST00000460925 PRAMEF9Q5VWM5 478 aa5.5□□□□□ -1.53
SF3A3-202ENST00000460925 JAKMIP3Q5VZ66 844 aa5.5□□□□□ -1.53
SF3A3-202ENST00000460925 MCTP1Q6DN14 999 aa5.5□□□□□ -1.53
SF3A3-202ENST00000460925 ZC3H14Q6PJT7 736 aaKnown RBP5.5□□□□□ -1.53
SF3A3-202ENST00000460925 UNQ6494/PRO21346Q6UXR6 183 aa5.5□□□□□ -1.53
SF3A3-202ENST00000460925 IRF2BP1Q8IU81 584 aa5.5□□□□□ -1.53
SF3A3-202ENST00000460925 PRR18Q8N4B5 295 aa5.5□□□□□ -1.53
SF3A3-202ENST00000460925 PJA1Q8NG27 643 aa5.5□□□□□ -1.53
SF3A3-202ENST00000460925 IL31RAQ8NI17 732 aa5.5□□□□□ -1.53
SF3A3-202ENST00000460925 TTC17Q96AE7 1141 aa5.5□□□□□ -1.53
SF3A3-202ENST00000460925 UIMC1Q96RL1 719 aa5.5□□□□□ -1.53
SF3A3-202ENST00000460925 NCAPGQ9BPX3 1015 aa5.5□□□□□ -1.53
SF3A3-202ENST00000460925 LZTS2Q9BRK4 669 aa5.5□□□□□ -1.53
SF3A3-202ENST00000460925 PRDM12Q9H4Q4 367 aa5.5□□□□□ -1.53
SF3A3-202ENST00000460925 CXorf56Q9H5V9 222 aa5.5□□□□□ -1.53
SF3A3-202ENST00000460925 SUDS3Q9H7L9 328 aaPredicted RBP5.5□□□□□ -1.53
SF3A3-202ENST00000460925 IFT122Q9HBG6 1241 aa5.5□□□□□ -1.53
SF3A3-202ENST00000460925 MAN1C1Q9NR34 630 aa5.5□□□□□ -1.53
SF3A3-202ENST00000460925 RNF186Q9NXI6 227 aa5.5□□□□□ -1.53
SF3A3-202ENST00000460925 GALNT8Q9NY28 637 aa5.5□□□□□ -1.53
SF3A3-202ENST00000460925 DONSONQ9NYP3 566 aa5.5□□□□□ -1.53
SF3A3-202ENST00000460925 PRSS50Q9UI38 385 aa5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms