RNA–Protein interactions for RNA: ENST00000460573.5

C9orf3-209, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 443 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-209ENST00000460573 BPIFB4P59827 614 aa23.79■■□□□ 1.4
C9orf3-209ENST00000460573 POLR2FP61218 127 aaKnown RBP23.79■■□□□ 1.4
C9orf3-209ENST00000460573 PTPN21Q16825 1174 aa23.79■■□□□ 1.4
C9orf3-209ENST00000460573 PABPC1LQ4VXU2 614 aaKnown RBP23.79■■□□□ 1.4
C9orf3-209ENST00000460573 CYP4A22Q5TCH4 519 aa23.79■■□□□ 1.4
C9orf3-209ENST00000460573 ANKRD52Q8NB46 1076 aa23.79■■□□□ 1.4
C9orf3-209ENST00000460573 ACSF2Q96CM8 615 aaPredicted RBP23.79■■□□□ 1.4
C9orf3-209ENST00000460573 CORO1BQ9BR76 489 aa23.79■■□□□ 1.4
C9orf3-209ENST00000460573 ASAH2Q9NR71 780 aa23.79■■□□□ 1.4
C9orf3-209ENST00000460573 IFNKQ9P0W0 207 aa23.79■■□□□ 1.4
C9orf3-209ENST00000460573 HESX1Q9UBX0 185 aa23.79■■□□□ 1.4
C9orf3-209ENST00000460573 AJAP1Q9UKB5 411 aaPredicted RBP23.79■■□□□ 1.4
C9orf3-209ENST00000460573 CLUHO75153 1309 aa23.79■■□□□ 1.4
C9orf3-209ENST00000460573 PTPRDP23468 1912 aa23.78■■□□□ 1.4
C9orf3-209ENST00000460573 F8VP50 259 aa23.78■■□□□ 1.4
C9orf3-209ENST00000460573 FOXN3O00409 490 aaPredicted RBP23.78■■□□□ 1.4
C9orf3-209ENST00000460573 ZNF197O14709 1029 aa23.78■■□□□ 1.4
C9orf3-209ENST00000460573 MED7O43513 233 aa23.78■■□□□ 1.4
C9orf3-209ENST00000460573 RHOP08100 348 aa23.78■■□□□ 1.4
C9orf3-209ENST00000460573 EPHA5P54756 1037 aa23.78■■□□□ 1.4
C9orf3-209ENST00000460573 SIGLEC14Q08ET2 396 aa23.78■■□□□ 1.4
C9orf3-209ENST00000460573 CNGA2Q16280 664 aa23.78■■□□□ 1.4
C9orf3-209ENST00000460573 FAM71AQ8IYT1 594 aa23.78■■□□□ 1.4
C9orf3-209ENST00000460573 GIPC2Q8TF65 315 aa23.78■■□□□ 1.4
C9orf3-209ENST00000460573 DUSP16Q9BY84 665 aa23.78■■□□□ 1.4
C9orf3-209ENST00000460573 PNPLA8Q9NP80 782 aa23.78■■□□□ 1.4
C9orf3-209ENST00000460573 UXTQ9UBK9 157 aaPredicted RBP23.78■■□□□ 1.4
C9orf3-209ENST00000460573 C2CD4DB7Z1M9 353 aa23.77■■□□□ 1.4
C9orf3-209ENST00000460573 O00370 1275 aa23.77■■□□□ 1.4
C9orf3-209ENST00000460573 MICAL2O94851 1124 aa23.77■■□□□ 1.4
C9orf3-209ENST00000460573 NPR3P17342 541 aa23.77■■□□□ 1.4
C9orf3-209ENST00000460573 GPR15P49685 360 aa23.77■■□□□ 1.4
C9orf3-209ENST00000460573 PTK2Q05397 1052 aa23.77■■□□□ 1.4
C9orf3-209ENST00000460573 MEA1Q16626 185 aa23.77■■□□□ 1.4
C9orf3-209ENST00000460573 LCLAT1Q6UWP7 414 aa23.77■■□□□ 1.4
C9orf3-209ENST00000460573 CLEC20AQ6ZU45 233 aa23.77■■□□□ 1.4
C9orf3-209ENST00000460573 DENND5BQ6ZUT9 1274 aa23.77■■□□□ 1.4
C9orf3-209ENST00000460573 PDZD4Q76G19 769 aaPredicted RBP23.77■■□□□ 1.4
C9orf3-209ENST00000460573 PLCD3Q8N3E9 789 aa23.77■■□□□ 1.4
C9orf3-209ENST00000460573 TRMT2BQ96GJ1 504 aaKnown RBP23.77■■□□□ 1.4
C9orf3-209ENST00000460573 SPAG5Q96R06 1193 aa23.77■■□□□ 1.4
C9orf3-209ENST00000460573 SMOQ99835 787 aa23.77■■□□□ 1.4
C9orf3-209ENST00000460573 UBXN6Q9BZV1 441 aa23.77■■□□□ 1.4
C9orf3-209ENST00000460573 GPR88Q9GZN0 384 aa23.77■■□□□ 1.4
C9orf3-209ENST00000460573 HCFC1R1Q9NWW0 138 aa23.77■■□□□ 1.4
C9orf3-209ENST00000460573 COMMD8Q9NX08 183 aa23.77■■□□□ 1.4
C9orf3-209ENST00000460573 TSPAN16Q9UKR8 245 aa23.77■■□□□ 1.4
C9orf3-209ENST00000460573 USTQ9Y2C2 406 aa23.77■■□□□ 1.4
C9orf3-209ENST00000460573 SLC38A8A6NNN8 435 aa23.76■■□□□ 1.39
C9orf3-209ENST00000460573 F8VZ95 297 aa23.76■■□□□ 1.39
C9orf3-209ENST00000460573 FSHRP23945 695 aa23.76■■□□□ 1.39
C9orf3-209ENST00000460573 GNA15P30679 374 aa23.76■■□□□ 1.39
C9orf3-209ENST00000460573 CACNA2D1P54289 1103 aa23.76■■□□□ 1.39
C9orf3-209ENST00000460573 BCAT1P54687 386 aa23.76■■□□□ 1.39
C9orf3-209ENST00000460573 MTMR3Q13615 1198 aa23.76■■□□□ 1.39
C9orf3-209ENST00000460573 SDHAF4Q5VUM1 108 aa23.76■■□□□ 1.39
C9orf3-209ENST00000460573 CACNA2D4Q7Z3S7 1137 aa23.76■■□□□ 1.39
C9orf3-209ENST00000460573 GAS2L3Q86XJ1 694 aa23.76■■□□□ 1.39
C9orf3-209ENST00000460573 FEZF2Q8TBJ5 459 aa23.76■■□□□ 1.39
C9orf3-209ENST00000460573 GPR152Q8TDT2 470 aa23.76■■□□□ 1.39
C9orf3-209ENST00000460573 TFAP2BQ92481 460 aa23.76■■□□□ 1.39
C9orf3-209ENST00000460573 IQCDQ96DY2 449 aa23.76■■□□□ 1.39
C9orf3-209ENST00000460573 MYRFLQ96LU7 910 aa23.76■■□□□ 1.39
C9orf3-209ENST00000460573 KCNK16Q96T55 309 aa23.76■■□□□ 1.39
C9orf3-209ENST00000460573 NUP58Q9BVL2 599 aa23.76■■□□□ 1.39
C9orf3-209ENST00000460573 LRRC3Q9BY71 257 aa23.76■■□□□ 1.39
C9orf3-209ENST00000460573 EDEM3Q9BZQ6 932 aa23.76■■□□□ 1.39
C9orf3-209ENST00000460573 RBSNQ9H1K0 784 aa23.76■■□□□ 1.39
C9orf3-209ENST00000460573 NLRC4Q9NPP4 1024 aa23.76■■□□□ 1.39
C9orf3-209ENST00000460573 TMEM30AQ9NV96 361 aa23.76■■□□□ 1.39
C9orf3-209ENST00000460573 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP23.76■■□□□ 1.39
C9orf3-209ENST00000460573 WDR3Q9UNX4 943 aaKnown RBP eCLIP23.76■■□□□ 1.39
C9orf3-209ENST00000460573 C2orf16Q68DN1 1984 aa23.75■■□□□ 1.39
C9orf3-209ENST00000460573 EPHB6O15197 1021 aa23.75■■□□□ 1.39
C9orf3-209ENST00000460573 CYP26A1O43174 497 aa23.75■■□□□ 1.39
C9orf3-209ENST00000460573 RTN3O95197 1032 aaPredicted RBP23.75■■□□□ 1.39
C9orf3-209ENST00000460573 HMGA1P17096 107 aaKnown RBP23.75■■□□□ 1.39
C9orf3-209ENST00000460573 CLCN1P35523 988 aa23.75■■□□□ 1.39
C9orf3-209ENST00000460573 PBX1P40424 430 aa23.75■■□□□ 1.39
C9orf3-209ENST00000460573 STAT1P42224 750 aa23.75■■□□□ 1.39
C9orf3-209ENST00000460573 MAP3K7CLP57077 242 aa23.75■■□□□ 1.39
C9orf3-209ENST00000460573 JAM2P57087 298 aa23.75■■□□□ 1.39
C9orf3-209ENST00000460573 GOLGA7BQ2TAP0 167 aa23.75■■□□□ 1.39
C9orf3-209ENST00000460573 FIGNQ5HY92 759 aa23.75■■□□□ 1.39
C9orf3-209ENST00000460573 TMC8Q8IU68 726 aa23.75■■□□□ 1.39
C9orf3-209ENST00000460573 FMNL3Q8IVF7 1028 aa23.75■■□□□ 1.39
C9orf3-209ENST00000460573 NUP93Q8N1F7 819 aa23.75■■□□□ 1.39
C9orf3-209ENST00000460573 ZMIZ2Q8NF64 920 aa23.75■■□□□ 1.39
C9orf3-209ENST00000460573 ZNF606Q8WXB4 792 aa23.75■■□□□ 1.39
C9orf3-209ENST00000460573 XPO4Q9C0E2 1151 aaKnown RBP23.75■■□□□ 1.39
C9orf3-209ENST00000460573 MYO6Q9UM54 1294 aa23.75■■□□□ 1.39
C9orf3-209ENST00000460573 BEST1O76090 585 aa23.74■■□□□ 1.39
C9orf3-209ENST00000460573 SETSIPP0DME0 302 aa23.74■■□□□ 1.39
C9orf3-209ENST00000460573 BRD2P25440 801 aaKnown RBP23.74■■□□□ 1.39
C9orf3-209ENST00000460573 CDC25CP30307 473 aa23.74■■□□□ 1.39
C9orf3-209ENST00000460573 SOX5P35711 763 aa23.74■■□□□ 1.39
C9orf3-209ENST00000460573 NTHL1P78549 312 aa23.74■■□□□ 1.39
C9orf3-209ENST00000460573 BST2Q10589 180 aaKnown RBP23.74■■□□□ 1.39
C9orf3-209ENST00000460573 PRSS36Q5K4E3 855 aa23.74■■□□□ 1.39
C9orf3-209ENST00000460573 SARM1Q6SZW1 724 aa23.74■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms