RNA–Protein interactions for RNA: ENST00000460758.1

SHISA5-211, Transcript of shisa family member 5, humanhuman

TSL 1 (best)

Gene SHISA5, Length 1,297 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA5-211ENST00000460758 GAS2L3Q86XJ1 694 aa13.66□□□□□ -0.22
SHISA5-211ENST00000460758 MFSD6LQ8IWD5 586 aa13.66□□□□□ -0.22
SHISA5-211ENST00000460758 RNF214Q8ND24 703 aa13.66□□□□□ -0.22
SHISA5-211ENST00000460758 FUBP3Q96I24 572 aaKnown RBP eCLIP13.66□□□□□ -0.22
SHISA5-211ENST00000460758 GCNAQ96QF7 691 aa13.66□□□□□ -0.22
SHISA5-211ENST00000460758 TUBGCP2Q9BSJ2 902 aa13.66□□□□□ -0.22
SHISA5-211ENST00000460758 SLC46A2Q9BY10 475 aa13.66□□□□□ -0.22
SHISA5-211ENST00000460758 SMG9Q9H0W8 520 aaKnown RBP13.66□□□□□ -0.22
SHISA5-211ENST00000460758 DPEP3Q9H4B8 488 aa13.66□□□□□ -0.22
SHISA5-211ENST00000460758 TASP1Q9H6P5 420 aa13.66□□□□□ -0.22
SHISA5-211ENST00000460758 SMYD3Q9H7B4 428 aa13.66□□□□□ -0.22
SHISA5-211ENST00000460758 TMEM8AQ9HCN3 771 aa13.66□□□□□ -0.22
SHISA5-211ENST00000460758 TAB2Q9NYJ8 693 aa13.66□□□□□ -0.22
SHISA5-211ENST00000460758 MAGED2Q9UNF1 606 aaPredicted RBP13.66□□□□□ -0.22
SHISA5-211ENST00000460758 KIAA1549LQ6ZVL6 1849 aa13.66□□□□□ -0.22
SHISA5-211ENST00000460758 VPS13AQ96RL7 3174 aa13.66□□□□□ -0.22
SHISA5-211ENST00000460758 SLC38A8A6NNN8 435 aa13.65□□□□□ -0.22
SHISA5-211ENST00000460758 ZNF263O14978 683 aa13.65□□□□□ -0.22
SHISA5-211ENST00000460758 PHACTR2O75167 634 aa13.65□□□□□ -0.22
SHISA5-211ENST00000460758 AFPP02771 609 aaKnown RBP13.65□□□□□ -0.22
SHISA5-211ENST00000460758 CSH1P0DML2 217 aa13.65□□□□□ -0.22
SHISA5-211ENST00000460758 CSH2P0DML3 217 aa13.65□□□□□ -0.22
SHISA5-211ENST00000460758 ATP1A3P13637 1013 aa13.65□□□□□ -0.22
SHISA5-211ENST00000460758 PRKCSHP14314 528 aaPredicted RBP13.65□□□□□ -0.22
SHISA5-211ENST00000460758 TARSP26639 723 aaKnown RBP13.65□□□□□ -0.22
SHISA5-211ENST00000460758 ATICP31939 592 aa13.65□□□□□ -0.22
SHISA5-211ENST00000460758 MAGEA11P43364 429 aa13.65□□□□□ -0.22
SHISA5-211ENST00000460758 FMO5P49326 533 aa13.65□□□□□ -0.22
SHISA5-211ENST00000460758 MXI1P50539 228 aa13.65□□□□□ -0.22
SHISA5-211ENST00000460758 RPL10AP62906 217 aaKnown RBP13.65□□□□□ -0.22
SHISA5-211ENST00000460758 KCNH2Q12809 1159 aa13.65□□□□□ -0.22
SHISA5-211ENST00000460758 NCOA4Q13772 614 aa13.65□□□□□ -0.22
SHISA5-211ENST00000460758 TAF12Q16514 161 aa13.65□□□□□ -0.22
SHISA5-211ENST00000460758 ZNF699Q32M78 642 aa13.65□□□□□ -0.22
SHISA5-211ENST00000460758 KRT39Q6A163 491 aa13.65□□□□□ -0.22
SHISA5-211ENST00000460758 C4orf50Q6ZRC1 276 aa13.65□□□□□ -0.22
SHISA5-211ENST00000460758 ANKRD20A12PQ8NF67 263 aa13.65□□□□□ -0.22
SHISA5-211ENST00000460758 OR6B3Q8NGW1 331 aa13.65□□□□□ -0.22
SHISA5-211ENST00000460758 IRF7Q92985 503 aa13.65□□□□□ -0.22
SHISA5-211ENST00000460758 E2F7Q96AV8 911 aa13.65□□□□□ -0.22
SHISA5-211ENST00000460758 TRMT2BQ96GJ1 504 aaKnown RBP13.65□□□□□ -0.22
SHISA5-211ENST00000460758 PCED1BQ96HM7 432 aa13.65□□□□□ -0.22
SHISA5-211ENST00000460758 MYRFLQ96LU7 910 aa13.65□□□□□ -0.22
SHISA5-211ENST00000460758 SNX25Q9H3E2 840 aa13.65□□□□□ -0.22
SHISA5-211ENST00000460758 VRTNQ9H8Y1 702 aa13.65□□□□□ -0.22
SHISA5-211ENST00000460758 TRPV5Q9NQA5 729 aa13.65□□□□□ -0.22
SHISA5-211ENST00000460758 NXF1Q9UBU9 619 aaKnown RBP13.65□□□□□ -0.22
SHISA5-211ENST00000460758 LIMA1Q9UHB6 759 aaKnown RBP13.65□□□□□ -0.22
SHISA5-211ENST00000460758 PTPRZ1P23471 2315 aaPredicted RBP13.64□□□□□ -0.23
SHISA5-211ENST00000460758 RIF1Q5UIP0 2472 aaKnown RBP13.64□□□□□ -0.23
SHISA5-211ENST00000460758 HLA-DRAP01903 254 aa13.64□□□□□ -0.23
SHISA5-211ENST00000460758 FAM163BP0C2L3 166 aa13.64□□□□□ -0.23
SHISA5-211ENST00000460758 BDNFP23560 247 aa13.64□□□□□ -0.23
SHISA5-211ENST00000460758 WEE1P30291 646 aa13.64□□□□□ -0.23
SHISA5-211ENST00000460758 NBL1P41271 181 aa13.64□□□□□ -0.23
SHISA5-211ENST00000460758 RAP1GAPP47736 663 aa13.64□□□□□ -0.23
SHISA5-211ENST00000460758 COPB1P53618 953 aaKnown RBP13.64□□□□□ -0.23
SHISA5-211ENST00000460758 CYP27A1Q02318 531 aa13.64□□□□□ -0.23
SHISA5-211ENST00000460758 CBWD6Q4V339 395 aa13.64□□□□□ -0.23
SHISA5-211ENST00000460758 MDH1BQ5I0G3 518 aa13.64□□□□□ -0.23
SHISA5-211ENST00000460758 CBWD3Q5JTY5 395 aa13.64□□□□□ -0.23
SHISA5-211ENST00000460758 MIIPQ5JXC2 388 aa13.64□□□□□ -0.23
SHISA5-211ENST00000460758 CBWD5Q5RIA9 395 aa13.64□□□□□ -0.23
SHISA5-211ENST00000460758 SCARA5Q6ZMJ2 495 aa13.64□□□□□ -0.23
SHISA5-211ENST00000460758 SCN4BQ8IWT1 228 aa13.64□□□□□ -0.23
SHISA5-211ENST00000460758 ZNF687Q8N1G0 1237 aa13.64□□□□□ -0.23
SHISA5-211ENST00000460758 MYCBPAPQ8TBZ2 947 aa13.64□□□□□ -0.23
SHISA5-211ENST00000460758 ZFYVE19Q96K21 471 aa13.64□□□□□ -0.23
SHISA5-211ENST00000460758 OSBPL6Q9BZF3 934 aa13.64□□□□□ -0.23
SHISA5-211ENST00000460758 SDCBP2Q9H190 292 aa13.64□□□□□ -0.23
SHISA5-211ENST00000460758 RBSNQ9H1K0 784 aa13.64□□□□□ -0.23
SHISA5-211ENST00000460758 TMEM30AQ9NV96 361 aa13.64□□□□□ -0.23
SHISA5-211ENST00000460758 OBP2AQ9NY56 170 aa13.64□□□□□ -0.23
SHISA5-211ENST00000460758 PIAS3Q9Y6X2 628 aa13.64□□□□□ -0.23
SHISA5-211ENST00000460758 USP34Q70CQ2 3546 aa13.63□□□□□ -0.23
SHISA5-211ENST00000460758 FAM170BA6NMN3 283 aa13.63□□□□□ -0.23
SHISA5-211ENST00000460758 PMM2O15305 246 aa13.63□□□□□ -0.23
SHISA5-211ENST00000460758 CHADO15335 359 aa13.63□□□□□ -0.23
SHISA5-211ENST00000460758 P4HA2O15460 535 aa13.63□□□□□ -0.23
SHISA5-211ENST00000460758 TPM2P07951 284 aa13.63□□□□□ -0.23
SHISA5-211ENST00000460758 GNL1P36915 607 aaPredicted RBP13.63□□□□□ -0.23
SHISA5-211ENST00000460758 PIK3CAP42336 1068 aa13.63□□□□□ -0.23
SHISA5-211ENST00000460758 CACNA2D1P54289 1103 aa13.63□□□□□ -0.23
SHISA5-211ENST00000460758 CDH8P55286 799 aa13.63□□□□□ -0.23
SHISA5-211ENST00000460758 FZD5Q13467 585 aa13.63□□□□□ -0.23
SHISA5-211ENST00000460758 MAPRE1Q15691 268 aaKnown RBP13.63□□□□□ -0.23
SHISA5-211ENST00000460758 VWA3BQ502W6 1294 aa13.63□□□□□ -0.23
SHISA5-211ENST00000460758 ZNF667Q5HYK9 610 aa13.63□□□□□ -0.23
SHISA5-211ENST00000460758 TXNDC8Q6A555 127 aa13.63□□□□□ -0.23
SHISA5-211ENST00000460758 VSTM1Q6UX27 236 aa13.63□□□□□ -0.23
SHISA5-211ENST00000460758 ZNF852Q6ZMS4 543 aa13.63□□□□□ -0.23
SHISA5-211ENST00000460758 APTXQ7Z2E3 356 aaKnown RBP13.63□□□□□ -0.23
SHISA5-211ENST00000460758 YAF2Q8IY57 180 aa13.63□□□□□ -0.23
SHISA5-211ENST00000460758 CMTM8Q8IZV2 173 aa13.63□□□□□ -0.23
SHISA5-211ENST00000460758 MAB21L3Q8N8X9 362 aa13.63□□□□□ -0.23
SHISA5-211ENST00000460758 RIN3Q8TB24 985 aa13.63□□□□□ -0.23
SHISA5-211ENST00000460758 TAS1R2Q8TE23 839 aa13.63□□□□□ -0.23
SHISA5-211ENST00000460758 VPS16Q9H269 839 aa13.63□□□□□ -0.23
SHISA5-211ENST00000460758 NDST4Q9H3R1 872 aa13.63□□□□□ -0.23
SHISA5-211ENST00000460758 ZMYM5Q9UJ78 669 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms