RNA–Protein interactions for RNA: ENST00000460170.2

PTPRU-205, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 1 (best) BASIC

Gene PTPRU, Length 5,337 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-205ENST00000460170 PPME1Q9Y570 386 aa15.34■□□□□ 0.05
PTPRU-205ENST00000460170 LOC100653049A0A140TA62 436 aa15.34■□□□□ 0.05
PTPRU-205ENST00000460170 KRT34O76011 436 aa15.34■□□□□ 0.05
PTPRU-205ENST00000460170 VTNP04004 478 aa15.34■□□□□ 0.05
PTPRU-205ENST00000460170 SPATA31C1P0DKV0 1188 aa15.34■□□□□ 0.05
PTPRU-205ENST00000460170 IFI35P80217 286 aaPredicted RBP15.34■□□□□ 0.05
PTPRU-205ENST00000460170 SPDYCQ5MJ68 293 aa15.34■□□□□ 0.05
PTPRU-205ENST00000460170 SLC9A9Q8IVB4 645 aa15.34■□□□□ 0.05
PTPRU-205ENST00000460170 BRSK2Q8IWQ3 736 aa15.34■□□□□ 0.05
PTPRU-205ENST00000460170 HSD17B14Q9BPX1 270 aa15.34■□□□□ 0.05
PTPRU-205ENST00000460170 MRPL1Q9BYD6 325 aaKnown RBP15.34■□□□□ 0.05
PTPRU-205ENST00000460170 CD248Q9HCU0 757 aa15.34■□□□□ 0.05
PTPRU-205ENST00000460170 MYBL2P10244 700 aa15.34■□□□□ 0.05
PTPRU-205ENST00000460170 BCAT1P54687 386 aa15.34■□□□□ 0.05
PTPRU-205ENST00000460170 MED21Q13503 144 aa15.34■□□□□ 0.05
PTPRU-205ENST00000460170 KIZQ2M2Z5 673 aa15.34■□□□□ 0.05
PTPRU-205ENST00000460170 DENND5BQ6ZUT9 1274 aa15.34■□□□□ 0.05
PTPRU-205ENST00000460170 LNX1Q8TBB1 728 aaPredicted RBP15.34■□□□□ 0.05
PTPRU-205ENST00000460170 AKT1S1Q96B36 256 aa15.34■□□□□ 0.05
PTPRU-205ENST00000460170 ASIC4Q96FT7 647 aa15.34■□□□□ 0.05
PTPRU-205ENST00000460170 SLC24A3Q9HC58 644 aa15.34■□□□□ 0.05
PTPRU-205ENST00000460170 HAO1Q9UJM8 370 aa15.34■□□□□ 0.05
PTPRU-205ENST00000460170 SDR42E2A6NKP2 422 aa15.34■□□□□ 0.05
PTPRU-205ENST00000460170 AIM2O14862 343 aa15.34■□□□□ 0.05
PTPRU-205ENST00000460170 UBOX5O94941 541 aa15.34■□□□□ 0.05
PTPRU-205ENST00000460170 TGFB2P61812 414 aa15.34■□□□□ 0.05
PTPRU-205ENST00000460170 GTF2BQ00403 316 aa15.34■□□□□ 0.05
PTPRU-205ENST00000460170 PCSK7Q16549 785 aa15.34■□□□□ 0.05
PTPRU-205ENST00000460170 LRRC36Q1X8D7 754 aa15.34■□□□□ 0.05
PTPRU-205ENST00000460170 HYIQ5T013 277 aa15.34■□□□□ 0.05
PTPRU-205ENST00000460170 POTEAQ6S8J7 498 aa15.34■□□□□ 0.05
PTPRU-205ENST00000460170 MFSD7Q6UXD7 560 aa15.34■□□□□ 0.05
PTPRU-205ENST00000460170 GLRA3O75311 464 aa15.33■□□□□ 0.05
PTPRU-205ENST00000460170 TADA2AO75478 443 aa15.33■□□□□ 0.05
PTPRU-205ENST00000460170 ECM1Q16610 540 aa15.33■□□□□ 0.05
PTPRU-205ENST00000460170 TMEM259Q4ZIN3 620 aa15.33■□□□□ 0.05
PTPRU-205ENST00000460170 TLR2O60603 784 aa15.33■□□□□ 0.04
PTPRU-205ENST00000460170 SLURP2P0DP57 97 aa15.33■□□□□ 0.04
PTPRU-205ENST00000460170 ARHGDIAP52565 204 aa15.33■□□□□ 0.04
PTPRU-205ENST00000460170 TMA16Q96EY4 203 aaKnown RBP15.33■□□□□ 0.04
PTPRU-205ENST00000460170 CPB2Q96IY4 423 aa15.33■□□□□ 0.04
PTPRU-205ENST00000460170 MRGBPQ9NV56 204 aa15.33■□□□□ 0.04
PTPRU-205ENST00000460170 NDFIP2Q9NV92 336 aa15.33■□□□□ 0.04
PTPRU-205ENST00000460170 ANGPT2O15123 496 aa15.33■□□□□ 0.04
PTPRU-205ENST00000460170 ANP32DO95626 131 aa15.33■□□□□ 0.04
PTPRU-205ENST00000460170 TGM2P21980 687 aa15.33■□□□□ 0.04
PTPRU-205ENST00000460170 IL10P22301 178 aa15.33■□□□□ 0.04
PTPRU-205ENST00000460170 LAMB3Q13751 1172 aa15.33■□□□□ 0.04
PTPRU-205ENST00000460170 CNGA3Q16281 694 aa15.33■□□□□ 0.04
PTPRU-205ENST00000460170 BMT2Q1RMZ1 405 aa15.33■□□□□ 0.04
PTPRU-205ENST00000460170 TTMPQ5BVD1 217 aa15.33■□□□□ 0.04
PTPRU-205ENST00000460170 IRF2BP2Q7Z5L9 587 aa15.33■□□□□ 0.04
PTPRU-205ENST00000460170 LINC00523Q86TU6 105 aa15.33■□□□□ 0.04
PTPRU-205ENST00000460170 SH3TC2Q8TF17 1288 aa15.33■□□□□ 0.04
PTPRU-205ENST00000460170 ZBTB45Q96K62 511 aaPredicted RBP15.33■□□□□ 0.04
PTPRU-205ENST00000460170 ACO1P21399 889 aaKnown RBP15.33■□□□□ 0.04
PTPRU-205ENST00000460170 PDAP1Q13442 181 aaKnown RBP15.33■□□□□ 0.04
PTPRU-205ENST00000460170 ZNF268Q14587 947 aaPredicted RBP15.33■□□□□ 0.04
PTPRU-205ENST00000460170 C16orf89Q6UX73 402 aa15.33■□□□□ 0.04
PTPRU-205ENST00000460170 NINJ2Q9NZG7 142 aa15.33■□□□□ 0.04
PTPRU-205ENST00000460170 AP4E1Q9UPM8 1137 aa15.33■□□□□ 0.04
PTPRU-205ENST00000460170 PPP2R3BQ9Y5P8 575 aa15.33■□□□□ 0.04
PTPRU-205ENST00000460170 PEAK1Q9H792 1746 aa15.33■□□□□ 0.04
PTPRU-205ENST00000460170 KCNA2P16389 499 aa15.32■□□□□ 0.04
PTPRU-205ENST00000460170 HADHAP40939 763 aa15.32■□□□□ 0.04
PTPRU-205ENST00000460170 VEPH1Q14D04 833 aa15.32■□□□□ 0.04
PTPRU-205ENST00000460170 TBCCQ15814 346 aa15.32■□□□□ 0.04
PTPRU-205ENST00000460170 MREGQ8N565 214 aa15.32■□□□□ 0.04
PTPRU-205ENST00000460170 CHST7Q9NS84 486 aa15.32■□□□□ 0.04
PTPRU-205ENST00000460170 PECAM1P16284 738 aaPredicted RBP15.32■□□□□ 0.04
PTPRU-205ENST00000460170 LY6KQ17RY6 165 aa15.32■□□□□ 0.04
PTPRU-205ENST00000460170 ANGPTL8Q6UXH0 198 aa15.32■□□□□ 0.04
PTPRU-205ENST00000460170 SPDYE1Q8NFV5 336 aaPredicted RBP15.32■□□□□ 0.04
PTPRU-205ENST00000460170 WDCPQ9H6R7 721 aa15.32■□□□□ 0.04
PTPRU-205ENST00000460170 CAMSAP3Q9P1Y5 1249 aaPredicted RBP15.32■□□□□ 0.04
PTPRU-205ENST00000460170 CDYLQ9Y232 598 aa15.32■□□□□ 0.04
PTPRU-205ENST00000460170 CSDE1O75534 798 aaKnown RBP15.32■□□□□ 0.04
PTPRU-205ENST00000460170 AP1G2O75843 785 aa15.32■□□□□ 0.04
PTPRU-205ENST00000460170 HMBSP08397 361 aa15.32■□□□□ 0.04
PTPRU-205ENST00000460170 CPT1AP50416 773 aa15.32■□□□□ 0.04
PTPRU-205ENST00000460170 GNASQ5JWF2 1037 aa15.32■□□□□ 0.04
PTPRU-205ENST00000460170 FOXR1Q6PIV2 292 aa15.32■□□□□ 0.04
PTPRU-205ENST00000460170 GLB1LQ6UWU2 654 aa15.32■□□□□ 0.04
PTPRU-205ENST00000460170 SLFN11Q7Z7L1 901 aa15.32■□□□□ 0.04
PTPRU-205ENST00000460170 SETD3Q86TU7 594 aaPredicted RBP15.32■□□□□ 0.04
PTPRU-205ENST00000460170 VSIG10LQ86VR7 867 aa15.32■□□□□ 0.04
PTPRU-205ENST00000460170 FAM131BQ86XD5 332 aa15.32■□□□□ 0.04
PTPRU-205ENST00000460170 DCP1BQ8IZD4 617 aaKnown RBP15.32■□□□□ 0.04
PTPRU-205ENST00000460170 DLG5Q8TDM6 1919 aa15.32■□□□□ 0.04
PTPRU-205ENST00000460170 ARHGAP10A1A4S6 786 aa15.32■□□□□ 0.04
PTPRU-205ENST00000460170 MARSP56192 900 aaKnown RBP15.32■□□□□ 0.04
PTPRU-205ENST00000460170 TRIP10Q15642 601 aa15.32■□□□□ 0.04
PTPRU-205ENST00000460170 RNF168Q8IYW5 571 aaPredicted RBP15.32■□□□□ 0.04
PTPRU-205ENST00000460170 SLC25A41Q8N5S1 370 aa15.32■□□□□ 0.04
PTPRU-205ENST00000460170 PBXIP1Q96AQ6 731 aa15.32■□□□□ 0.04
PTPRU-205ENST00000460170 A1CFQ9NQ94 594 aaKnown RBP15.32■□□□□ 0.04
PTPRU-205ENST00000460170 BARX2Q9UMQ3 279 aaPredicted RBP15.32■□□□□ 0.04
PTPRU-205ENST00000460170 ACKR2O00590 384 aa15.31■□□□□ 0.04
PTPRU-205ENST00000460170 TM9SF1O15321 606 aa15.31■□□□□ 0.04
PTPRU-205ENST00000460170 ANXA9O76027 345 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms