RNA–Protein interactions for RNA: ENST00000452047.1

CPSF4-208, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 3

Gene CPSF4, Length 687 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-208ENST00000452047 RBM12Q9NTZ6 932 aaKnown RBP13.3□□□□□ -0.28
CPSF4-208ENST00000452047 ZSCAN32Q9NX65 697 aa13.3□□□□□ -0.28
CPSF4-208ENST00000452047 TRAV19A0A0A6YYK7 116 aa13.29□□□□□ -0.28
CPSF4-208ENST00000452047 IKBKBO14920 756 aa13.29□□□□□ -0.28
CPSF4-208ENST00000452047 MAPK13O15264 365 aa13.29□□□□□ -0.28
CPSF4-208ENST00000452047 CALUO43852 315 aaPredicted RBP13.29□□□□□ -0.28
CPSF4-208ENST00000452047 KIF20AO95235 890 aa13.29□□□□□ -0.28
CPSF4-208ENST00000452047 CKMP06732 381 aa13.29□□□□□ -0.28
CPSF4-208ENST00000452047 USP17L7P0C7H9 530 aa13.29□□□□□ -0.28
CPSF4-208ENST00000452047 RAP1GAPP47736 663 aa13.29□□□□□ -0.28
CPSF4-208ENST00000452047 CCR3P51677 355 aa13.29□□□□□ -0.28
CPSF4-208ENST00000452047 RUNX3Q13761 415 aa13.29□□□□□ -0.28
CPSF4-208ENST00000452047 LRRC32Q14392 662 aa13.29□□□□□ -0.28
CPSF4-208ENST00000452047 MTF1Q14872 753 aa13.29□□□□□ -0.28
CPSF4-208ENST00000452047 PON2Q15165 354 aa13.29□□□□□ -0.28
CPSF4-208ENST00000452047 ZCWPW2Q504Y3 356 aa13.29□□□□□ -0.28
CPSF4-208ENST00000452047 ZNF667Q5HYK9 610 aa13.29□□□□□ -0.28
CPSF4-208ENST00000452047 CEP135Q66GS9 1140 aa13.29□□□□□ -0.28
CPSF4-208ENST00000452047 SCARA5Q6ZMJ2 495 aa13.29□□□□□ -0.28
CPSF4-208ENST00000452047 Q6ZS52 159 aa13.29□□□□□ -0.28
CPSF4-208ENST00000452047 SV2AQ7L0J3 742 aa13.29□□□□□ -0.28
CPSF4-208ENST00000452047 GUF1Q8N442 669 aaKnown RBP13.29□□□□□ -0.28
CPSF4-208ENST00000452047 ARL14EPQ8N8R7 260 aaPredicted RBP13.29□□□□□ -0.28
CPSF4-208ENST00000452047 CCDC47Q96A33 483 aaKnown RBP13.29□□□□□ -0.28
CPSF4-208ENST00000452047 B3GNT5Q9BYG0 378 aa13.29□□□□□ -0.28
CPSF4-208ENST00000452047 FAM126AQ9BYI3 521 aaPredicted RBP13.29□□□□□ -0.28
CPSF4-208ENST00000452047 ZNF518BQ9C0D4 1074 aa13.29□□□□□ -0.28
CPSF4-208ENST00000452047 EBF3Q9H4W6 596 aa13.29□□□□□ -0.28
CPSF4-208ENST00000452047 TRPC7Q9HCX4 862 aa13.29□□□□□ -0.28
CPSF4-208ENST00000452047 MAPK8IP1Q9UQF2 711 aa13.29□□□□□ -0.28
CPSF4-208ENST00000452047 FRMD4BQ9Y2L6 1034 aa13.29□□□□□ -0.28
CPSF4-208ENST00000452047 KIAA1549LQ6ZVL6 1849 aa13.29□□□□□ -0.28
CPSF4-208ENST00000452047 MYO16Q9Y6X6 1858 aa13.29□□□□□ -0.28
CPSF4-208ENST00000452047 CLDN5O00501 218 aa13.28□□□□□ -0.28
CPSF4-208ENST00000452047 AKAP3O75969 853 aa13.28□□□□□ -0.28
CPSF4-208ENST00000452047 PAPSS2O95340 614 aaPredicted RBP13.28□□□□□ -0.28
CPSF4-208ENST00000452047 ASS1P00966 412 aaKnown RBP13.28□□□□□ -0.28
CPSF4-208ENST00000452047 ARSAP15289 507 aa13.28□□□□□ -0.28
CPSF4-208ENST00000452047 TCF3P15923 654 aa13.28□□□□□ -0.28
CPSF4-208ENST00000452047 PFKLP17858 780 aa13.28□□□□□ -0.28
CPSF4-208ENST00000452047 NR2F2P24468 414 aa13.28□□□□□ -0.28
CPSF4-208ENST00000452047 ANXA13P27216 316 aa13.28□□□□□ -0.28
CPSF4-208ENST00000452047 SATB1Q01826 763 aa13.28□□□□□ -0.28
CPSF4-208ENST00000452047 PDGFRLQ15198 375 aa13.28□□□□□ -0.28
CPSF4-208ENST00000452047 DGKKQ5KSL6 1271 aa13.28□□□□□ -0.28
CPSF4-208ENST00000452047 PAQR9Q6ZVX9 377 aa13.28□□□□□ -0.28
CPSF4-208ENST00000452047 SPEM1Q8N4L4 309 aa13.28□□□□□ -0.28
CPSF4-208ENST00000452047 ATRIPQ8WXE1 791 aa13.28□□□□□ -0.28
CPSF4-208ENST00000452047 EPC1Q9H2F5 836 aa13.28□□□□□ -0.28
CPSF4-208ENST00000452047 EHD2Q9NZN4 543 aa13.28□□□□□ -0.28
CPSF4-208ENST00000452047 ARHGAP26Q9UNA1 814 aa13.28□□□□□ -0.28
CPSF4-208ENST00000452047 ZNF840PA6NDX5 716 aa13.27□□□□□ -0.29
CPSF4-208ENST00000452047 OLFM2O95897 454 aa13.27□□□□□ -0.29
CPSF4-208ENST00000452047 HDCP19113 662 aa13.27□□□□□ -0.29
CPSF4-208ENST00000452047 ASPAP45381 313 aa13.27□□□□□ -0.29
CPSF4-208ENST00000452047 CXCL12P48061 93 aa13.27□□□□□ -0.29
CPSF4-208ENST00000452047 VAMP7P51809 220 aa13.27□□□□□ -0.29
CPSF4-208ENST00000452047 ZXDBP98169 803 aa13.27□□□□□ -0.29
CPSF4-208ENST00000452047 ENPEPQ07075 957 aa13.27□□□□□ -0.29
CPSF4-208ENST00000452047 SGSM1Q2NKQ1 1148 aa13.27□□□□□ -0.29
CPSF4-208ENST00000452047 TMEM196Q5HYL7 178 aa13.27□□□□□ -0.29
CPSF4-208ENST00000452047 CC2D1AQ6P1N0 951 aaPredicted RBP13.27□□□□□ -0.29
CPSF4-208ENST00000452047 FAM35AQ86V20 835 aa13.27□□□□□ -0.29
CPSF4-208ENST00000452047 FMR1NBQ8N0W7 255 aaPredicted RBP13.27□□□□□ -0.29
CPSF4-208ENST00000452047 SYNPOQ8N3V7 929 aa13.27□□□□□ -0.29
CPSF4-208ENST00000452047 SH3RF2Q8TEC5 729 aa13.27□□□□□ -0.29
CPSF4-208ENST00000452047 OSCP1Q8WVF1 389 aa13.27□□□□□ -0.29
CPSF4-208ENST00000452047 TAF4BQ92750 862 aa13.27□□□□□ -0.29
CPSF4-208ENST00000452047 TNIP3Q96KP6 325 aa13.27□□□□□ -0.29
CPSF4-208ENST00000452047 C2orf42Q9NWW7 574 aa13.27□□□□□ -0.29
CPSF4-208ENST00000452047 TRPM5Q9NZQ8 1165 aa13.27□□□□□ -0.29
CPSF4-208ENST00000452047 HMGXB4Q9UGU5 601 aa13.27□□□□□ -0.29
CPSF4-208ENST00000452047 MYH10P35580 1976 aa13.27□□□□□ -0.29
CPSF4-208ENST00000452047 K7ESF4 209 aa13.26□□□□□ -0.29
CPSF4-208ENST00000452047 TRDMT1O14717 391 aaKnown RBP13.26□□□□□ -0.29
CPSF4-208ENST00000452047 OAS1P00973 400 aaKnown RBP13.26□□□□□ -0.29
CPSF4-208ENST00000452047 HLA-DRAP01903 254 aa13.26□□□□□ -0.29
CPSF4-208ENST00000452047 TRIM49P0CI25 452 aa13.26□□□□□ -0.29
CPSF4-208ENST00000452047 TRIM49CP0CI26 452 aa13.26□□□□□ -0.29
CPSF4-208ENST00000452047 P4HA1P13674 534 aa13.26□□□□□ -0.29
CPSF4-208ENST00000452047 PIK3CAP42336 1068 aa13.26□□□□□ -0.29
CPSF4-208ENST00000452047 PPP3CCP48454 512 aa13.26□□□□□ -0.29
CPSF4-208ENST00000452047 PDE6CP51160 858 aa13.26□□□□□ -0.29
CPSF4-208ENST00000452047 NRLP54845 237 aa13.26□□□□□ -0.29
CPSF4-208ENST00000452047 MCCD1P59942 119 aaPredicted RBP13.26□□□□□ -0.29
CPSF4-208ENST00000452047 PPP3CAQ08209 521 aa13.26□□□□□ -0.29
CPSF4-208ENST00000452047 TAF10Q12962 218 aa13.26□□□□□ -0.29
CPSF4-208ENST00000452047 PNOCQ13519 176 aa13.26□□□□□ -0.29
CPSF4-208ENST00000452047 BECN1Q14457 450 aa13.26□□□□□ -0.29
CPSF4-208ENST00000452047 PPP2R5DQ14738 602 aa13.26□□□□□ -0.29
CPSF4-208ENST00000452047 EML3Q32P44 896 aa13.26□□□□□ -0.29
CPSF4-208ENST00000452047 SPOPLQ6IQ16 392 aa13.26□□□□□ -0.29
CPSF4-208ENST00000452047 FSTL4Q6MZW2 842 aa13.26□□□□□ -0.29
CPSF4-208ENST00000452047 INTS8Q75QN2 995 aaKnown RBP13.26□□□□□ -0.29
CPSF4-208ENST00000452047 FAM186BQ8IYM0 893 aa13.26□□□□□ -0.29
CPSF4-208ENST00000452047 SMYD4Q8IYR2 804 aaPredicted RBP13.26□□□□□ -0.29
CPSF4-208ENST00000452047 FUKQ8N0W3 1084 aa13.26□□□□□ -0.29
CPSF4-208ENST00000452047 RUBCNQ92622 972 aa13.26□□□□□ -0.29
CPSF4-208ENST00000452047 KCNK16Q96T55 309 aa13.26□□□□□ -0.29
CPSF4-208ENST00000452047 CEP250Q9BV73 2442 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms