RNA–Protein interactions for RNA: ENST00000454252.1

CHEK2-220, Transcript of checkpoint kinase 2, humanhuman

TSL 3

Gene CHEK2, Length 722 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHEK2-220ENST00000454252 TSC2P49815 1807 aa7.54□□□□□ -1.2
CHEK2-220ENST00000454252 PTPRJQ12913 1337 aa7.53□□□□□ -1.2
CHEK2-220ENST00000454252 TRIP11Q15643 1979 aa7.53□□□□□ -1.2
CHEK2-220ENST00000454252 H0YCG3 227 aa7.53□□□□□ -1.2
CHEK2-220ENST00000454252 TRIM24O15164 1050 aa7.53□□□□□ -1.2
CHEK2-220ENST00000454252 TBCAO75347 108 aaKnown RBP7.53□□□□□ -1.2
CHEK2-220ENST00000454252 CFIP05156 583 aa7.53□□□□□ -1.2
CHEK2-220ENST00000454252 KRT19P08727 400 aa7.53□□□□□ -1.2
CHEK2-220ENST00000454252 USP17L7P0C7H9 530 aa7.53□□□□□ -1.2
CHEK2-220ENST00000454252 HDCP19113 662 aa7.53□□□□□ -1.2
CHEK2-220ENST00000454252 CSRP1P21291 193 aaKnown RBP7.53□□□□□ -1.2
CHEK2-220ENST00000454252 ITPKAP23677 461 aa7.53□□□□□ -1.2
CHEK2-220ENST00000454252 SIM1P81133 766 aaPredicted RBP7.53□□□□□ -1.2
CHEK2-220ENST00000454252 AMPD2Q01433 879 aa7.53□□□□□ -1.2
CHEK2-220ENST00000454252 CEBPZQ03701 1054 aaKnown RBP7.53□□□□□ -1.2
CHEK2-220ENST00000454252 KCNB1Q14721 858 aa7.53□□□□□ -1.2
CHEK2-220ENST00000454252 ACAP1Q15027 740 aa7.53□□□□□ -1.2
CHEK2-220ENST00000454252 SF3A1Q15459 793 aaKnown RBP7.53□□□□□ -1.2
CHEK2-220ENST00000454252 KYAT1Q16773 422 aa7.53□□□□□ -1.2
CHEK2-220ENST00000454252 SOWAHAQ2M3V2 549 aa7.53□□□□□ -1.2
CHEK2-220ENST00000454252 MAP7D1Q3KQU3 841 aa7.53□□□□□ -1.2
CHEK2-220ENST00000454252 SV2CQ496J9 727 aa7.53□□□□□ -1.2
CHEK2-220ENST00000454252 C19orf48Q6RUI8 117 aa7.53□□□□□ -1.2
CHEK2-220ENST00000454252 LRSAM1Q6UWE0 723 aa7.53□□□□□ -1.2
CHEK2-220ENST00000454252 DYMQ7RTS9 669 aa7.53□□□□□ -1.2
CHEK2-220ENST00000454252 SPATA2LQ8IUW3 424 aaPredicted RBP7.53□□□□□ -1.2
CHEK2-220ENST00000454252 ADGRF2Q8IZF7 708 aa7.53□□□□□ -1.2
CHEK2-220ENST00000454252 PIP4P2Q8N4L2 257 aa7.53□□□□□ -1.2
CHEK2-220ENST00000454252 CHCHD4Q8N4Q1 142 aa7.53□□□□□ -1.2
CHEK2-220ENST00000454252 CSGALNACT2Q8N6G5 542 aa7.53□□□□□ -1.2
CHEK2-220ENST00000454252 IL17RCQ8NAC3 791 aa7.53□□□□□ -1.2
CHEK2-220ENST00000454252 OLIG1Q8TAK6 271 aa7.53□□□□□ -1.2
CHEK2-220ENST00000454252 POMGNT1Q8WZA1 660 aa7.53□□□□□ -1.2
CHEK2-220ENST00000454252 KCNN1Q92952 543 aa7.53□□□□□ -1.2
CHEK2-220ENST00000454252 TRMT2BQ96GJ1 504 aaKnown RBP7.53□□□□□ -1.2
CHEK2-220ENST00000454252 MYRFLQ96LU7 910 aa7.53□□□□□ -1.2
CHEK2-220ENST00000454252 CAMK1GQ96NX5 476 aa7.53□□□□□ -1.2
CHEK2-220ENST00000454252 GTPBP2Q9BX10 602 aaKnown RBP7.53□□□□□ -1.2
CHEK2-220ENST00000454252 RNF38Q9H0F5 515 aa7.53□□□□□ -1.2
CHEK2-220ENST00000454252 PCIF1Q9H4Z3 704 aa7.53□□□□□ -1.2
CHEK2-220ENST00000454252 ASB7Q9H672 318 aa7.53□□□□□ -1.2
CHEK2-220ENST00000454252 CD93Q9NPY3 652 aa7.53□□□□□ -1.2
CHEK2-220ENST00000454252 CRTAC1Q9NQ79 661 aa7.53□□□□□ -1.2
CHEK2-220ENST00000454252 TMEM30AQ9NV96 361 aa7.53□□□□□ -1.2
CHEK2-220ENST00000454252 KCND2Q9NZV8 630 aa7.53□□□□□ -1.2
CHEK2-220ENST00000454252 HCN2Q9UL51 889 aa7.53□□□□□ -1.2
CHEK2-220ENST00000454252 MMP17Q9ULZ9 603 aa7.53□□□□□ -1.2
CHEK2-220ENST00000454252 ARHGAP26Q9UNA1 814 aa7.53□□□□□ -1.2
CHEK2-220ENST00000454252 NME7Q9Y5B8 376 aa7.53□□□□□ -1.2
CHEK2-220ENST00000454252 SNX9Q9Y5X1 595 aa7.53□□□□□ -1.2
CHEK2-220ENST00000454252 STYXL1Q9Y6J8 313 aa7.53□□□□□ -1.2
CHEK2-220ENST00000454252 FASNP49327 2511 aaKnown RBP7.52□□□□□ -1.21
CHEK2-220ENST00000454252 TCRBV21S2A2A0A5A6 115 aa7.52□□□□□ -1.21
CHEK2-220ENST00000454252 HUS1O60921 280 aa7.52□□□□□ -1.21
CHEK2-220ENST00000454252 PPP1R37O75864 691 aa7.52□□□□□ -1.21
CHEK2-220ENST00000454252 ZIC2O95409 532 aaPredicted RBP7.52□□□□□ -1.21
CHEK2-220ENST00000454252 ABL1P00519 1130 aa7.52□□□□□ -1.21
CHEK2-220ENST00000454252 PDGFRBP09619 1106 aa7.52□□□□□ -1.21
CHEK2-220ENST00000454252 BDNFP23560 247 aa7.52□□□□□ -1.21
CHEK2-220ENST00000454252 UBA7P41226 1012 aa7.52□□□□□ -1.21
CHEK2-220ENST00000454252 P2RY2P41231 377 aa7.52□□□□□ -1.21
CHEK2-220ENST00000454252 WASP42768 502 aa7.52□□□□□ -1.21
CHEK2-220ENST00000454252 NASPP49321 788 aaPredicted RBP7.52□□□□□ -1.21
CHEK2-220ENST00000454252 RPL10AP62906 217 aaKnown RBP7.52□□□□□ -1.21
CHEK2-220ENST00000454252 SMARCB1Q12824 385 aa7.52□□□□□ -1.21
CHEK2-220ENST00000454252 IFRD2Q12894 506 aaPredicted RBP7.52□□□□□ -1.21
CHEK2-220ENST00000454252 DHCR24Q15392 516 aa7.52□□□□□ -1.21
CHEK2-220ENST00000454252 NFE2Q16621 373 aaPredicted RBP7.52□□□□□ -1.21
CHEK2-220ENST00000454252 RILPL1Q5EBL4 403 aa7.52□□□□□ -1.21
CHEK2-220ENST00000454252 RHBDF2Q6PJF5 856 aa7.52□□□□□ -1.21
CHEK2-220ENST00000454252 ZNF720Q7Z2F6 126 aa7.52□□□□□ -1.21
CHEK2-220ENST00000454252 PIP4P1Q86T03 277 aa7.52□□□□□ -1.21
CHEK2-220ENST00000454252 MARCH9Q86YJ5 346 aa7.52□□□□□ -1.21
CHEK2-220ENST00000454252 MIB1Q86YT6 1006 aa7.52□□□□□ -1.21
CHEK2-220ENST00000454252 NAT16Q8N8M0 369 aa7.52□□□□□ -1.21
CHEK2-220ENST00000454252 LINC00301Q8NCQ3 95 aa7.52□□□□□ -1.21
CHEK2-220ENST00000454252 GLIS3Q8NEA6 775 aa7.52□□□□□ -1.21
CHEK2-220ENST00000454252 OR5B17Q8NGF7 314 aa7.52□□□□□ -1.21
CHEK2-220ENST00000454252 RASSF8Q8NHQ8 419 aa7.52□□□□□ -1.21
CHEK2-220ENST00000454252 LEO1Q8WVC0 666 aaPredicted RBP7.52□□□□□ -1.21
CHEK2-220ENST00000454252 KBTBD7Q8WVZ9 684 aa7.52□□□□□ -1.21
CHEK2-220ENST00000454252 WBP2Q969T9 261 aa7.52□□□□□ -1.21
CHEK2-220ENST00000454252 EPSTI1Q96J88 318 aa7.52□□□□□ -1.21
CHEK2-220ENST00000454252 ZNF560Q96MR9 790 aa7.52□□□□□ -1.21
CHEK2-220ENST00000454252 TSPAN18Q96SJ8 248 aa7.52□□□□□ -1.21
CHEK2-220ENST00000454252 ACBD6Q9BR61 282 aa7.52□□□□□ -1.21
CHEK2-220ENST00000454252 CBWD1Q9BRT8 395 aa7.52□□□□□ -1.21
CHEK2-220ENST00000454252 TRIM9Q9C026 710 aa7.52□□□□□ -1.21
CHEK2-220ENST00000454252 SLC6A17Q9H1V8 727 aa7.52□□□□□ -1.21
CHEK2-220ENST00000454252 TMEM206Q9H813 350 aa7.52□□□□□ -1.21
CHEK2-220ENST00000454252 PDE11AQ9HCR9 933 aa7.52□□□□□ -1.21
CHEK2-220ENST00000454252 ABCB6Q9NP58 842 aa7.52□□□□□ -1.21
CHEK2-220ENST00000454252 RBAKQ9NYW8 714 aaPredicted RBP7.52□□□□□ -1.21
CHEK2-220ENST00000454252 BCCIPQ9P287 314 aaKnown RBP eCLIP7.52□□□□□ -1.21
CHEK2-220ENST00000454252 CFAP97Q9P2B7 532 aa7.52□□□□□ -1.21
CHEK2-220ENST00000454252 UXTQ9UBK9 157 aaPredicted RBP7.52□□□□□ -1.21
CHEK2-220ENST00000454252 ZMYM5Q9UJ78 669 aa7.52□□□□□ -1.21
CHEK2-220ENST00000454252 RCOR1Q9UKL0 485 aa7.52□□□□□ -1.21
CHEK2-220ENST00000454252 CPQQ9Y646 472 aa7.52□□□□□ -1.21
CHEK2-220ENST00000454252 CACNA1EQ15878 2313 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms