RNA–Protein interactions for RNA: ENST00000459994.2

SDF4-204, Transcript of stromal cell derived factor 4, humanhuman

TSL 5

Gene SDF4, Length 604 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-204ENST00000459994 ATXN3LQ9H3M9 355 aa16.61■□□□□ 0.25
SDF4-204ENST00000459994 SLITRK6Q9H5Y7 841 aa16.61■□□□□ 0.25
SDF4-204ENST00000459994 TRPV4Q9HBA0 871 aa16.61■□□□□ 0.25
SDF4-204ENST00000459994 DDX43Q9NXZ2 648 aaKnown RBP16.61■□□□□ 0.25
SDF4-204ENST00000459994 SIK3Q9Y2K2 1263 aa16.61■□□□□ 0.25
SDF4-204ENST00000459994 R3HCC1Q9Y3T6 440 aaKnown RBP16.61■□□□□ 0.25
SDF4-204ENST00000459994 NME7Q9Y5B8 376 aa16.61■□□□□ 0.25
SDF4-204ENST00000459994 SNX9Q9Y5X1 595 aa16.61■□□□□ 0.25
SDF4-204ENST00000459994 ATG2BQ96BY7 2078 aa16.6■□□□□ 0.25
SDF4-204ENST00000459994 PRR23AA6NEV1 266 aa16.6■□□□□ 0.25
SDF4-204ENST00000459994 FAM170BA6NMN3 283 aa16.6■□□□□ 0.25
SDF4-204ENST00000459994 ARNTLO00327 626 aa16.6■□□□□ 0.25
SDF4-204ENST00000459994 ATP2C2O75185 946 aa16.6■□□□□ 0.25
SDF4-204ENST00000459994 PRAMEF12O95522 483 aa16.6■□□□□ 0.25
SDF4-204ENST00000459994 ASS1P00966 412 aaKnown RBP16.6■□□□□ 0.25
SDF4-204ENST00000459994 PON1P27169 355 aa16.6■□□□□ 0.25
SDF4-204ENST00000459994 PNPLA4P41247 253 aa16.6■□□□□ 0.25
SDF4-204ENST00000459994 PIK3CAP42336 1068 aa16.6■□□□□ 0.25
SDF4-204ENST00000459994 SYCP1Q15431 976 aa16.6■□□□□ 0.25
SDF4-204ENST00000459994 SGSM1Q2NKQ1 1148 aa16.6■□□□□ 0.25
SDF4-204ENST00000459994 GPR158Q5T848 1215 aa16.6■□□□□ 0.25
SDF4-204ENST00000459994 ZNF687Q8N1G0 1237 aa16.6■□□□□ 0.25
SDF4-204ENST00000459994 LEMD2Q8NC56 503 aa16.6■□□□□ 0.25
SDF4-204ENST00000459994 KBTBD7Q8WVZ9 684 aa16.6■□□□□ 0.25
SDF4-204ENST00000459994 ELMO3Q96BJ8 720 aa16.6■□□□□ 0.25
SDF4-204ENST00000459994 TRMT61BQ9BVS5 477 aaKnown RBP16.6■□□□□ 0.25
SDF4-204ENST00000459994 INTS2Q9H0H0 1204 aaKnown RBP16.6■□□□□ 0.25
SDF4-204ENST00000459994 SMG9Q9H0W8 520 aaKnown RBP16.6■□□□□ 0.25
SDF4-204ENST00000459994 IRF2BPLQ9H1B7 796 aa16.6■□□□□ 0.25
SDF4-204ENST00000459994 BRD9Q9H8M2 597 aa16.6■□□□□ 0.25
SDF4-204ENST00000459994 VRTNQ9H8Y1 702 aa16.6■□□□□ 0.25
SDF4-204ENST00000459994 GDAP2Q9NXN4 497 aa16.6■□□□□ 0.25
SDF4-204ENST00000459994 GCNT4Q9P109 453 aa16.6■□□□□ 0.25
SDF4-204ENST00000459994 HSFX1Q9UBD0 423 aa16.6■□□□□ 0.25
SDF4-204ENST00000459994 GTF3C4Q9UKN8 822 aa16.6■□□□□ 0.25
SDF4-204ENST00000459994 R4GN57 208 aa16.6■□□□□ 0.25
SDF4-204ENST00000459994 MYH10P35580 1976 aa16.6■□□□□ 0.25
SDF4-204ENST00000459994 HMGA1P17096 107 aaKnown RBP16.59■□□□□ 0.25
SDF4-204ENST00000459994 PSMC3P17980 439 aa16.59■□□□□ 0.25
SDF4-204ENST00000459994 SLC9A1P19634 815 aa16.59■□□□□ 0.25
SDF4-204ENST00000459994 CYP2F1P24903 491 aa16.59■□□□□ 0.25
SDF4-204ENST00000459994 LMO2P25791 158 aa16.59■□□□□ 0.25
SDF4-204ENST00000459994 MYL6P60660 151 aa16.59■□□□□ 0.25
SDF4-204ENST00000459994 PFKPQ01813 784 aa16.59■□□□□ 0.25
SDF4-204ENST00000459994 WDR44Q5JSH3 913 aa16.59■□□□□ 0.25
SDF4-204ENST00000459994 INTS6LQ5JSJ4 861 aaKnown RBP16.59■□□□□ 0.25
SDF4-204ENST00000459994 DPY19L2P1Q6NXN4 242 aa16.59■□□□□ 0.25
SDF4-204ENST00000459994 ARID3BQ8IVW6 561 aaPredicted RBP16.59■□□□□ 0.25
SDF4-204ENST00000459994 MFSD6LQ8IWD5 586 aa16.59■□□□□ 0.25
SDF4-204ENST00000459994 ADGRF2Q8IZF7 708 aa16.59■□□□□ 0.25
SDF4-204ENST00000459994 CCDC150Q8NCX0 1101 aa16.59■□□□□ 0.25
SDF4-204ENST00000459994 SPPL2BQ8TCT7 592 aa16.59■□□□□ 0.25
SDF4-204ENST00000459994 FAXDC2Q96IV6 333 aa16.59■□□□□ 0.25
SDF4-204ENST00000459994 SHDQ96IW2 340 aa16.59■□□□□ 0.25
SDF4-204ENST00000459994 ZFYVE19Q96K21 471 aa16.59■□□□□ 0.25
SDF4-204ENST00000459994 XYLT2Q9H1B5 865 aa16.59■□□□□ 0.25
SDF4-204ENST00000459994 PLCB1Q9NQ66 1216 aa16.59■□□□□ 0.25
SDF4-204ENST00000459994 ASB3Q9Y575 518 aa16.59■□□□□ 0.25
SDF4-204ENST00000459994 F5P12259 2224 aa16.59■□□□□ 0.25
SDF4-204ENST00000459994 KIAA1549LQ6ZVL6 1849 aa16.59■□□□□ 0.25
SDF4-204ENST00000459994 ZFHX2Q9C0A1 2572 aaPredicted RBP16.58■□□□□ 0.25
SDF4-204ENST00000459994 CFAP54Q96N23 3096 aa16.58■□□□□ 0.24
SDF4-204ENST00000459994 MYBPHLA2RUH7 354 aa16.58■□□□□ 0.24
SDF4-204ENST00000459994 GABRDO14764 452 aa16.58■□□□□ 0.24
SDF4-204ENST00000459994 HUS1O60921 280 aa16.58■□□□□ 0.24
SDF4-204ENST00000459994 TADA3O75528 432 aa16.58■□□□□ 0.24
SDF4-204ENST00000459994 ADCY5O95622 1261 aa16.58■□□□□ 0.24
SDF4-204ENST00000459994 SP9P0CG40 484 aa16.58■□□□□ 0.24
SDF4-204ENST00000459994 SOX9P48436 509 aa16.58■□□□□ 0.24
SDF4-204ENST00000459994 TUFMP49411 452 aaKnown RBP16.58■□□□□ 0.24
SDF4-204ENST00000459994 PSMC1P62191 440 aaKnown RBP16.58■□□□□ 0.24
SDF4-204ENST00000459994 MYO1EQ12965 1108 aa16.58■□□□□ 0.24
SDF4-204ENST00000459994 DDR2Q16832 855 aa16.58■□□□□ 0.24
SDF4-204ENST00000459994 TRIM65Q6PJ69 517 aa16.58■□□□□ 0.24
SDF4-204ENST00000459994 LIMS2Q7Z4I7 341 aa16.58■□□□□ 0.24
SDF4-204ENST00000459994 C1orf210Q8IVY1 113 aa16.58■□□□□ 0.24
SDF4-204ENST00000459994 VSTM4Q8IW00 320 aa16.58■□□□□ 0.24
SDF4-204ENST00000459994 DCP1BQ8IZD4 617 aaKnown RBP16.58■□□□□ 0.24
SDF4-204ENST00000459994 TTC8Q8TAM2 541 aa16.58■□□□□ 0.24
SDF4-204ENST00000459994 RIN3Q8TB24 985 aa16.58■□□□□ 0.24
SDF4-204ENST00000459994 DNASE1L2Q92874 299 aa16.58■□□□□ 0.24
SDF4-204ENST00000459994 HPDLQ96IR7 371 aa16.58■□□□□ 0.24
SDF4-204ENST00000459994 NT5C1BQ96P26 610 aa16.58■□□□□ 0.24
SDF4-204ENST00000459994 ACBD6Q9BR61 282 aa16.58■□□□□ 0.24
SDF4-204ENST00000459994 IMPG2Q9BZV3 1241 aa16.58■□□□□ 0.24
SDF4-204ENST00000459994 NDRG2Q9UN36 371 aaKnown RBP16.58■□□□□ 0.24
SDF4-204ENST00000459994 DAAM1Q9Y4D1 1078 aa16.58■□□□□ 0.24
SDF4-204ENST00000459994 PCDHB5Q9Y5E4 795 aa16.58■□□□□ 0.24
SDF4-204ENST00000459994 ITIH6Q6UXX5 1313 aa16.58■□□□□ 0.24
SDF4-204ENST00000459994 F11P03951 625 aa16.57■□□□□ 0.24
SDF4-204ENST00000459994 CDC25BP30305 580 aa16.57■□□□□ 0.24
SDF4-204ENST00000459994 ZNF699Q32M78 642 aa16.57■□□□□ 0.24
SDF4-204ENST00000459994 SMYD5Q6GMV2 418 aa16.57■□□□□ 0.24
SDF4-204ENST00000459994 ITIH5Q86UX2 942 aa16.57■□□□□ 0.24
SDF4-204ENST00000459994 TOP6BLQ8N6T0 577 aa16.57■□□□□ 0.24
SDF4-204ENST00000459994 C2orf15Q8WU43 125 aaKnown RBP16.57■□□□□ 0.24
SDF4-204ENST00000459994 IQCDQ96DY2 449 aa16.57■□□□□ 0.24
SDF4-204ENST00000459994 FAM81BQ96LP2 452 aa16.57■□□□□ 0.24
SDF4-204ENST00000459994 MRPL45Q9BRJ2 306 aaKnown RBP16.57■□□□□ 0.24
SDF4-204ENST00000459994 LSM14BQ9BX40 385 aaKnown RBP16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms