RNA–Protein interactions for RNA: ENST00000457942.1

CHCHD3-204, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 4

Gene CHCHD3, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-204ENST00000457942 TDP1Q9NUW8 608 aa16.83■□□□□ 0.28
CHCHD3-204ENST00000457942 CGNQ9P2M7 1197 aaKnown RBP16.83■□□□□ 0.28
CHCHD3-204ENST00000457942 SERTAD1Q9UHV2 236 aa16.83■□□□□ 0.28
CHCHD3-204ENST00000457942 ATRXP46100 2492 aa16.82■□□□□ 0.28
CHCHD3-204ENST00000457942 GREB1Q4ZG55 1949 aa16.82■□□□□ 0.28
CHCHD3-204ENST00000457942 TRAV19A0A0A6YYK7 116 aa16.82■□□□□ 0.28
CHCHD3-204ENST00000457942 PVALEFA0A1B0GWK0 134 aa16.82■□□□□ 0.28
CHCHD3-204ENST00000457942 CCDC192P0DO97 292 aa16.82■□□□□ 0.28
CHCHD3-204ENST00000457942 SPINK2P20155 84 aa16.82■□□□□ 0.28
CHCHD3-204ENST00000457942 WARSP23381 471 aaKnown RBP16.82■□□□□ 0.28
CHCHD3-204ENST00000457942 BDNFP23560 247 aa16.82■□□□□ 0.28
CHCHD3-204ENST00000457942 LMO2P25791 158 aa16.82■□□□□ 0.28
CHCHD3-204ENST00000457942 BIRC3Q13489 604 aa16.82■□□□□ 0.28
CHCHD3-204ENST00000457942 KNOP1Q1ED39 458 aaKnown RBP16.82■□□□□ 0.28
CHCHD3-204ENST00000457942 BMT2Q1RMZ1 405 aa16.82■□□□□ 0.28
CHCHD3-204ENST00000457942 MDH1BQ5I0G3 518 aa16.82■□□□□ 0.28
CHCHD3-204ENST00000457942 TRIM68Q6AZZ1 485 aa16.82■□□□□ 0.28
CHCHD3-204ENST00000457942 GOLGA5Q8TBA6 731 aa16.82■□□□□ 0.28
CHCHD3-204ENST00000457942 TRMT2BQ96GJ1 504 aaKnown RBP16.82■□□□□ 0.28
CHCHD3-204ENST00000457942 MRPL45Q9BRJ2 306 aaKnown RBP16.82■□□□□ 0.28
CHCHD3-204ENST00000457942 POLR3BQ9NW08 1133 aaPredicted RBP16.82■□□□□ 0.28
CHCHD3-204ENST00000457942 CNOT1A5YKK6 2376 aaKnown RBP16.82■□□□□ 0.28
CHCHD3-204ENST00000457942 PTPRDP23468 1912 aa16.82■□□□□ 0.28
CHCHD3-204ENST00000457942 FAM208BQ5VWN6 2430 aa16.81■□□□□ 0.28
CHCHD3-204ENST00000457942 ANAPC1Q9H1A4 1944 aa16.81■□□□□ 0.28
CHCHD3-204ENST00000457942 TADA3O75528 432 aa16.81■□□□□ 0.28
CHCHD3-204ENST00000457942 RPP40O75818 363 aaKnown RBP16.81■□□□□ 0.28
CHCHD3-204ENST00000457942 EPN2O95208 641 aa16.81■□□□□ 0.28
CHCHD3-204ENST00000457942 PAPSS2O95340 614 aaPredicted RBP16.81■□□□□ 0.28
CHCHD3-204ENST00000457942 USP17L7P0C7H9 530 aa16.81■□□□□ 0.28
CHCHD3-204ENST00000457942 GNL1P36915 607 aaPredicted RBP16.81■□□□□ 0.28
CHCHD3-204ENST00000457942 MAGEA11P43364 429 aa16.81■□□□□ 0.28
CHCHD3-204ENST00000457942 EHHADHQ08426 723 aa16.81■□□□□ 0.28
CHCHD3-204ENST00000457942 RUNX3Q13761 415 aa16.81■□□□□ 0.28
CHCHD3-204ENST00000457942 KCNB1Q14721 858 aa16.81■□□□□ 0.28
CHCHD3-204ENST00000457942 WDR72Q3MJ13 1102 aa16.81■□□□□ 0.28
CHCHD3-204ENST00000457942 FAM171BQ6P995 826 aa16.81■□□□□ 0.28
CHCHD3-204ENST00000457942 VSTM1Q6UX27 236 aa16.81■□□□□ 0.28
CHCHD3-204ENST00000457942 SPATA32Q96LK8 384 aa16.81■□□□□ 0.28
CHCHD3-204ENST00000457942 CRTAC1Q9NQ79 661 aa16.81■□□□□ 0.28
CHCHD3-204ENST00000457942 NXF1Q9UBU9 619 aaKnown RBP16.81■□□□□ 0.28
CHCHD3-204ENST00000457942 ZFYVE26Q68DK2 2539 aa16.8■□□□□ 0.28
CHCHD3-204ENST00000457942 IGF2RP11717 2491 aa16.8■□□□□ 0.28
CHCHD3-204ENST00000457942 HELZP42694 1942 aaKnown RBP16.8■□□□□ 0.28
CHCHD3-204ENST00000457942 SOBPA7XYQ1 873 aa16.8■□□□□ 0.28
CHCHD3-204ENST00000457942 TRIM66O15016 1216 aa16.8■□□□□ 0.28
CHCHD3-204ENST00000457942 FOXD2O60548 495 aaPredicted RBP16.8■□□□□ 0.28
CHCHD3-204ENST00000457942 KCNK5O95279 499 aa16.8■□□□□ 0.28
CHCHD3-204ENST00000457942 CST3P01034 146 aaPredicted RBP16.8■□□□□ 0.28
CHCHD3-204ENST00000457942 SLFN14P0C7P3 912 aa16.8■□□□□ 0.28
CHCHD3-204ENST00000457942 IFNAR2P48551 515 aa16.8■□□□□ 0.28
CHCHD3-204ENST00000457942 LIMK1P53667 647 aa16.8■□□□□ 0.28
CHCHD3-204ENST00000457942 SHC2P98077 582 aa16.8■□□□□ 0.28
CHCHD3-204ENST00000457942 AMPD2Q01433 879 aa16.8■□□□□ 0.28
CHCHD3-204ENST00000457942 FAM160A1Q05DH4 1040 aa16.8■□□□□ 0.28
CHCHD3-204ENST00000457942 IFRD2Q12894 506 aaPredicted RBP16.8■□□□□ 0.28
CHCHD3-204ENST00000457942 FOXC1Q12948 553 aa16.8■□□□□ 0.28
CHCHD3-204ENST00000457942 ZNF268Q14587 947 aaPredicted RBP16.8■□□□□ 0.28
CHCHD3-204ENST00000457942 MTF1Q14872 753 aa16.8■□□□□ 0.28
CHCHD3-204ENST00000457942 MYCBPAPQ8TBZ2 947 aa16.8■□□□□ 0.28
CHCHD3-204ENST00000457942 GAB3Q8WWW8 586 aa16.8■□□□□ 0.28
CHCHD3-204ENST00000457942 SYAP1Q96A49 352 aaPredicted RBP16.8■□□□□ 0.28
CHCHD3-204ENST00000457942 PAGE5Q96GU1 130 aa16.8■□□□□ 0.28
CHCHD3-204ENST00000457942 PCED1BQ96HM7 432 aa16.8■□□□□ 0.28
CHCHD3-204ENST00000457942 MYRFLQ96LU7 910 aa16.8■□□□□ 0.28
CHCHD3-204ENST00000457942 HPS4Q9NQG7 708 aa16.8■□□□□ 0.28
CHCHD3-204ENST00000457942 RCOR1Q9UKL0 485 aa16.8■□□□□ 0.28
CHCHD3-204ENST00000457942 ZMIZ1Q9ULJ6 1067 aa16.8■□□□□ 0.28
CHCHD3-204ENST00000457942 WDFY3Q8IZQ1 3526 aa16.79■□□□□ 0.28
CHCHD3-204ENST00000457942 A0A1B0GVL5 298 aa16.79■□□□□ 0.28
CHCHD3-204ENST00000457942 A8MXQ7 604 aa16.79■□□□□ 0.28
CHCHD3-204ENST00000457942 GIPC1O14908 333 aa16.79■□□□□ 0.28
CHCHD3-204ENST00000457942 ACTN4O43707 911 aaKnown RBP16.79■□□□□ 0.28
CHCHD3-204ENST00000457942 TACC1O75410 805 aa16.79■□□□□ 0.28
CHCHD3-204ENST00000457942 PROS1P07225 676 aa16.79■□□□□ 0.28
CHCHD3-204ENST00000457942 ZNF806P0C7X5 589 aa16.79■□□□□ 0.28
CHCHD3-204ENST00000457942 ARSAP15289 507 aa16.79■□□□□ 0.28
CHCHD3-204ENST00000457942 PFKFB1P16118 471 aa16.79■□□□□ 0.28
CHCHD3-204ENST00000457942 MPLP40238 635 aa16.79■□□□□ 0.28
CHCHD3-204ENST00000457942 CASP4P49662 377 aa16.79■□□□□ 0.28
CHCHD3-204ENST00000457942 MYL6P60660 151 aa16.79■□□□□ 0.28
CHCHD3-204ENST00000457942 KRT85P78386 507 aa16.79■□□□□ 0.28
CHCHD3-204ENST00000457942 GRSF1Q12849 480 aaKnown RBP eCLIP16.79■□□□□ 0.28
CHCHD3-204ENST00000457942 CCINQ13939 588 aa16.79■□□□□ 0.28
CHCHD3-204ENST00000457942 PDGFRLQ15198 375 aa16.79■□□□□ 0.28
CHCHD3-204ENST00000457942 ZNF699Q32M78 642 aa16.79■□□□□ 0.28
CHCHD3-204ENST00000457942 RNF43Q68DV7 783 aa16.79■□□□□ 0.28
CHCHD3-204ENST00000457942 UNQ6494/PRO21346Q6UXR6 183 aa16.79■□□□□ 0.28
CHCHD3-204ENST00000457942 DENND5BQ6ZUT9 1274 aa16.79■□□□□ 0.28
CHCHD3-204ENST00000457942 LIMS2Q7Z4I7 341 aa16.79■□□□□ 0.28
CHCHD3-204ENST00000457942 C12orf56Q8IXR9 622 aa16.79■□□□□ 0.28
CHCHD3-204ENST00000457942 CPA6Q8N4T0 437 aa16.79■□□□□ 0.28
CHCHD3-204ENST00000457942 ARL14EPQ8N8R7 260 aaPredicted RBP16.79■□□□□ 0.28
CHCHD3-204ENST00000457942 CYP2S1Q96SQ9 504 aa16.79■□□□□ 0.28
CHCHD3-204ENST00000457942 FAM83CQ9BQN1 747 aa16.79■□□□□ 0.28
CHCHD3-204ENST00000457942 DUS2Q9NX74 493 aaKnown RBP16.79■□□□□ 0.28
CHCHD3-204ENST00000457942 EHD2Q9NZN4 543 aa16.79■□□□□ 0.28
CHCHD3-204ENST00000457942 TRPM5Q9NZQ8 1165 aa16.79■□□□□ 0.28
CHCHD3-204ENST00000457942 AKAP13Q12802 2813 aa16.78■□□□□ 0.28
CHCHD3-204ENST00000457942 ATG2BQ96BY7 2078 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms