RNA–Protein interactions for RNA: ENST00000460739.5

SOX2-OT-201, SOX2 overlapping transcript, humanhuman

TSL 4 BASIC

Gene SOX2-OT, Length 609 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-201ENST00000460739 OTOL1A6NHN0 477 aaPredicted RBP12.58□□□□□ -0.4
SOX2-OT-201ENST00000460739 F8VP50 259 aa12.58□□□□□ -0.4
SOX2-OT-201ENST00000460739 IKBKBO14920 756 aa12.58□□□□□ -0.4
SOX2-OT-201ENST00000460739 MAPK13O15264 365 aa12.58□□□□□ -0.4
SOX2-OT-201ENST00000460739 KIF20AO95235 890 aa12.58□□□□□ -0.4
SOX2-OT-201ENST00000460739 VNN1O95497 513 aa12.58□□□□□ -0.4
SOX2-OT-201ENST00000460739 PRR29P0C7W0 189 aa12.58□□□□□ -0.4
SOX2-OT-201ENST00000460739 TCF3P15923 654 aa12.58□□□□□ -0.4
SOX2-OT-201ENST00000460739 PFKLP17858 780 aa12.58□□□□□ -0.4
SOX2-OT-201ENST00000460739 PPP3CCP48454 512 aa12.58□□□□□ -0.4
SOX2-OT-201ENST00000460739 USP46P62068 366 aa12.58□□□□□ -0.4
SOX2-OT-201ENST00000460739 DLG4P78352 724 aa12.58□□□□□ -0.4
SOX2-OT-201ENST00000460739 USP4Q13107 963 aa12.58□□□□□ -0.4
SOX2-OT-201ENST00000460739 NCOA4Q13772 614 aa12.58□□□□□ -0.4
SOX2-OT-201ENST00000460739 KCNB1Q14721 858 aa12.58□□□□□ -0.4
SOX2-OT-201ENST00000460739 MTF1Q14872 753 aa12.58□□□□□ -0.4
SOX2-OT-201ENST00000460739 PDGFRLQ15198 375 aa12.58□□□□□ -0.4
SOX2-OT-201ENST00000460739 ZNF77Q15935 545 aa12.58□□□□□ -0.4
SOX2-OT-201ENST00000460739 ZACNQ401N2 412 aa12.58□□□□□ -0.4
SOX2-OT-201ENST00000460739 ZNF667Q5HYK9 610 aa12.58□□□□□ -0.4
SOX2-OT-201ENST00000460739 TMEM196Q5HYL7 178 aa12.58□□□□□ -0.4
SOX2-OT-201ENST00000460739 KRBA2Q6ZNG9 492 aa12.58□□□□□ -0.4
SOX2-OT-201ENST00000460739 Q6ZS52 159 aa12.58□□□□□ -0.4
SOX2-OT-201ENST00000460739 ARL14EPQ8N8R7 260 aaPredicted RBP12.58□□□□□ -0.4
SOX2-OT-201ENST00000460739 B3GALNT2Q8NCR0 500 aa12.58□□□□□ -0.4
SOX2-OT-201ENST00000460739 TMC2Q8TDI7 906 aa12.58□□□□□ -0.4
SOX2-OT-201ENST00000460739 OSCP1Q8WVF1 389 aa12.58□□□□□ -0.4
SOX2-OT-201ENST00000460739 CCDC47Q96A33 483 aaKnown RBP12.58□□□□□ -0.4
SOX2-OT-201ENST00000460739 B3GNT5Q9BYG0 378 aa12.58□□□□□ -0.4
SOX2-OT-201ENST00000460739 SMYD3Q9H7B4 428 aa12.58□□□□□ -0.4
SOX2-OT-201ENST00000460739 TMEM30AQ9NV96 361 aa12.58□□□□□ -0.4
SOX2-OT-201ENST00000460739 DCHS1Q96JQ0 3298 aa12.57□□□□□ -0.4
SOX2-OT-201ENST00000460739 TRDMT1O14717 391 aaKnown RBP12.57□□□□□ -0.4
SOX2-OT-201ENST00000460739 CALUO43852 315 aaPredicted RBP12.57□□□□□ -0.4
SOX2-OT-201ENST00000460739 ARSAP15289 507 aa12.57□□□□□ -0.4
SOX2-OT-201ENST00000460739 HDCP19113 662 aa12.57□□□□□ -0.4
SOX2-OT-201ENST00000460739 PDE6CP51160 858 aa12.57□□□□□ -0.4
SOX2-OT-201ENST00000460739 CACNA2D1P54289 1103 aa12.57□□□□□ -0.4
SOX2-OT-201ENST00000460739 CDH8P55286 799 aa12.57□□□□□ -0.4
SOX2-OT-201ENST00000460739 AMPD2Q01433 879 aa12.57□□□□□ -0.4
SOX2-OT-201ENST00000460739 NFIL3Q16649 462 aa12.57□□□□□ -0.4
SOX2-OT-201ENST00000460739 SGSM1Q2NKQ1 1148 aa12.57□□□□□ -0.4
SOX2-OT-201ENST00000460739 C1orf220Q5T0J3 134 aa12.57□□□□□ -0.4
SOX2-OT-201ENST00000460739 DCLK2Q8N568 766 aa12.57□□□□□ -0.4
SOX2-OT-201ENST00000460739 TAF4BQ92750 862 aa12.57□□□□□ -0.4
SOX2-OT-201ENST00000460739 HINFPQ9BQA5 517 aa12.57□□□□□ -0.4
SOX2-OT-201ENST00000460739 ZNF518BQ9C0D4 1074 aa12.57□□□□□ -0.4
SOX2-OT-201ENST00000460739 GOLPH3LQ9H4A5 285 aa12.57□□□□□ -0.4
SOX2-OT-201ENST00000460739 TRPM5Q9NZQ8 1165 aa12.57□□□□□ -0.4
SOX2-OT-201ENST00000460739 ARHGAP26Q9UNA1 814 aa12.57□□□□□ -0.4
SOX2-OT-201ENST00000460739 SMG5Q9UPR3 1016 aaKnown RBP12.57□□□□□ -0.4
SOX2-OT-201ENST00000460739 FRMD4BQ9Y2L6 1034 aa12.57□□□□□ -0.4
SOX2-OT-201ENST00000460739 MYH10P35580 1976 aa12.56□□□□□ -0.4
SOX2-OT-201ENST00000460739 ZNF840PA6NDX5 716 aa12.56□□□□□ -0.4
SOX2-OT-201ENST00000460739 K7ESF4 209 aa12.56□□□□□ -0.4
SOX2-OT-201ENST00000460739 CLDN5O00501 218 aa12.56□□□□□ -0.4
SOX2-OT-201ENST00000460739 ZNF202O95125 648 aa12.56□□□□□ -0.4
SOX2-OT-201ENST00000460739 ASS1P00966 412 aaKnown RBP12.56□□□□□ -0.4
SOX2-OT-201ENST00000460739 P4HA1P13674 534 aa12.56□□□□□ -0.4
SOX2-OT-201ENST00000460739 NR2F2P24468 414 aa12.56□□□□□ -0.4
SOX2-OT-201ENST00000460739 HOXA6P31267 233 aa12.56□□□□□ -0.4
SOX2-OT-201ENST00000460739 GJA4P35212 333 aa12.56□□□□□ -0.4
SOX2-OT-201ENST00000460739 RAP1GAPP47736 663 aa12.56□□□□□ -0.4
SOX2-OT-201ENST00000460739 GRSF1Q12849 480 aaKnown RBP eCLIP12.56□□□□□ -0.4
SOX2-OT-201ENST00000460739 EML3Q32P44 896 aa12.56□□□□□ -0.4
SOX2-OT-201ENST00000460739 CEP135Q66GS9 1140 aa12.56□□□□□ -0.4
SOX2-OT-201ENST00000460739 FSTL4Q6MZW2 842 aa12.56□□□□□ -0.4
SOX2-OT-201ENST00000460739 SV2AQ7L0J3 742 aa12.56□□□□□ -0.4
SOX2-OT-201ENST00000460739 KIAA2013Q8IYS2 634 aa12.56□□□□□ -0.4
SOX2-OT-201ENST00000460739 GUF1Q8N442 669 aaKnown RBP12.56□□□□□ -0.4
SOX2-OT-201ENST00000460739 CPA6Q8N4T0 437 aa12.56□□□□□ -0.4
SOX2-OT-201ENST00000460739 SH3RF2Q8TEC5 729 aa12.56□□□□□ -0.4
SOX2-OT-201ENST00000460739 ATP2A3Q93084 1043 aa12.56□□□□□ -0.4
SOX2-OT-201ENST00000460739 TNIP3Q96KP6 325 aa12.56□□□□□ -0.4
SOX2-OT-201ENST00000460739 SDCBP2Q9H190 292 aa12.56□□□□□ -0.4
SOX2-OT-201ENST00000460739 ECT2Q9H8V3 914 aa12.56□□□□□ -0.4
SOX2-OT-201ENST00000460739 C2orf42Q9NWW7 574 aa12.56□□□□□ -0.4
SOX2-OT-201ENST00000460739 DUS2Q9NX74 493 aaKnown RBP12.56□□□□□ -0.4
SOX2-OT-201ENST00000460739 AKAP3O75969 853 aa12.55□□□□□ -0.4
SOX2-OT-201ENST00000460739 RTN3O95197 1032 aaPredicted RBP12.55□□□□□ -0.4
SOX2-OT-201ENST00000460739 OLFM2O95897 454 aa12.55□□□□□ -0.4
SOX2-OT-201ENST00000460739 OAS1P00973 400 aaKnown RBP12.55□□□□□ -0.4
SOX2-OT-201ENST00000460739 ID4P47928 161 aa12.55□□□□□ -0.4
SOX2-OT-201ENST00000460739 IFNAR2P48551 515 aa12.55□□□□□ -0.4
SOX2-OT-201ENST00000460739 MCCD1P59942 119 aaPredicted RBP12.55□□□□□ -0.4
SOX2-OT-201ENST00000460739 SLC7A9P82251 487 aa12.55□□□□□ -0.4
SOX2-OT-201ENST00000460739 ZXDBP98169 803 aa12.55□□□□□ -0.4
SOX2-OT-201ENST00000460739 ENPEPQ07075 957 aa12.55□□□□□ -0.4
SOX2-OT-201ENST00000460739 DMWDQ09019 674 aa12.55□□□□□ -0.4
SOX2-OT-201ENST00000460739 TAF10Q12962 218 aa12.55□□□□□ -0.4
SOX2-OT-201ENST00000460739 SCARA5Q6ZMJ2 495 aa12.55□□□□□ -0.4
SOX2-OT-201ENST00000460739 PAQR9Q6ZVX9 377 aa12.55□□□□□ -0.4
SOX2-OT-201ENST00000460739 INTS8Q75QN2 995 aaKnown RBP12.55□□□□□ -0.4
SOX2-OT-201ENST00000460739 FAM35AQ86V20 835 aa12.55□□□□□ -0.4
SOX2-OT-201ENST00000460739 NUP93Q8N1F7 819 aa12.55□□□□□ -0.4
SOX2-OT-201ENST00000460739 KIAA1958Q8N8K9 716 aa12.55□□□□□ -0.4
SOX2-OT-201ENST00000460739 EXOC4Q96A65 974 aa12.55□□□□□ -0.4
SOX2-OT-201ENST00000460739 ELMO3Q96BJ8 720 aa12.55□□□□□ -0.4
SOX2-OT-201ENST00000460739 SLITRK1Q96PX8 696 aa12.55□□□□□ -0.4
SOX2-OT-201ENST00000460739 RNF38Q9H0F5 515 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms