RNA–Protein interactions for RNA: ENST00000458530.1

VPS50-207, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 667 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-207ENST00000458530 GSCP56915 257 aaPredicted RBP9.45□□□□□ -0.9
VPS50-207ENST00000458530 WDR5P61964 334 aaKnown RBP9.45□□□□□ -0.9
VPS50-207ENST00000458530 ITIH3Q06033 890 aa9.45□□□□□ -0.9
VPS50-207ENST00000458530 CFAP221Q4G0U5 840 aa9.45□□□□□ -0.9
VPS50-207ENST00000458530 PLEKHG4Q58EX7 1191 aa9.45□□□□□ -0.9
VPS50-207ENST00000458530 DNAJC24Q6P3W2 148 aa9.45□□□□□ -0.9
VPS50-207ENST00000458530 LCLAT1Q6UWP7 414 aa9.45□□□□□ -0.9
VPS50-207ENST00000458530 DSTYKQ6XUX3 929 aa9.45□□□□□ -0.9
VPS50-207ENST00000458530 ZNF598Q86UK7 904 aaKnown RBP9.45□□□□□ -0.9
VPS50-207ENST00000458530 C1orf131Q8NDD1 294 aaKnown RBP9.45□□□□□ -0.9
VPS50-207ENST00000458530 UBXN4Q92575 508 aa9.45□□□□□ -0.9
VPS50-207ENST00000458530 LPPQ93052 612 aa9.45□□□□□ -0.9
VPS50-207ENST00000458530 ARHGEF26Q96DR7 871 aa9.45□□□□□ -0.9
VPS50-207ENST00000458530 FAM193BQ96PV7 902 aaPredicted RBP9.45□□□□□ -0.9
VPS50-207ENST00000458530 CARD6Q9BX69 1037 aa9.45□□□□□ -0.9
VPS50-207ENST00000458530 MRPL9Q9BYD2 267 aaKnown RBP9.45□□□□□ -0.9
VPS50-207ENST00000458530 ELOVL4Q9GZR5 314 aa9.45□□□□□ -0.9
VPS50-207ENST00000458530 OSGEPQ9NPF4 335 aa9.45□□□□□ -0.9
VPS50-207ENST00000458530 ANAPC7Q9UJX3 599 aa9.45□□□□□ -0.9
VPS50-207ENST00000458530 LRFN2Q9ULH4 789 aa9.45□□□□□ -0.9
VPS50-207ENST00000458530 SBDSQ9Y3A5 250 aaKnown RBP eCLIP9.45□□□□□ -0.9
VPS50-207ENST00000458530 SPTBN4Q9H254 2564 aa9.45□□□□□ -0.9
VPS50-207ENST00000458530 TECTAO75443 2155 aa9.44□□□□□ -0.9
VPS50-207ENST00000458530 CCDC66A2RUB6 948 aa9.44□□□□□ -0.9
VPS50-207ENST00000458530 LINC01553A4QN01 128 aa9.44□□□□□ -0.9
VPS50-207ENST00000458530 MYO1FO00160 1098 aa9.44□□□□□ -0.9
VPS50-207ENST00000458530 O00370 1275 aa9.44□□□□□ -0.9
VPS50-207ENST00000458530 CYB561D2O14569 222 aa9.44□□□□□ -0.9
VPS50-207ENST00000458530 PPEF2O14830 753 aa9.44□□□□□ -0.9
VPS50-207ENST00000458530 DCXO43602 365 aa9.44□□□□□ -0.9
VPS50-207ENST00000458530 TADA3O75528 432 aa9.44□□□□□ -0.9
VPS50-207ENST00000458530 MICAL2O94851 1124 aa9.44□□□□□ -0.9
VPS50-207ENST00000458530 GJB5O95377 273 aa9.44□□□□□ -0.9
VPS50-207ENST00000458530 TUBBP07437 444 aa9.44□□□□□ -0.9
VPS50-207ENST00000458530 PCSK1P29120 753 aa9.44□□□□□ -0.9
VPS50-207ENST00000458530 MAN1A1P33908 653 aa9.44□□□□□ -0.9
VPS50-207ENST00000458530 GNL1P36915 607 aaPredicted RBP9.44□□□□□ -0.9
VPS50-207ENST00000458530 BCAT1P54687 386 aa9.44□□□□□ -0.9
VPS50-207ENST00000458530 FAM189BP81408 668 aa9.44□□□□□ -0.9
VPS50-207ENST00000458530 RNASELQ05823 741 aaKnown RBP9.44□□□□□ -0.9
VPS50-207ENST00000458530 SOX4Q06945 474 aaPredicted RBP9.44□□□□□ -0.9
VPS50-207ENST00000458530 SOWAHAQ2M3V2 549 aa9.44□□□□□ -0.9
VPS50-207ENST00000458530 PUS10Q3MIT2 529 aaKnown RBP9.44□□□□□ -0.9
VPS50-207ENST00000458530 NOMO2Q5JPE7 1267 aa9.44□□□□□ -0.9
VPS50-207ENST00000458530 ARHGAP17Q68EM7 881 aa9.44□□□□□ -0.9
VPS50-207ENST00000458530 PLEKHA7Q6IQ23 1121 aa9.44□□□□□ -0.9
VPS50-207ENST00000458530 MMS22LQ6ZRQ5 1243 aa9.44□□□□□ -0.9
VPS50-207ENST00000458530 LIMS2Q7Z4I7 341 aa9.44□□□□□ -0.9
VPS50-207ENST00000458530 NT5DC3Q86UY8 548 aa9.44□□□□□ -0.9
VPS50-207ENST00000458530 TTC13Q8NBP0 860 aa9.44□□□□□ -0.9
VPS50-207ENST00000458530 C3orf20Q8ND61 904 aa9.44□□□□□ -0.9
VPS50-207ENST00000458530 WHAMMQ8TF30 809 aa9.44□□□□□ -0.9
VPS50-207ENST00000458530 TFAP2BQ92481 460 aa9.44□□□□□ -0.9
VPS50-207ENST00000458530 MRPL45Q9BRJ2 306 aaKnown RBP9.44□□□□□ -0.9
VPS50-207ENST00000458530 TLR10Q9BXR5 811 aa9.44□□□□□ -0.9
VPS50-207ENST00000458530 GOLGA2P5Q9HBQ8 144 aa9.44□□□□□ -0.9
VPS50-207ENST00000458530 CYLDQ9NQC7 956 aa9.44□□□□□ -0.9
VPS50-207ENST00000458530 IP6K2Q9UHH9 426 aa9.44□□□□□ -0.9
VPS50-207ENST00000458530 TSR3Q9UJK0 312 aaKnown RBP9.44□□□□□ -0.9
VPS50-207ENST00000458530 INPP5FQ9Y2H2 1132 aa9.44□□□□□ -0.9
VPS50-207ENST00000458530 PCDHB7Q9Y5E2 793 aa9.44□□□□□ -0.9
VPS50-207ENST00000458530 PTPRDP23468 1912 aa9.43□□□□□ -0.9
VPS50-207ENST00000458530 PATJQ8NI35 1801 aa9.43□□□□□ -0.9
VPS50-207ENST00000458530 CARNS1A5YM72 827 aa9.43□□□□□ -0.9
VPS50-207ENST00000458530 TMEM189-UBE2V1I3L0A0 370 aa9.43□□□□□ -0.9
VPS50-207ENST00000458530 KCNK3O14649 394 aa9.43□□□□□ -0.9
VPS50-207ENST00000458530 TRAPPC3O43617 180 aa9.43□□□□□ -0.9
VPS50-207ENST00000458530 RNF40O75150 1001 aa9.43□□□□□ -0.9
VPS50-207ENST00000458530 IBSPP21815 317 aaPredicted RBP9.43□□□□□ -0.9
VPS50-207ENST00000458530 KCNA5P22460 613 aa9.43□□□□□ -0.9
VPS50-207ENST00000458530 RRM1P23921 792 aa9.43□□□□□ -0.9
VPS50-207ENST00000458530 MCM3P25205 808 aa9.43□□□□□ -0.9
VPS50-207ENST00000458530 CETN2P41208 172 aa9.43□□□□□ -0.9
VPS50-207ENST00000458530 ACADSBP45954 432 aa9.43□□□□□ -0.9
VPS50-207ENST00000458530 AARSP49588 968 aaKnown RBP eCLIP9.43□□□□□ -0.9
VPS50-207ENST00000458530 DEFB103AP81534 67 aa9.43□□□□□ -0.9
VPS50-207ENST00000458530 ZP2Q05996 745 aa9.43□□□□□ -0.9
VPS50-207ENST00000458530 BST2Q10589 180 aaKnown RBP9.43□□□□□ -0.9
VPS50-207ENST00000458530 ZNF268Q14587 947 aaPredicted RBP9.43□□□□□ -0.9
VPS50-207ENST00000458530 MESDQ14696 234 aa9.43□□□□□ -0.9
VPS50-207ENST00000458530 MBTPS1Q14703 1052 aa9.43□□□□□ -0.9
VPS50-207ENST00000458530 MAPRE1Q15691 268 aaKnown RBP9.43□□□□□ -0.9
VPS50-207ENST00000458530 PPP2R5EQ16537 467 aa9.43□□□□□ -0.9
VPS50-207ENST00000458530 UPP1Q16831 310 aa9.43□□□□□ -0.9
VPS50-207ENST00000458530 TCTN1Q2MV58 587 aa9.43□□□□□ -0.9
VPS50-207ENST00000458530 GOLGA7BQ2TAP0 167 aa9.43□□□□□ -0.9
VPS50-207ENST00000458530 SEL1L2Q5TEA6 688 aa9.43□□□□□ -0.9
VPS50-207ENST00000458530 PTCRAQ6ISU1 281 aaPredicted RBP9.43□□□□□ -0.9
VPS50-207ENST00000458530 DENND1BQ6P3S1 775 aa9.43□□□□□ -0.9
VPS50-207ENST00000458530 DCUN1D2Q6PH85 259 aa9.43□□□□□ -0.9
VPS50-207ENST00000458530 DCLRE1AQ6PJP8 1040 aa9.43□□□□□ -0.9
VPS50-207ENST00000458530 HFE2Q6ZVN8 426 aa9.43□□□□□ -0.9
VPS50-207ENST00000458530 ZNF572Q7Z3I7 529 aaPredicted RBP9.43□□□□□ -0.9
VPS50-207ENST00000458530 ACOT1Q86TX2 421 aa9.43□□□□□ -0.9
VPS50-207ENST00000458530 ZDHHC17Q8IUH5 632 aa9.43□□□□□ -0.9
VPS50-207ENST00000458530 CRYBG2Q8N1P7 616 aa9.43□□□□□ -0.9
VPS50-207ENST00000458530 PDCL2Q8N4E4 241 aa9.43□□□□□ -0.9
VPS50-207ENST00000458530 B3GALNT2Q8NCR0 500 aa9.43□□□□□ -0.9
VPS50-207ENST00000458530 GSTCDQ8NEC7 633 aa9.43□□□□□ -0.9
VPS50-207ENST00000458530 FEZF2Q8TBJ5 459 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms