RNA–Protein interactions for RNA: ENST00000458748.1

SCARNA2-201, small Cajal body-specific RNA 2, humanhuman

BASIC

Gene SCARNA2, Length 420 nt, Biotype scaRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA2-201ENST00000458748 SMARCD1Q96GM5 515 aa18.63■□□□□ 0.57
SCARNA2-201ENST00000458748 CEP63Q96MT8 703 aa18.63■□□□□ 0.57
SCARNA2-201ENST00000458748 SLITRK1Q96PX8 696 aa18.63■□□□□ 0.57
SCARNA2-201ENST00000458748 NIF3L1Q9GZT8 377 aa18.63■□□□□ 0.57
SCARNA2-201ENST00000458748 DPEP3Q9H4B8 488 aa18.63■□□□□ 0.57
SCARNA2-201ENST00000458748 FAM124BQ9H5Z6 455 aaPredicted RBP18.63■□□□□ 0.57
SCARNA2-201ENST00000458748 C8orf33Q9H7E9 229 aaPredicted RBP18.63■□□□□ 0.57
SCARNA2-201ENST00000458748 TRPC7Q9HCX4 862 aa18.63■□□□□ 0.57
SCARNA2-201ENST00000458748 TRPM5Q9NZQ8 1165 aa18.63■□□□□ 0.57
SCARNA2-201ENST00000458748 MTF2Q9Y483 593 aaPredicted RBP18.63■□□□□ 0.57
SCARNA2-201ENST00000458748 NCANO14594 1321 aa18.63■□□□□ 0.57
SCARNA2-201ENST00000458748 FAM186AA6NE01 2351 aa18.63■□□□□ 0.57
SCARNA2-201ENST00000458748 USP34Q70CQ2 3546 aa18.62■□□□□ 0.57
SCARNA2-201ENST00000458748 F8VP50 259 aa18.62■□□□□ 0.57
SCARNA2-201ENST00000458748 CKMP06732 381 aa18.62■□□□□ 0.57
SCARNA2-201ENST00000458748 USP17L7P0C7H9 530 aa18.62■□□□□ 0.57
SCARNA2-201ENST00000458748 CD72P21854 359 aa18.62■□□□□ 0.57
SCARNA2-201ENST00000458748 ASPAP45381 313 aa18.62■□□□□ 0.57
SCARNA2-201ENST00000458748 NDST1P52848 882 aa18.62■□□□□ 0.57
SCARNA2-201ENST00000458748 CETN1Q12798 172 aa18.62■□□□□ 0.57
SCARNA2-201ENST00000458748 CCDC142Q17RM4 750 aa18.62■□□□□ 0.57
SCARNA2-201ENST00000458748 TXNDC8Q6A555 127 aa18.62■□□□□ 0.57
SCARNA2-201ENST00000458748 ZC3H3Q8IXZ2 948 aaKnown RBP18.62■□□□□ 0.57
SCARNA2-201ENST00000458748 CRYBG2Q8N1P7 616 aa18.62■□□□□ 0.57
SCARNA2-201ENST00000458748 TRIML1Q8N9V2 468 aa18.62■□□□□ 0.57
SCARNA2-201ENST00000458748 TAS1R2Q8TE23 839 aa18.62■□□□□ 0.57
SCARNA2-201ENST00000458748 NT5C1AQ9BXI3 368 aa18.62■□□□□ 0.57
SCARNA2-201ENST00000458748 B3GNT5Q9BYG0 378 aa18.62■□□□□ 0.57
SCARNA2-201ENST00000458748 ZNF518BQ9C0D4 1074 aa18.62■□□□□ 0.57
SCARNA2-201ENST00000458748 DMAP1Q9NPF5 467 aaPredicted RBP18.62■□□□□ 0.57
SCARNA2-201ENST00000458748 TDP1Q9NUW8 608 aa18.62■□□□□ 0.57
SCARNA2-201ENST00000458748 RAB20Q9NX57 234 aa18.62■□□□□ 0.57
SCARNA2-201ENST00000458748 PIAS3Q9Y6X2 628 aa18.62■□□□□ 0.57
SCARNA2-201ENST00000458748 COL4A3Q01955 1670 aa18.62■□□□□ 0.57
SCARNA2-201ENST00000458748 PATJQ8NI35 1801 aa18.62■□□□□ 0.57
SCARNA2-201ENST00000458748 KIF26AQ9ULI4 1882 aaPredicted RBP18.62■□□□□ 0.57
SCARNA2-201ENST00000458748 SHISA7A6NL88 538 aa18.61■□□□□ 0.57
SCARNA2-201ENST00000458748 LRRN2O75325 713 aa18.61■□□□□ 0.57
SCARNA2-201ENST00000458748 PRAMEF12O95522 483 aa18.61■□□□□ 0.57
SCARNA2-201ENST00000458748 FGFR1OPO95684 399 aaKnown RBP18.61■□□□□ 0.57
SCARNA2-201ENST00000458748 TARSP26639 723 aaKnown RBP18.61■□□□□ 0.57
SCARNA2-201ENST00000458748 KPNA1P52294 538 aaPredicted RBP18.61■□□□□ 0.57
SCARNA2-201ENST00000458748 INCA1Q0VD86 236 aa18.61■□□□□ 0.57
SCARNA2-201ENST00000458748 MORC3Q14149 939 aa18.61■□□□□ 0.57
SCARNA2-201ENST00000458748 ISM2Q6H9L7 571 aa18.61■□□□□ 0.57
SCARNA2-201ENST00000458748 SPOPLQ6IQ16 392 aa18.61■□□□□ 0.57
SCARNA2-201ENST00000458748 ACOT1Q86TX2 421 aa18.61■□□□□ 0.57
SCARNA2-201ENST00000458748 NUP93Q8N1F7 819 aa18.61■□□□□ 0.57
SCARNA2-201ENST00000458748 PDZD8Q8NEN9 1154 aa18.61■□□□□ 0.57
SCARNA2-201ENST00000458748 FAM3CQ92520 227 aa18.61■□□□□ 0.57
SCARNA2-201ENST00000458748 EEF2KMTQ96G04 330 aa18.61■□□□□ 0.57
SCARNA2-201ENST00000458748 LRRC3BQ96PB8 259 aa18.61■□□□□ 0.57
SCARNA2-201ENST00000458748 TTLL2Q9BWV7 592 aa18.61■□□□□ 0.57
SCARNA2-201ENST00000458748 COMMD8Q9NX08 183 aa18.61■□□□□ 0.57
SCARNA2-201ENST00000458748 ANAPC1Q9H1A4 1944 aa18.61■□□□□ 0.57
SCARNA2-201ENST00000458748 F5P12259 2224 aa18.6■□□□□ 0.57
SCARNA2-201ENST00000458748 GNA14O95837 355 aa18.6■□□□□ 0.57
SCARNA2-201ENST00000458748 AMPD2Q01433 879 aa18.6■□□□□ 0.57
SCARNA2-201ENST00000458748 CCDC40Q4G0X9 1142 aa18.6■□□□□ 0.57
SCARNA2-201ENST00000458748 KLHL10Q6JEL2 608 aa18.6■□□□□ 0.57
SCARNA2-201ENST00000458748 FILIP1Q7Z7B0 1213 aa18.6■□□□□ 0.57
SCARNA2-201ENST00000458748 FAM35AQ86V20 835 aa18.6■□□□□ 0.57
SCARNA2-201ENST00000458748 ZNF687Q8N1G0 1237 aa18.6■□□□□ 0.57
SCARNA2-201ENST00000458748 STKLD1Q8NE28 680 aa18.6■□□□□ 0.57
SCARNA2-201ENST00000458748 NELFBQ8WX92 580 aa18.6■□□□□ 0.57
SCARNA2-201ENST00000458748 OVCA2Q8WZ82 227 aa18.6■□□□□ 0.57
SCARNA2-201ENST00000458748 EXOC4Q96A65 974 aa18.6■□□□□ 0.57
SCARNA2-201ENST00000458748 IER2Q9BTL4 223 aa18.6■□□□□ 0.57
SCARNA2-201ENST00000458748 SDCBP2Q9H190 292 aa18.6■□□□□ 0.57
SCARNA2-201ENST00000458748 SEMA4AQ9H3S1 761 aa18.6■□□□□ 0.57
SCARNA2-201ENST00000458748 NME7Q9Y5B8 376 aa18.6■□□□□ 0.57
SCARNA2-201ENST00000458748 CACNA1IQ9P0X4 2223 aa18.59■□□□□ 0.57
SCARNA2-201ENST00000458748 TRIM49BA6NDI0 452 aa18.59■□□□□ 0.57
SCARNA2-201ENST00000458748 AP1G2O75843 785 aa18.59■□□□□ 0.57
SCARNA2-201ENST00000458748 HDCP19113 662 aa18.59■□□□□ 0.57
SCARNA2-201ENST00000458748 YWHAQP27348 245 aa18.59■□□□□ 0.57
SCARNA2-201ENST00000458748 PMS1P54277 932 aaKnown RBP18.59■□□□□ 0.57
SCARNA2-201ENST00000458748 YWHAEP62258 255 aaKnown RBP18.59■□□□□ 0.57
SCARNA2-201ENST00000458748 PAK1Q13153 545 aa18.59■□□□□ 0.57
SCARNA2-201ENST00000458748 FZD5Q13467 585 aa18.59■□□□□ 0.57
SCARNA2-201ENST00000458748 RALGPS2Q86X27 583 aaPredicted RBP18.59■□□□□ 0.57
SCARNA2-201ENST00000458748 GPIHBP1Q8IV16 184 aa18.59■□□□□ 0.57
SCARNA2-201ENST00000458748 USP13Q92995 863 aaPredicted RBP18.59■□□□□ 0.57
SCARNA2-201ENST00000458748 SPATA6Q9NWH7 488 aaPredicted RBP18.59■□□□□ 0.57
SCARNA2-201ENST00000458748 FBXO4Q9UKT5 387 aa18.59■□□□□ 0.57
SCARNA2-201ENST00000458748 FANCMQ8IYD8 2048 aa18.58■□□□□ 0.56
SCARNA2-201ENST00000458748 BIN1O00499 593 aa18.58■□□□□ 0.56
SCARNA2-201ENST00000458748 CLDN5O00501 218 aa18.58■□□□□ 0.56
SCARNA2-201ENST00000458748 LAMTOR5O43504 91 aa18.58■□□□□ 0.56
SCARNA2-201ENST00000458748 TADA3O75528 432 aa18.58■□□□□ 0.56
SCARNA2-201ENST00000458748 FAM200BP0CF97 657 aa18.58■□□□□ 0.56
SCARNA2-201ENST00000458748 CD58P19256 250 aa18.58■□□□□ 0.56
SCARNA2-201ENST00000458748 PDGFRLQ15198 375 aa18.58■□□□□ 0.56
SCARNA2-201ENST00000458748 ITPRIPL2Q3MIP1 535 aa18.58■□□□□ 0.56
SCARNA2-201ENST00000458748 ZNF528Q3MIS6 628 aa18.58■□□□□ 0.56
SCARNA2-201ENST00000458748 ZC3H14Q6PJT7 736 aaKnown RBP18.58■□□□□ 0.56
SCARNA2-201ENST00000458748 MAMSTRQ6ZN01 415 aa18.58■□□□□ 0.56
SCARNA2-201ENST00000458748 SLC2A14Q8TDB8 520 aa18.58■□□□□ 0.56
SCARNA2-201ENST00000458748 FBXO32Q969P5 355 aa18.58■□□□□ 0.56
SCARNA2-201ENST00000458748 SMG9Q9H0W8 520 aaKnown RBP18.58■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms