RNA–Protein interactions for RNA: ENST00000457039.6

SMPD4-215, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 5

Gene SMPD4, Length 940 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-215ENST00000457039 ANKRD52Q8NB46 1076 aa14.97□□□□□ -0.01
SMPD4-215ENST00000457039 ITFG1Q8TB96 612 aa14.97□□□□□ -0.01
SMPD4-215ENST00000457039 TCEAL4Q96EI5 215 aa14.97□□□□□ -0.01
SMPD4-215ENST00000457039 TRMT2BQ96GJ1 504 aaKnown RBP14.97□□□□□ -0.01
SMPD4-215ENST00000457039 TTLL2Q9BWV7 592 aa14.97□□□□□ -0.01
SMPD4-215ENST00000457039 DUSP16Q9BY84 665 aa14.97□□□□□ -0.01
SMPD4-215ENST00000457039 ACP6Q9NPH0 428 aa14.97□□□□□ -0.01
SMPD4-215ENST00000457039 TSPAN16Q9UKR8 245 aa14.97□□□□□ -0.01
SMPD4-215ENST00000457039 USTQ9Y2C2 406 aa14.97□□□□□ -0.01
SMPD4-215ENST00000457039 GREB1Q4ZG55 1949 aa14.96□□□□□ -0.01
SMPD4-215ENST00000457039 C19orf67A6NJJ6 358 aa14.96□□□□□ -0.01
SMPD4-215ENST00000457039 LOC730098B7Z3J9 87 aa14.96□□□□□ -0.01
SMPD4-215ENST00000457039 HHLA1C9JL84 531 aa14.96□□□□□ -0.01
SMPD4-215ENST00000457039 F8VZ95 297 aa14.96□□□□□ -0.01
SMPD4-215ENST00000457039 CYP26A1O43174 497 aa14.96□□□□□ -0.01
SMPD4-215ENST00000457039 PNMA6AP0CW24 399 aaPredicted RBP14.96□□□□□ -0.01
SMPD4-215ENST00000457039 BRD2P25440 801 aaKnown RBP14.96□□□□□ -0.01
SMPD4-215ENST00000457039 CLCN1P35523 988 aa14.96□□□□□ -0.01
SMPD4-215ENST00000457039 UBASH3AP57075 661 aa14.96□□□□□ -0.01
SMPD4-215ENST00000457039 MAP3K7CLP57077 242 aa14.96□□□□□ -0.01
SMPD4-215ENST00000457039 POLR2FP61218 127 aaKnown RBP14.96□□□□□ -0.01
SMPD4-215ENST00000457039 USP46P62068 366 aa14.96□□□□□ -0.01
SMPD4-215ENST00000457039 STILQ15468 1287 aa14.96□□□□□ -0.01
SMPD4-215ENST00000457039 CNGA2Q16280 664 aa14.96□□□□□ -0.01
SMPD4-215ENST00000457039 GOLGA7BQ2TAP0 167 aa14.96□□□□□ -0.01
SMPD4-215ENST00000457039 PKDCCQ504Y2 493 aa14.96□□□□□ -0.01
SMPD4-215ENST00000457039 CYP4A22Q5TCH4 519 aa14.96□□□□□ -0.01
SMPD4-215ENST00000457039 GAREM2Q75VX8 874 aa14.96□□□□□ -0.01
SMPD4-215ENST00000457039 PDZD4Q76G19 769 aaPredicted RBP14.96□□□□□ -0.01
SMPD4-215ENST00000457039 TMEM150AQ86TG1 271 aa14.96□□□□□ -0.01
SMPD4-215ENST00000457039 NEK11Q8NG66 645 aa14.96□□□□□ -0.01
SMPD4-215ENST00000457039 SHKBP1Q8TBC3 707 aa14.96□□□□□ -0.01
SMPD4-215ENST00000457039 MYADMQ96S97 322 aa14.96□□□□□ -0.01
SMPD4-215ENST00000457039 RBSNQ9H1K0 784 aa14.96□□□□□ -0.01
SMPD4-215ENST00000457039 PNPLA8Q9NP80 782 aa14.96□□□□□ -0.01
SMPD4-215ENST00000457039 IL37Q9NZH6 218 aa14.96□□□□□ -0.01
SMPD4-215ENST00000457039 WDR3Q9UNX4 943 aaKnown RBP eCLIP14.96□□□□□ -0.01
SMPD4-215ENST00000457039 A0A0C4DFX4 3053 aa14.96□□□□□ -0.02
SMPD4-215ENST00000457039 PATJQ8NI35 1801 aa14.95□□□□□ -0.02
SMPD4-215ENST00000457039 FAM92AA1XBS5 289 aa14.95□□□□□ -0.02
SMPD4-215ENST00000457039 ZNF197O14709 1029 aa14.95□□□□□ -0.02
SMPD4-215ENST00000457039 TADA3O75528 432 aa14.95□□□□□ -0.02
SMPD4-215ENST00000457039 F11P03951 625 aa14.95□□□□□ -0.02
SMPD4-215ENST00000457039 MYL4P12829 197 aa14.95□□□□□ -0.02
SMPD4-215ENST00000457039 CEBPBP17676 345 aa14.95□□□□□ -0.02
SMPD4-215ENST00000457039 GABRR2P28476 465 aa14.95□□□□□ -0.02
SMPD4-215ENST00000457039 GET4Q7L5D6 327 aaPredicted RBP14.95□□□□□ -0.02
SMPD4-215ENST00000457039 NPAS3Q8IXF0 933 aa14.95□□□□□ -0.02
SMPD4-215ENST00000457039 NUP93Q8N1F7 819 aa14.95□□□□□ -0.02
SMPD4-215ENST00000457039 ZNF606Q8WXB4 792 aa14.95□□□□□ -0.02
SMPD4-215ENST00000457039 FGF13Q92913 245 aa14.95□□□□□ -0.02
SMPD4-215ENST00000457039 PCMTD1Q96MG8 357 aaPredicted RBP14.95□□□□□ -0.02
SMPD4-215ENST00000457039 UBXN6Q9BZV1 441 aa14.95□□□□□ -0.02
SMPD4-215ENST00000457039 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP14.95□□□□□ -0.02
SMPD4-215ENST00000457039 IFNKQ9P0W0 207 aa14.95□□□□□ -0.02
SMPD4-215ENST00000457039 MRPS23Q9Y3D9 190 aaKnown RBP14.95□□□□□ -0.02
SMPD4-215ENST00000457039 A0A1W2PRU2 124 aa14.94□□□□□ -0.02
SMPD4-215ENST00000457039 C2CD4DB7Z1M9 353 aa14.94□□□□□ -0.02
SMPD4-215ENST00000457039 FGF19O95750 216 aa14.94□□□□□ -0.02
SMPD4-215ENST00000457039 GJA1P17302 382 aa14.94□□□□□ -0.02
SMPD4-215ENST00000457039 GNA15P30679 374 aa14.94□□□□□ -0.02
SMPD4-215ENST00000457039 USP8P40818 1118 aa14.94□□□□□ -0.02
SMPD4-215ENST00000457039 SLC5A3P53794 718 aa14.94□□□□□ -0.02
SMPD4-215ENST00000457039 BCAT1P54687 386 aa14.94□□□□□ -0.02
SMPD4-215ENST00000457039 PDE4CQ08493 712 aa14.94□□□□□ -0.02
SMPD4-215ENST00000457039 TAF12Q16514 161 aa14.94□□□□□ -0.02
SMPD4-215ENST00000457039 MEA1Q16626 185 aa14.94□□□□□ -0.02
SMPD4-215ENST00000457039 OTOP3Q7RTS5 596 aa14.94□□□□□ -0.02
SMPD4-215ENST00000457039 GPRIN1Q7Z2K8 1008 aa14.94□□□□□ -0.02
SMPD4-215ENST00000457039 SLC47A2Q86VL8 602 aa14.94□□□□□ -0.02
SMPD4-215ENST00000457039 SCAMP5Q8TAC9 235 aa14.94□□□□□ -0.02
SMPD4-215ENST00000457039 RPGRIP1Q96KN7 1286 aa14.94□□□□□ -0.02
SMPD4-215ENST00000457039 XPO4Q9C0E2 1151 aaKnown RBP14.94□□□□□ -0.02
SMPD4-215ENST00000457039 TTYH3Q9C0H2 523 aa14.94□□□□□ -0.02
SMPD4-215ENST00000457039 NLRC4Q9NPP4 1024 aa14.94□□□□□ -0.02
SMPD4-215ENST00000457039 COMMD8Q9NX08 183 aa14.94□□□□□ -0.02
SMPD4-215ENST00000457039 EHD2Q9NZN4 543 aa14.94□□□□□ -0.02
SMPD4-215ENST00000457039 EPS15L1Q9UBC2 864 aa14.94□□□□□ -0.02
SMPD4-215ENST00000457039 UXTQ9UBK9 157 aaPredicted RBP14.94□□□□□ -0.02
SMPD4-215ENST00000457039 CDH7Q9ULB5 785 aa14.94□□□□□ -0.02
SMPD4-215ENST00000457039 MAGED2Q9UNF1 606 aaPredicted RBP14.94□□□□□ -0.02
SMPD4-215ENST00000457039 NR2E1Q9Y466 385 aa14.94□□□□□ -0.02
SMPD4-215ENST00000457039 ZFP37Q9Y6Q3 630 aaPredicted RBP14.94□□□□□ -0.02
SMPD4-215ENST00000457039 TCF20Q9UGU0 1960 aaKnown RBP14.94□□□□□ -0.02
SMPD4-215ENST00000457039 DOCK8Q8NF50 2099 aa14.94□□□□□ -0.02
SMPD4-215ENST00000457039 TULP2O00295 520 aa14.93□□□□□ -0.02
SMPD4-215ENST00000457039 XPO1O14980 1071 aaKnown RBP14.93□□□□□ -0.02
SMPD4-215ENST00000457039 RTN3O95197 1032 aaPredicted RBP14.93□□□□□ -0.02
SMPD4-215ENST00000457039 CFHP08603 1231 aa14.93□□□□□ -0.02
SMPD4-215ENST00000457039 SETSIPP0DME0 302 aa14.93□□□□□ -0.02
SMPD4-215ENST00000457039 SP100P23497 879 aaPredicted RBP14.93□□□□□ -0.02
SMPD4-215ENST00000457039 CDC25CP30307 473 aa14.93□□□□□ -0.02
SMPD4-215ENST00000457039 PLA2G4AP47712 749 aa14.93□□□□□ -0.02
SMPD4-215ENST00000457039 KIF11P52732 1056 aa14.93□□□□□ -0.02
SMPD4-215ENST00000457039 PTK2Q05397 1052 aa14.93□□□□□ -0.02
SMPD4-215ENST00000457039 BST2Q10589 180 aaKnown RBP14.93□□□□□ -0.02
SMPD4-215ENST00000457039 TEAD2Q15562 447 aa14.93□□□□□ -0.02
SMPD4-215ENST00000457039 FIGNQ5HY92 759 aa14.93□□□□□ -0.02
SMPD4-215ENST00000457039 RAB41Q5JT25 222 aa14.93□□□□□ -0.02
SMPD4-215ENST00000457039 PIGZQ86VD9 579 aa14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms