RNA–Protein interactions for RNA: ENST00000460235.1

HDAC4-206, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 343 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-206ENST00000460235 TTYH1Q9H313 450 aaPredicted RBP13.03□□□□□ -0.32
HDAC4-206ENST00000460235 SFXN1Q9H9B4 322 aa13.03□□□□□ -0.32
HDAC4-206ENST00000460235 ST7Q9NRC1 585 aa13.03□□□□□ -0.32
HDAC4-206ENST00000460235 ADAMTS1Q9UHI8 967 aa13.03□□□□□ -0.32
HDAC4-206ENST00000460235 ZMYM5Q9UJ78 669 aa13.03□□□□□ -0.32
HDAC4-206ENST00000460235 NME7Q9Y5B8 376 aa13.03□□□□□ -0.32
HDAC4-206ENST00000460235 INSL5Q9Y5Q6 135 aa13.03□□□□□ -0.32
HDAC4-206ENST00000460235 EPOPA6NHQ4 379 aa13.02□□□□□ -0.33
HDAC4-206ENST00000460235 F8VP50 259 aa13.02□□□□□ -0.33
HDAC4-206ENST00000460235 RFXAPO00287 272 aa13.02□□□□□ -0.33
HDAC4-206ENST00000460235 CLDN5O00501 218 aa13.02□□□□□ -0.33
HDAC4-206ENST00000460235 ADAM12O43184 909 aa13.02□□□□□ -0.33
HDAC4-206ENST00000460235 HCRTO43612 131 aa13.02□□□□□ -0.33
HDAC4-206ENST00000460235 CSPG5O95196 566 aa13.02□□□□□ -0.33
HDAC4-206ENST00000460235 CYP1A1P04798 512 aaPredicted RBP13.02□□□□□ -0.33
HDAC4-206ENST00000460235 FECHP22830 423 aa13.02□□□□□ -0.33
HDAC4-206ENST00000460235 GPD2P43304 727 aa13.02□□□□□ -0.33
HDAC4-206ENST00000460235 PSEN1P49768 467 aa13.02□□□□□ -0.33
HDAC4-206ENST00000460235 FMO1Q01740 532 aa13.02□□□□□ -0.33
HDAC4-206ENST00000460235 C1QBPQ07021 282 aaKnown RBP13.02□□□□□ -0.33
HDAC4-206ENST00000460235 PDE4CQ08493 712 aa13.02□□□□□ -0.33
HDAC4-206ENST00000460235 CLEC16AQ2KHT3 1053 aa13.02□□□□□ -0.33
HDAC4-206ENST00000460235 PKDCCQ504Y2 493 aa13.02□□□□□ -0.33
HDAC4-206ENST00000460235 HGSNATQ68CP4 663 aa13.02□□□□□ -0.33
HDAC4-206ENST00000460235 ACAD10Q6JQN1 1059 aa13.02□□□□□ -0.33
HDAC4-206ENST00000460235 ALKBH5Q6P6C2 394 aaKnown RBP13.02□□□□□ -0.33
HDAC4-206ENST00000460235 WDR59Q6PJI9 974 aa13.02□□□□□ -0.33
HDAC4-206ENST00000460235 CLEC20AQ6ZU45 233 aa13.02□□□□□ -0.33
HDAC4-206ENST00000460235 TOGARAM2Q6ZUX3 1019 aa13.02□□□□□ -0.33
HDAC4-206ENST00000460235 ZNF571Q7Z3V5 609 aaPredicted RBP13.02□□□□□ -0.33
HDAC4-206ENST00000460235 TADA2BQ86TJ2 420 aa13.02□□□□□ -0.33
HDAC4-206ENST00000460235 CMASQ8NFW8 434 aaPredicted RBP13.02□□□□□ -0.33
HDAC4-206ENST00000460235 SLC7A14Q8TBB6 771 aa13.02□□□□□ -0.33
HDAC4-206ENST00000460235 UBA3Q8TBC4 463 aa13.02□□□□□ -0.33
HDAC4-206ENST00000460235 SLC35F5Q8WV83 523 aa13.02□□□□□ -0.33
HDAC4-206ENST00000460235 OVCA2Q8WZ82 227 aa13.02□□□□□ -0.33
HDAC4-206ENST00000460235 SECISBP2LQ93073 1101 aaKnown RBP13.02□□□□□ -0.33
HDAC4-206ENST00000460235 C18orf8Q96DM3 657 aa13.02□□□□□ -0.33
HDAC4-206ENST00000460235 PPP1R13BQ96KQ4 1090 aa13.02□□□□□ -0.33
HDAC4-206ENST00000460235 CALR3Q96L12 384 aaKnown RBP13.02□□□□□ -0.33
HDAC4-206ENST00000460235 CDK5RAP1Q96SZ6 601 aaKnown RBP13.02□□□□□ -0.33
HDAC4-206ENST00000460235 RHOBTB2Q9BYZ6 727 aa13.02□□□□□ -0.33
HDAC4-206ENST00000460235 PIDD1Q9HB75 910 aa13.02□□□□□ -0.33
HDAC4-206ENST00000460235 CNGB3Q9NQW8 809 aa13.02□□□□□ -0.33
HDAC4-206ENST00000460235 MAN1C1Q9NR34 630 aa13.02□□□□□ -0.33
HDAC4-206ENST00000460235 TMLHEQ9NVH6 421 aa13.02□□□□□ -0.33
HDAC4-206ENST00000460235 ARHGAP20Q9P2F6 1191 aa13.02□□□□□ -0.33
HDAC4-206ENST00000460235 LCMT1Q9UIC8 334 aa13.02□□□□□ -0.33
HDAC4-206ENST00000460235 SLC27A5Q9Y2P5 690 aa13.02□□□□□ -0.33
HDAC4-206ENST00000460235 YIPF1Q9Y548 306 aa13.02□□□□□ -0.33
HDAC4-206ENST00000460235 HCFC2Q9Y5Z7 792 aa13.02□□□□□ -0.33
HDAC4-206ENST00000460235 MTCH2Q9Y6C9 303 aa13.02□□□□□ -0.33
HDAC4-206ENST00000460235 EPN1Q9Y6I3 576 aaPredicted RBP13.02□□□□□ -0.33
HDAC4-206ENST00000460235 PLXNA4Q9HCM2 1894 aa13.02□□□□□ -0.33
HDAC4-206ENST00000460235 VWA8A3KMH1 1905 aa13.01□□□□□ -0.33
HDAC4-206ENST00000460235 ZNF197O14709 1029 aa13.01□□□□□ -0.33
HDAC4-206ENST00000460235 PER2O15055 1255 aa13.01□□□□□ -0.33
HDAC4-206ENST00000460235 PTPN2P17706 415 aa13.01□□□□□ -0.33
HDAC4-206ENST00000460235 YWHAQP27348 245 aa13.01□□□□□ -0.33
HDAC4-206ENST00000460235 KIF11P52732 1056 aa13.01□□□□□ -0.33
HDAC4-206ENST00000460235 NOMO3P69849 1222 aa13.01□□□□□ -0.33
HDAC4-206ENST00000460235 CENPCQ03188 943 aa13.01□□□□□ -0.33
HDAC4-206ENST00000460235 TWF1Q12792 350 aa13.01□□□□□ -0.33
HDAC4-206ENST00000460235 TCEAL5Q5H9L2 206 aa13.01□□□□□ -0.33
HDAC4-206ENST00000460235 EFHC1Q5JVL4 640 aa13.01□□□□□ -0.33
HDAC4-206ENST00000460235 CCDC122Q5T0U0 273 aa13.01□□□□□ -0.33
HDAC4-206ENST00000460235 CYP4A22Q5TCH4 519 aa13.01□□□□□ -0.33
HDAC4-206ENST00000460235 NAA35Q5VZE5 725 aa13.01□□□□□ -0.33
HDAC4-206ENST00000460235 CES5AQ6NT32 575 aa13.01□□□□□ -0.33
HDAC4-206ENST00000460235 PAQR9Q6ZVX9 377 aa13.01□□□□□ -0.33
HDAC4-206ENST00000460235 TMEM110Q86TL2 294 aa13.01□□□□□ -0.33
HDAC4-206ENST00000460235 PIGZQ86VD9 579 aa13.01□□□□□ -0.33
HDAC4-206ENST00000460235 TTC30AQ86WT1 665 aa13.01□□□□□ -0.33
HDAC4-206ENST00000460235 PHF13Q86YI8 300 aaPredicted RBP13.01□□□□□ -0.33
HDAC4-206ENST00000460235 SCML4Q8N228 414 aa13.01□□□□□ -0.33
HDAC4-206ENST00000460235 DEFB123Q8N688 67 aa13.01□□□□□ -0.33
HDAC4-206ENST00000460235 STKLD1Q8NE28 680 aa13.01□□□□□ -0.33
HDAC4-206ENST00000460235 SLC20A1Q8WUM9 679 aa13.01□□□□□ -0.33
HDAC4-206ENST00000460235 IRGQQ8WZA9 623 aa13.01□□□□□ -0.33
HDAC4-206ENST00000460235 TRIM44Q96DX7 344 aaPredicted RBP13.01□□□□□ -0.33
HDAC4-206ENST00000460235 LRCH3Q96II8 777 aa13.01□□□□□ -0.33
HDAC4-206ENST00000460235 SLC4A5Q9BY07 1137 aa13.01□□□□□ -0.33
HDAC4-206ENST00000460235 IGFLR1Q9H665 355 aa13.01□□□□□ -0.33
HDAC4-206ENST00000460235 MRPL47Q9HD33 250 aaKnown RBP13.01□□□□□ -0.33
HDAC4-206ENST00000460235 ADAM22Q9P0K1 906 aa13.01□□□□□ -0.33
HDAC4-206ENST00000460235 INTUQ9ULD6 942 aa13.01□□□□□ -0.33
HDAC4-206ENST00000460235 TSC2P49815 1807 aa13.01□□□□□ -0.33
HDAC4-206ENST00000460235 SOBPA7XYQ1 873 aa13□□□□□ -0.33
HDAC4-206ENST00000460235 EIF3CLB5ME19 914 aaKnown RBP13□□□□□ -0.33
HDAC4-206ENST00000460235 SOX1O00570 391 aaPredicted RBP13□□□□□ -0.33
HDAC4-206ENST00000460235 CCP110O43303 1012 aa13□□□□□ -0.33
HDAC4-206ENST00000460235 GLI1P08151 1106 aa13□□□□□ -0.33
HDAC4-206ENST00000460235 H2AFZP0C0S5 128 aa13□□□□□ -0.33
HDAC4-206ENST00000460235 FOSL2P15408 326 aa13□□□□□ -0.33
HDAC4-206ENST00000460235 CHRNB2P17787 502 aa13□□□□□ -0.33
HDAC4-206ENST00000460235 CDC25CP30307 473 aa13□□□□□ -0.33
HDAC4-206ENST00000460235 SCNN1AP37088 669 aa13□□□□□ -0.33
HDAC4-206ENST00000460235 ITIH3Q06033 890 aa13□□□□□ -0.33
HDAC4-206ENST00000460235 PDCLQ13371 301 aa13□□□□□ -0.33
HDAC4-206ENST00000460235 ZNF268Q14587 947 aaPredicted RBP13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms