RNA–Protein interactions for RNA: ENST00000450385.5

SGCE-208, Transcript of sarcoglycan epsilon, humanhuman

TSL 3

Gene SGCE, Length 815 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-208ENST00000450385 FMR1NBQ8N0W7 255 aaPredicted RBP17.07■□□□□ 0.32
SGCE-208ENST00000450385 CRYBG2Q8N1P7 616 aa17.07■□□□□ 0.32
SGCE-208ENST00000450385 SPEM1Q8N4L4 309 aa17.07■□□□□ 0.32
SGCE-208ENST00000450385 TTC39CQ8N584 583 aa17.07■□□□□ 0.32
SGCE-208ENST00000450385 ZBTB44Q8NCP5 570 aa17.07■□□□□ 0.32
SGCE-208ENST00000450385 PDZD8Q8NEN9 1154 aa17.07■□□□□ 0.32
SGCE-208ENST00000450385 CCDC26Q8TAB7 109 aa17.07■□□□□ 0.32
SGCE-208ENST00000450385 PLEKHO2Q8TD55 490 aa17.07■□□□□ 0.32
SGCE-208ENST00000450385 ATRIPQ8WXE1 791 aa17.07■□□□□ 0.32
SGCE-208ENST00000450385 FAM84AQ96KN4 292 aa17.07■□□□□ 0.32
SGCE-208ENST00000450385 IMPG2Q9BZV3 1241 aa17.07■□□□□ 0.32
SGCE-208ENST00000450385 NDRG2Q9UN36 371 aaKnown RBP17.07■□□□□ 0.32
SGCE-208ENST00000450385 MYH10P35580 1976 aa17.07■□□□□ 0.32
SGCE-208ENST00000450385 FRYLO94915 3013 aa17.06■□□□□ 0.32
SGCE-208ENST00000450385 ASS1P00966 412 aaKnown RBP17.06■□□□□ 0.32
SGCE-208ENST00000450385 HDCP19113 662 aa17.06■□□□□ 0.32
SGCE-208ENST00000450385 PPP1R2P41236 205 aa17.06■□□□□ 0.32
SGCE-208ENST00000450385 CASP4P49662 377 aa17.06■□□□□ 0.32
SGCE-208ENST00000450385 PSMC1P62191 440 aaKnown RBP17.06■□□□□ 0.32
SGCE-208ENST00000450385 NR1H3Q13133 447 aa17.06■□□□□ 0.32
SGCE-208ENST00000450385 RUNX3Q13761 415 aa17.06■□□□□ 0.32
SGCE-208ENST00000450385 MDH1BQ5I0G3 518 aa17.06■□□□□ 0.32
SGCE-208ENST00000450385 NUP93Q8N1F7 819 aa17.06■□□□□ 0.32
SGCE-208ENST00000450385 CCDC150Q8NCX0 1101 aa17.06■□□□□ 0.32
SGCE-208ENST00000450385 SPATA20Q8TB22 786 aa17.06■□□□□ 0.32
SGCE-208ENST00000450385 ATP2A3Q93084 1043 aa17.06■□□□□ 0.32
SGCE-208ENST00000450385 SLITRK1Q96PX8 696 aa17.06■□□□□ 0.32
SGCE-208ENST00000450385 GOLPH3LQ9H4A5 285 aa17.06■□□□□ 0.32
SGCE-208ENST00000450385 CYP3A43Q9HB55 503 aa17.06■□□□□ 0.32
SGCE-208ENST00000450385 GCNT4Q9P109 453 aa17.06■□□□□ 0.32
SGCE-208ENST00000450385 ARHGAP26Q9UNA1 814 aa17.06■□□□□ 0.32
SGCE-208ENST00000450385 HELZP42694 1942 aaKnown RBP17.06■□□□□ 0.32
SGCE-208ENST00000450385 TADA3O75528 432 aa17.05■□□□□ 0.32
SGCE-208ENST00000450385 VNN1O95497 513 aa17.05■□□□□ 0.32
SGCE-208ENST00000450385 HOXA6P31267 233 aa17.05■□□□□ 0.32
SGCE-208ENST00000450385 CSTF1Q05048 431 aaKnown RBP17.05■□□□□ 0.32
SGCE-208ENST00000450385 MTAPQ13126 283 aa17.05■□□□□ 0.32
SGCE-208ENST00000450385 ZCWPW2Q504Y3 356 aa17.05■□□□□ 0.32
SGCE-208ENST00000450385 FAM186BQ8IYM0 893 aa17.05■□□□□ 0.32
SGCE-208ENST00000450385 STKLD1Q8NE28 680 aa17.05■□□□□ 0.32
SGCE-208ENST00000450385 OSCP1Q8WVF1 389 aa17.05■□□□□ 0.32
SGCE-208ENST00000450385 GTSE1Q9NYZ3 720 aa17.05■□□□□ 0.32
SGCE-208ENST00000450385 ZNF292O60281 2723 aa17.05■□□□□ 0.32
SGCE-208ENST00000450385 F8VP50 259 aa17.04■□□□□ 0.32
SGCE-208ENST00000450385 TRDMT1O14717 391 aaKnown RBP17.04■□□□□ 0.32
SGCE-208ENST00000450385 CETN3O15182 167 aa17.04■□□□□ 0.32
SGCE-208ENST00000450385 HCRTO43612 131 aa17.04■□□□□ 0.32
SGCE-208ENST00000450385 LILRB5O75023 590 aa17.04■□□□□ 0.32
SGCE-208ENST00000450385 ATG13O75143 517 aa17.04■□□□□ 0.32
SGCE-208ENST00000450385 AKAP3O75969 853 aa17.04■□□□□ 0.32
SGCE-208ENST00000450385 CKMP06732 381 aa17.04■□□□□ 0.32
SGCE-208ENST00000450385 PRR29P0C7W0 189 aa17.04■□□□□ 0.32
SGCE-208ENST00000450385 CNR2P34972 360 aa17.04■□□□□ 0.32
SGCE-208ENST00000450385 CXCL12P48061 93 aa17.04■□□□□ 0.32
SGCE-208ENST00000450385 SLC7A9P82251 487 aa17.04■□□□□ 0.32
SGCE-208ENST00000450385 GRSF1Q12849 480 aaKnown RBP eCLIP17.04■□□□□ 0.32
SGCE-208ENST00000450385 CCINQ13939 588 aa17.04■□□□□ 0.32
SGCE-208ENST00000450385 FBXO43Q4G163 708 aa17.04■□□□□ 0.32
SGCE-208ENST00000450385 ZNF658Q5TYW1 1059 aaPredicted RBP17.04■□□□□ 0.32
SGCE-208ENST00000450385 SDHAF4Q5VUM1 108 aa17.04■□□□□ 0.32
SGCE-208ENST00000450385 SNX30Q5VWJ9 437 aa17.04■□□□□ 0.32
SGCE-208ENST00000450385 DDX42Q86XP3 938 aaKnown RBP eCLIP17.04■□□□□ 0.32
SGCE-208ENST00000450385 GPR161Q8N6U8 529 aaKnown RBP17.04■□□□□ 0.32
SGCE-208ENST00000450385 ENGASEQ8NFI3 743 aa17.04■□□□□ 0.32
SGCE-208ENST00000450385 SMARCD1Q96GM5 515 aa17.04■□□□□ 0.32
SGCE-208ENST00000450385 DUSP9Q99956 384 aaKnown RBP17.04■□□□□ 0.32
SGCE-208ENST00000450385 B3GNT5Q9BYG0 378 aa17.04■□□□□ 0.32
SGCE-208ENST00000450385 TMEM8AQ9HCN3 771 aa17.04■□□□□ 0.32
SGCE-208ENST00000450385 IL37Q9NZH6 218 aa17.04■□□□□ 0.32
SGCE-208ENST00000450385 ZNF840PA6NDX5 716 aa17.03■□□□□ 0.32
SGCE-208ENST00000450385 SLC9A3R1O14745 358 aaPredicted RBP17.03■□□□□ 0.32
SGCE-208ENST00000450385 DRD1P21728 446 aa17.03■□□□□ 0.32
SGCE-208ENST00000450385 YWHAQP27348 245 aa17.03■□□□□ 0.32
SGCE-208ENST00000450385 TUBP50607 506 aa17.03■□□□□ 0.32
SGCE-208ENST00000450385 DLG4P78352 724 aa17.03■□□□□ 0.32
SGCE-208ENST00000450385 INCA1Q0VD86 236 aa17.03■□□□□ 0.32
SGCE-208ENST00000450385 USP4Q13107 963 aa17.03■□□□□ 0.32
SGCE-208ENST00000450385 MTF1Q14872 753 aa17.03■□□□□ 0.32
SGCE-208ENST00000450385 ZNF77Q15935 545 aa17.03■□□□□ 0.32
SGCE-208ENST00000450385 KRT39Q6A163 491 aa17.03■□□□□ 0.32
SGCE-208ENST00000450385 ADSSL1Q8N142 457 aa17.03■□□□□ 0.32
SGCE-208ENST00000450385 CPA6Q8N4T0 437 aa17.03■□□□□ 0.32
SGCE-208ENST00000450385 SECISBP2LQ93073 1101 aaKnown RBP17.03■□□□□ 0.32
SGCE-208ENST00000450385 ZFYVE19Q96K21 471 aa17.03■□□□□ 0.32
SGCE-208ENST00000450385 TSG101Q99816 390 aa17.03■□□□□ 0.32
SGCE-208ENST00000450385 FBXO44Q9H4M3 255 aa17.03■□□□□ 0.32
SGCE-208ENST00000450385 CSNK1G1Q9HCP0 422 aa17.03■□□□□ 0.32
SGCE-208ENST00000450385 DMAP1Q9NPF5 467 aaPredicted RBP17.03■□□□□ 0.32
SGCE-208ENST00000450385 DUS2Q9NX74 493 aaKnown RBP17.03■□□□□ 0.32
SGCE-208ENST00000450385 CCL26Q9Y258 94 aa17.03■□□□□ 0.32
SGCE-208ENST00000450385 NME7Q9Y5B8 376 aa17.03■□□□□ 0.32
SGCE-208ENST00000450385 EP300Q09472 2414 aaPredicted RBP17.02■□□□□ 0.32
SGCE-208ENST00000450385 FAM92AA1XBS5 289 aa17.02■□□□□ 0.32
SGCE-208ENST00000450385 OLFM2O95897 454 aa17.02■□□□□ 0.32
SGCE-208ENST00000450385 HLA-DRAP01903 254 aa17.02■□□□□ 0.32
SGCE-208ENST00000450385 EPB41P11171 864 aaKnown RBP17.02■□□□□ 0.32
SGCE-208ENST00000450385 PIK3CAP42336 1068 aa17.02■□□□□ 0.32
SGCE-208ENST00000450385 CDR1P51861 262 aa17.02■□□□□ 0.32
SGCE-208ENST00000450385 CDH8P55286 799 aa17.02■□□□□ 0.32
SGCE-208ENST00000450385 FKBP3Q00688 224 aaKnown RBP17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms