RNA–Protein interactions for RNA: ENST00000454968.5

LINC00963-208, long intergenic non-protein coding RNA 963, humanhuman

TSL 1 (best) BASIC

Gene LINC00963, Length 1,403 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-208ENST00000454968 NOX5Q96PH1 765 aa17.59■□□□□ 0.41
LINC00963-208ENST00000454968 C11orf84Q9BUA3 381 aaPredicted RBP17.59■□□□□ 0.41
LINC00963-208ENST00000454968 MRPL17Q9NRX2 175 aaKnown RBP17.59■□□□□ 0.41
LINC00963-208ENST00000454968 KRT82Q9NSB4 513 aa17.59■□□□□ 0.41
LINC00963-208ENST00000454968 TRMT1Q9NXH9 659 aaKnown RBP17.59■□□□□ 0.41
LINC00963-208ENST00000454968 ADAM22Q9P0K1 906 aa17.59■□□□□ 0.41
LINC00963-208ENST00000454968 STRIP2Q9ULQ0 834 aa17.59■□□□□ 0.41
LINC00963-208ENST00000454968 MAFFQ9ULX9 164 aa17.59■□□□□ 0.41
LINC00963-208ENST00000454968 CDY1Q9Y6F8 540 aa17.59■□□□□ 0.41
LINC00963-208ENST00000454968 DUSP10Q9Y6W6 482 aa17.59■□□□□ 0.41
LINC00963-208ENST00000454968 PLXNA3P51805 1871 aa17.59■□□□□ 0.41
LINC00963-208ENST00000454968 KRT86O43790 486 aa17.58■□□□□ 0.41
LINC00963-208ENST00000454968 C1RP00736 705 aa17.58■□□□□ 0.41
LINC00963-208ENST00000454968 DNAJB1P25685 340 aa17.58■□□□□ 0.41
LINC00963-208ENST00000454968 SCNN1AP37088 669 aa17.58■□□□□ 0.41
LINC00963-208ENST00000454968 PBX2P40425 430 aa17.58■□□□□ 0.41
LINC00963-208ENST00000454968 ZNF268Q14587 947 aaPredicted RBP17.58■□□□□ 0.41
LINC00963-208ENST00000454968 PPP1R15BQ5SWA1 713 aa17.58■□□□□ 0.41
LINC00963-208ENST00000454968 MMS22LQ6ZRQ5 1243 aa17.58■□□□□ 0.41
LINC00963-208ENST00000454968 PIGZQ86VD9 579 aa17.58■□□□□ 0.41
LINC00963-208ENST00000454968 SCML4Q8N228 414 aa17.58■□□□□ 0.41
LINC00963-208ENST00000454968 C18orf8Q96DM3 657 aa17.58■□□□□ 0.41
LINC00963-208ENST00000454968 MCRS1Q96EZ8 462 aa17.58■□□□□ 0.41
LINC00963-208ENST00000454968 CALR3Q96L12 384 aaKnown RBP17.58■□□□□ 0.41
LINC00963-208ENST00000454968 CEP295NLQ96MC4 621 aa17.58■□□□□ 0.41
LINC00963-208ENST00000454968 C11orf70Q9BRQ4 267 aa17.58■□□□□ 0.41
LINC00963-208ENST00000454968 WDR35Q9P2L0 1181 aa17.58■□□□□ 0.41
LINC00963-208ENST00000454968 TRIM10Q9UDY6 481 aa17.58■□□□□ 0.41
LINC00963-208ENST00000454968 PCDHB5Q9Y5E4 795 aa17.58■□□□□ 0.41
LINC00963-208ENST00000454968 H3BNC9 293 aa17.57■□□□□ 0.4
LINC00963-208ENST00000454968 AP1G2O75843 785 aa17.57■□□□□ 0.4
LINC00963-208ENST00000454968 ERBB2P04626 1255 aa17.57■□□□□ 0.4
LINC00963-208ENST00000454968 BDNFP23560 247 aa17.57■□□□□ 0.4
LINC00963-208ENST00000454968 RRM1P23921 792 aa17.57■□□□□ 0.4
LINC00963-208ENST00000454968 ACADSBP45954 432 aa17.57■□□□□ 0.4
LINC00963-208ENST00000454968 SLC8A3P57103 927 aa17.57■□□□□ 0.4
LINC00963-208ENST00000454968 RNF19BQ6ZMZ0 732 aa17.57■□□□□ 0.4
LINC00963-208ENST00000454968 XYLT1Q86Y38 959 aa17.57■□□□□ 0.4
LINC00963-208ENST00000454968 ZDHHC17Q8IUH5 632 aa17.57■□□□□ 0.4
LINC00963-208ENST00000454968 SPATA2LQ8IUW3 424 aaPredicted RBP17.57■□□□□ 0.4
LINC00963-208ENST00000454968 RHOT2Q8IXI1 618 aa17.57■□□□□ 0.4
LINC00963-208ENST00000454968 MSANTD4Q8NCY6 345 aa17.57■□□□□ 0.4
LINC00963-208ENST00000454968 C3orf20Q8ND61 904 aa17.57■□□□□ 0.4
LINC00963-208ENST00000454968 ZNF461Q8TAF7 563 aa17.57■□□□□ 0.4
LINC00963-208ENST00000454968 C8orf48Q96LL4 319 aa17.57■□□□□ 0.4
LINC00963-208ENST00000454968 MIS12Q9H081 205 aa17.57■□□□□ 0.4
LINC00963-208ENST00000454968 CRISPLD1Q9H336 500 aa17.57■□□□□ 0.4
LINC00963-208ENST00000454968 DMAP1Q9NPF5 467 aaPredicted RBP17.57■□□□□ 0.4
LINC00963-208ENST00000454968 UVRAGQ9P2Y5 699 aa17.57■□□□□ 0.4
LINC00963-208ENST00000454968 TJP2Q9UDY2 1190 aa17.57■□□□□ 0.4
LINC00963-208ENST00000454968 AFF4Q9UHB7 1163 aaKnown RBP17.57■□□□□ 0.4
LINC00963-208ENST00000454968 MYO7AQ13402 2215 aa17.57■□□□□ 0.4
LINC00963-208ENST00000454968 E5RJQ4 531 aa17.56■□□□□ 0.4
LINC00963-208ENST00000454968 TNFRSF10BO14763 440 aa17.56■□□□□ 0.4
LINC00963-208ENST00000454968 ATF2P15336 505 aa17.56■□□□□ 0.4
LINC00963-208ENST00000454968 ABCB4P21439 1286 aa17.56■□□□□ 0.4
LINC00963-208ENST00000454968 MSNP26038 577 aaKnown RBP17.56■□□□□ 0.4
LINC00963-208ENST00000454968 OR1D2P34982 312 aa17.56■□□□□ 0.4
LINC00963-208ENST00000454968 NDUFV1P49821 464 aa17.56■□□□□ 0.4
LINC00963-208ENST00000454968 ERVFC1P60507 584 aa17.56■□□□□ 0.4
LINC00963-208ENST00000454968 SMAD3P84022 425 aaKnown RBP17.56■□□□□ 0.4
LINC00963-208ENST00000454968 ARHGAP29Q52LW3 1261 aa17.56■□□□□ 0.4
LINC00963-208ENST00000454968 ARCQ7LC44 396 aa17.56■□□□□ 0.4
LINC00963-208ENST00000454968 MRPL43Q8N983 215 aaKnown RBP17.56■□□□□ 0.4
LINC00963-208ENST00000454968 POF1BQ8WVV4 589 aa17.56■□□□□ 0.4
LINC00963-208ENST00000454968 ZNF653Q96CK0 615 aa17.56■□□□□ 0.4
LINC00963-208ENST00000454968 KCNK16Q96T55 309 aa17.56■□□□□ 0.4
LINC00963-208ENST00000454968 MED10Q9BTT4 135 aa17.56■□□□□ 0.4
LINC00963-208ENST00000454968 RHOBTB2Q9BYZ6 727 aa17.56■□□□□ 0.4
LINC00963-208ENST00000454968 ALG13Q9NP73 1137 aaKnown RBP17.56■□□□□ 0.4
LINC00963-208ENST00000454968 IL37Q9NZH6 218 aa17.56■□□□□ 0.4
LINC00963-208ENST00000454968 MYO1AQ9UBC5 1043 aa17.56■□□□□ 0.4
LINC00963-208ENST00000454968 CNOT8Q9UFF9 292 aaKnown RBP17.56■□□□□ 0.4
LINC00963-208ENST00000454968 COG5Q9UP83 839 aa17.56■□□□□ 0.4
LINC00963-208ENST00000454968 PCDHGC5Q9Y5F6 944 aa17.56■□□□□ 0.4
LINC00963-208ENST00000454968 USP3Q9Y6I4 520 aa17.56■□□□□ 0.4
LINC00963-208ENST00000454968 TEX28O15482 410 aa17.55■□□□□ 0.4
LINC00963-208ENST00000454968 PAPSS1O43252 624 aaPredicted RBP17.55■□□□□ 0.4
LINC00963-208ENST00000454968 CNPP09543 421 aaKnown RBP17.55■□□□□ 0.4
LINC00963-208ENST00000454968 HAPLN1P10915 354 aaPredicted RBP17.55■□□□□ 0.4
LINC00963-208ENST00000454968 CPB1P15086 417 aa17.55■□□□□ 0.4
LINC00963-208ENST00000454968 RPL17P18621 184 aaKnown RBP17.55■□□□□ 0.4
LINC00963-208ENST00000454968 CYP2F1P24903 491 aa17.55■□□□□ 0.4
LINC00963-208ENST00000454968 MAP3K7CLP57077 242 aa17.55■□□□□ 0.4
LINC00963-208ENST00000454968 SNX16P57768 344 aa17.55■□□□□ 0.4
LINC00963-208ENST00000454968 ADCY1Q08828 1119 aa17.55■□□□□ 0.4
LINC00963-208ENST00000454968 MAMLD1Q13495 774 aa17.55■□□□□ 0.4
LINC00963-208ENST00000454968 C2CD6Q53TS8 623 aa17.55■□□□□ 0.4
LINC00963-208ENST00000454968 LIN9Q5TKA1 542 aa17.55■□□□□ 0.4
LINC00963-208ENST00000454968 PDE12Q6L8Q7 609 aaKnown RBP17.55■□□□□ 0.4
LINC00963-208ENST00000454968 LILRA6Q6PI73 481 aa17.55■□□□□ 0.4
LINC00963-208ENST00000454968 OLFML1Q6UWY5 402 aa17.55■□□□□ 0.4
LINC00963-208ENST00000454968 ATAD1Q8NBU5 361 aa17.55■□□□□ 0.4
LINC00963-208ENST00000454968 SLC35G2Q8TBE7 412 aa17.55■□□□□ 0.4
LINC00963-208ENST00000454968 IPO4Q8TEX9 1081 aaKnown RBP17.55■□□□□ 0.4
LINC00963-208ENST00000454968 KHSRPQ92945 711 aaKnown RBP eCLIP17.55■□□□□ 0.42e-13■■■■■ 28.4
LINC00963-208ENST00000454968 NGRNQ9NPE2 291 aaKnown RBP17.55■□□□□ 0.4
LINC00963-208ENST00000454968 LZTFL1Q9NQ48 299 aa17.55■□□□□ 0.4
LINC00963-208ENST00000454968 TLR9Q9NR96 1032 aa17.55■□□□□ 0.4
LINC00963-208ENST00000454968 MSRAQ9UJ68 235 aa17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 74.9 ms