RNA–Protein interactions for RNA: ENST00000460657.1

CPNE6-202, Transcript of copine 6, humanhuman

TSL 2

Gene CPNE6, Length 4,540 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE6-202ENST00000460657 L3MBTL1Q9Y468 752 aa12.56□□□□□ -0.4
CPNE6-202ENST00000460657 STAG3L1P0CL83 205 aa12.56□□□□□ -0.4
CPNE6-202ENST00000460657 ATICP31939 592 aa12.56□□□□□ -0.4
CPNE6-202ENST00000460657 MRPS9P82933 396 aaKnown RBP12.56□□□□□ -0.4
CPNE6-202ENST00000460657 RNF43Q68DV7 783 aa12.56□□□□□ -0.4
CPNE6-202ENST00000460657 KLC3Q6P597 504 aa12.56□□□□□ -0.4
CPNE6-202ENST00000460657 ALLCQ8N6M5 410 aa12.56□□□□□ -0.4
CPNE6-202ENST00000460657 ZNF75CPQ92670 426 aaPredicted RBP12.56□□□□□ -0.4
CPNE6-202ENST00000460657 AKT1S1Q96B36 256 aa12.56□□□□□ -0.4
CPNE6-202ENST00000460657 CCDC124Q96CT7 223 aaKnown RBP12.56□□□□□ -0.4
CPNE6-202ENST00000460657 PWWP2AQ96N64 755 aa12.56□□□□□ -0.4
CPNE6-202ENST00000460657 MYLK2Q9H1R3 596 aa12.56□□□□□ -0.4
CPNE6-202ENST00000460657 GRHL1Q9NZI5 618 aa12.56□□□□□ -0.4
CPNE6-202ENST00000460657 CCNE2O96020 404 aa12.55□□□□□ -0.4
CPNE6-202ENST00000460657 PDGFRBP09619 1106 aa12.55□□□□□ -0.4
CPNE6-202ENST00000460657 CXCL8P10145 99 aa12.55□□□□□ -0.4
CPNE6-202ENST00000460657 CYP2C8P10632 490 aa12.55□□□□□ -0.4
CPNE6-202ENST00000460657 MYL2P10916 166 aa12.55□□□□□ -0.4
CPNE6-202ENST00000460657 CHRNB2P17787 502 aa12.55□□□□□ -0.4
CPNE6-202ENST00000460657 CPA2P48052 419 aa12.55□□□□□ -0.4
CPNE6-202ENST00000460657 SLC26A2P50443 739 aa12.55□□□□□ -0.4
CPNE6-202ENST00000460657 DAB2IPQ5VWQ8 1189 aa12.55□□□□□ -0.4
CPNE6-202ENST00000460657 CRELD2Q6UXH1 353 aaPredicted RBP12.55□□□□□ -0.4
CPNE6-202ENST00000460657 PRPF39Q86UA1 669 aaKnown RBP12.55□□□□□ -0.4
CPNE6-202ENST00000460657 PIK3R5Q8WYR1 880 aa12.55□□□□□ -0.4
CPNE6-202ENST00000460657 PPWD1Q96BP3 646 aaKnown RBP12.55□□□□□ -0.4
CPNE6-202ENST00000460657 ATXN7L3BQ96GX2 97 aa12.55□□□□□ -0.4
CPNE6-202ENST00000460657 C15orf41Q9Y2V0 281 aa12.55□□□□□ -0.4
CPNE6-202ENST00000460657 ARHGEF37A1IGU5 675 aa12.55□□□□□ -0.4
CPNE6-202ENST00000460657 PYGBP11216 843 aa12.55□□□□□ -0.4
CPNE6-202ENST00000460657 CALB2P22676 271 aa12.55□□□□□ -0.4
CPNE6-202ENST00000460657 CDC42EP1Q00587 391 aa12.55□□□□□ -0.4
CPNE6-202ENST00000460657 CUL3Q13618 768 aa12.55□□□□□ -0.4
CPNE6-202ENST00000460657 MCUQ8NE86 351 aa12.55□□□□□ -0.4
CPNE6-202ENST00000460657 APPL2Q8NEU8 664 aa12.55□□□□□ -0.4
CPNE6-202ENST00000460657 SLC16A10Q8TF71 515 aa12.55□□□□□ -0.4
CPNE6-202ENST00000460657 ATP9BO43861 1147 aa12.55□□□□□ -0.4
CPNE6-202ENST00000460657 MAP3K6O95382 1288 aa12.55□□□□□ -0.4
CPNE6-202ENST00000460657 TAC1P20366 129 aa12.55□□□□□ -0.4
CPNE6-202ENST00000460657 XRCC4Q13426 336 aa12.55□□□□□ -0.4
CPNE6-202ENST00000460657 PDK1Q15118 436 aa12.55□□□□□ -0.4
CPNE6-202ENST00000460657 TBCCQ15814 346 aa12.55□□□□□ -0.4
CPNE6-202ENST00000460657 DAW1Q8N136 415 aa12.55□□□□□ -0.4
CPNE6-202ENST00000460657 RNF139Q8WU17 664 aa12.55□□□□□ -0.4
CPNE6-202ENST00000460657 FAM172AQ8WUF8 416 aa12.55□□□□□ -0.4
CPNE6-202ENST00000460657 ANKRD27Q96NW4 1050 aa12.55□□□□□ -0.4
CPNE6-202ENST00000460657 TMEM120AQ9BXJ8 343 aa12.55□□□□□ -0.4
CPNE6-202ENST00000460657 PFDN4Q9NQP4 134 aa12.55□□□□□ -0.4
CPNE6-202ENST00000460657 ZDHHC18Q9NUE0 388 aa12.55□□□□□ -0.4
CPNE6-202ENST00000460657 THEGQ9P2T0 379 aa12.55□□□□□ -0.4
CPNE6-202ENST00000460657 APOC4-APOC2K7ER74 178 aa12.54□□□□□ -0.4
CPNE6-202ENST00000460657 APOC2P02655 101 aa12.54□□□□□ -0.4
CPNE6-202ENST00000460657 ETS1P14921 441 aa12.54□□□□□ -0.4
CPNE6-202ENST00000460657 ERFP50548 548 aa12.54□□□□□ -0.4
CPNE6-202ENST00000460657 TPI1P60174 286 aa12.54□□□□□ -0.4
CPNE6-202ENST00000460657 RCN1Q15293 331 aa12.54□□□□□ -0.4
CPNE6-202ENST00000460657 EFHC1Q5JVL4 640 aa12.54□□□□□ -0.4
CPNE6-202ENST00000460657 CCNYL1Q8N7R7 359 aa12.54□□□□□ -0.4
CPNE6-202ENST00000460657 DDX27Q96GQ7 796 aaKnown RBP12.54□□□□□ -0.4
CPNE6-202ENST00000460657 AGAP3Q96P47 875 aa12.54□□□□□ -0.4
CPNE6-202ENST00000460657 GPATCH2LQ9NWQ4 482 aa12.54□□□□□ -0.4
CPNE6-202ENST00000460657 WRAP73Q9P2S5 460 aaPredicted RBP12.54□□□□□ -0.4
CPNE6-202ENST00000460657 RPTORQ8N122 1335 aa12.54□□□□□ -0.4
CPNE6-202ENST00000460657 ACKR2O00590 384 aa12.54□□□□□ -0.4
CPNE6-202ENST00000460657 POLBP06746 335 aa12.54□□□□□ -0.4
CPNE6-202ENST00000460657 BGNP21810 368 aa12.54□□□□□ -0.4
CPNE6-202ENST00000460657 RPA3P35244 121 aaPredicted RBP12.54□□□□□ -0.4
CPNE6-202ENST00000460657 RPL7AP62424 266 aaKnown RBP12.54□□□□□ -0.4
CPNE6-202ENST00000460657 LAMC2Q13753 1193 aa12.54□□□□□ -0.4
CPNE6-202ENST00000460657 ACAP1Q15027 740 aa12.54□□□□□ -0.4
CPNE6-202ENST00000460657 ZNF484Q5JVG2 852 aa12.54□□□□□ -0.4
CPNE6-202ENST00000460657 RABGAP1LQ5R372 815 aa12.54□□□□□ -0.4
CPNE6-202ENST00000460657 TRIM56Q9BRZ2 755 aaKnown RBP12.54□□□□□ -0.4
CPNE6-202ENST00000460657 OSBPL7Q9BZF2 842 aa12.54□□□□□ -0.4
CPNE6-202ENST00000460657 PFDN6O15212 129 aa12.54□□□□□ -0.4
CPNE6-202ENST00000460657 CD4P01730 458 aa12.54□□□□□ -0.4
CPNE6-202ENST00000460657 ADRA1DP25100 572 aa12.54□□□□□ -0.4
CPNE6-202ENST00000460657 SPRP35270 261 aaPredicted RBP12.54□□□□□ -0.4
CPNE6-202ENST00000460657 FDFT1P37268 417 aa12.54□□□□□ -0.4
CPNE6-202ENST00000460657 CYP1B1Q16678 543 aa12.54□□□□□ -0.4
CPNE6-202ENST00000460657 WASHC2DQ5SRD0 308 aa12.54□□□□□ -0.4
CPNE6-202ENST00000460657 ZDHHC24Q6UX98 284 aa12.54□□□□□ -0.4
CPNE6-202ENST00000460657 PRUNE1Q86TP1 453 aa12.54□□□□□ -0.4
CPNE6-202ENST00000460657 APBB2Q92870 758 aa12.54□□□□□ -0.4
CPNE6-202ENST00000460657 FAM84AQ96KN4 292 aa12.54□□□□□ -0.4
CPNE6-202ENST00000460657 CYP39A1Q9NYL5 469 aa12.54□□□□□ -0.4
CPNE6-202ENST00000460657 COL20A1Q9P218 1284 aa12.54□□□□□ -0.4
CPNE6-202ENST00000460657 R3HDM2Q9Y2K5 976 aaKnown RBP12.54□□□□□ -0.4
CPNE6-202ENST00000460657 DOT1LQ8TEK3 1739 aa12.54□□□□□ -0.4
CPNE6-202ENST00000460657 PMM2O15305 246 aa12.54□□□□□ -0.4
CPNE6-202ENST00000460657 UNC5CO95185 931 aa12.54□□□□□ -0.4
CPNE6-202ENST00000460657 ITGAVP06756 1048 aa12.54□□□□□ -0.4
CPNE6-202ENST00000460657 KDELR1P24390 212 aa12.54□□□□□ -0.4
CPNE6-202ENST00000460657 MIPP30301 263 aa12.54□□□□□ -0.4
CPNE6-202ENST00000460657 PEX5P50542 639 aa12.54□□□□□ -0.4
CPNE6-202ENST00000460657 KCNJ2P63252 427 aa12.54□□□□□ -0.4
CPNE6-202ENST00000460657 DCAF12L1Q5VU92 463 aa12.54□□□□□ -0.4
CPNE6-202ENST00000460657 CCDC117Q8IWD4 279 aaPredicted RBP12.54□□□□□ -0.4
CPNE6-202ENST00000460657 OR5B17Q8NGF7 314 aa12.54□□□□□ -0.4
CPNE6-202ENST00000460657 TFB1MQ8WVM0 346 aaKnown RBP12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms