RNA–Protein interactions for RNA: ENST00000448520.5

PDLIM2-213, Transcript of PDZ and LIM domain 2, humanhuman

TSL 3

Gene PDLIM2, Length 894 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-213ENST00000448520 WDR44Q5JSH3 913 aa14.69□□□□□ -0.06
PDLIM2-213ENST00000448520 CEP135Q66GS9 1140 aa14.69□□□□□ -0.06
PDLIM2-213ENST00000448520 CC2D1AQ6P1N0 951 aaPredicted RBP14.69□□□□□ -0.06
PDLIM2-213ENST00000448520 Q6ZS52 159 aa14.69□□□□□ -0.06
PDLIM2-213ENST00000448520 CEP68Q76N32 757 aa14.69□□□□□ -0.06
PDLIM2-213ENST00000448520 TMEM150AQ86TG1 271 aa14.69□□□□□ -0.06
PDLIM2-213ENST00000448520 CBWD2Q8IUF1 395 aa14.69□□□□□ -0.06
PDLIM2-213ENST00000448520 PDCL2Q8N4E4 241 aa14.69□□□□□ -0.06
PDLIM2-213ENST00000448520 CSGALNACT2Q8N6G5 542 aa14.69□□□□□ -0.06
PDLIM2-213ENST00000448520 RDH13Q8NBN7 331 aa14.69□□□□□ -0.06
PDLIM2-213ENST00000448520 FAM84AQ96KN4 292 aa14.69□□□□□ -0.06
PDLIM2-213ENST00000448520 SRRTQ9BXP5 876 aaKnown RBP14.69□□□□□ -0.06
PDLIM2-213ENST00000448520 RBSNQ9H1K0 784 aa14.69□□□□□ -0.06
PDLIM2-213ENST00000448520 SAMSN1Q9NSI8 373 aaKnown RBP14.69□□□□□ -0.06
PDLIM2-213ENST00000448520 SEMA4GQ9NTN9 838 aa14.69□□□□□ -0.06
PDLIM2-213ENST00000448520 DMAC2Q9NW81 257 aa14.69□□□□□ -0.06
PDLIM2-213ENST00000448520 GDAP2Q9NXN4 497 aa14.69□□□□□ -0.06
PDLIM2-213ENST00000448520 ITGA11Q9UKX5 1188 aa14.69□□□□□ -0.06
PDLIM2-213ENST00000448520 R3HCC1Q9Y3T6 440 aaKnown RBP14.69□□□□□ -0.06
PDLIM2-213ENST00000448520 NFE2L3Q9Y4A8 694 aa14.69□□□□□ -0.06
PDLIM2-213ENST00000448520 CNOT1A5YKK6 2376 aaKnown RBP14.69□□□□□ -0.06
PDLIM2-213ENST00000448520 KIF26AQ9ULI4 1882 aaPredicted RBP14.69□□□□□ -0.06
PDLIM2-213ENST00000448520 TSC2P49815 1807 aa14.69□□□□□ -0.06
PDLIM2-213ENST00000448520 TULP1O00294 542 aaPredicted RBP14.68□□□□□ -0.06
PDLIM2-213ENST00000448520 KIAA0391O15091 583 aaKnown RBP14.68□□□□□ -0.06
PDLIM2-213ENST00000448520 EXTL3O43909 919 aa14.68□□□□□ -0.06
PDLIM2-213ENST00000448520 AKAP3O75969 853 aa14.68□□□□□ -0.06
PDLIM2-213ENST00000448520 ITGB3P05106 788 aa14.68□□□□□ -0.06
PDLIM2-213ENST00000448520 POLR2BP30876 1174 aaKnown RBP14.68□□□□□ -0.06
PDLIM2-213ENST00000448520 DMWDQ09019 674 aa14.68□□□□□ -0.06
PDLIM2-213ENST00000448520 ADAM9Q13443 819 aa14.68□□□□□ -0.06
PDLIM2-213ENST00000448520 PDGFRLQ15198 375 aa14.68□□□□□ -0.06
PDLIM2-213ENST00000448520 HEATR6Q6AI08 1181 aaKnown RBP14.68□□□□□ -0.06
PDLIM2-213ENST00000448520 DPH6Q7L8W6 267 aa14.68□□□□□ -0.06
PDLIM2-213ENST00000448520 ARHGAP30Q7Z6I6 1101 aaPredicted RBP14.68□□□□□ -0.06
PDLIM2-213ENST00000448520 C12orf56Q8IXR9 622 aa14.68□□□□□ -0.06
PDLIM2-213ENST00000448520 ZC3H3Q8IXZ2 948 aaKnown RBP14.68□□□□□ -0.06
PDLIM2-213ENST00000448520 C1orf127Q8N9H9 656 aa14.68□□□□□ -0.06
PDLIM2-213ENST00000448520 ENOX1Q8TC92 643 aaKnown RBP14.68□□□□□ -0.06
PDLIM2-213ENST00000448520 USP13Q92995 863 aaPredicted RBP14.68□□□□□ -0.06
PDLIM2-213ENST00000448520 LOXL4Q96JB6 756 aa14.68□□□□□ -0.06
PDLIM2-213ENST00000448520 MYRFLQ96LU7 910 aa14.68□□□□□ -0.06
PDLIM2-213ENST00000448520 PI4K2AQ9BTU6 479 aa14.68□□□□□ -0.06
PDLIM2-213ENST00000448520 SMG9Q9H0W8 520 aaKnown RBP14.68□□□□□ -0.06
PDLIM2-213ENST00000448520 HSD3B7Q9H2F3 369 aa14.68□□□□□ -0.06
PDLIM2-213ENST00000448520 TMLHEQ9NVH6 421 aa14.68□□□□□ -0.06
PDLIM2-213ENST00000448520 FANCLQ9NW38 375 aa14.68□□□□□ -0.06
PDLIM2-213ENST00000448520 DDX43Q9NXZ2 648 aaKnown RBP14.68□□□□□ -0.06
PDLIM2-213ENST00000448520 RBAKQ9NYW8 714 aaPredicted RBP14.68□□□□□ -0.06
PDLIM2-213ENST00000448520 MAGED2Q9UNF1 606 aaPredicted RBP14.68□□□□□ -0.06
PDLIM2-213ENST00000448520 DCDC2BA2VCK2 349 aa14.67□□□□□ -0.06
PDLIM2-213ENST00000448520 SLC30A4O14863 429 aa14.67□□□□□ -0.06
PDLIM2-213ENST00000448520 EXOC3O60645 756 aa14.67□□□□□ -0.06
PDLIM2-213ENST00000448520 DRD1P21728 446 aa14.67□□□□□ -0.06
PDLIM2-213ENST00000448520 PCSK1P29120 753 aa14.67□□□□□ -0.06
PDLIM2-213ENST00000448520 CDR1P51861 262 aa14.67□□□□□ -0.06
PDLIM2-213ENST00000448520 MYL5Q02045 173 aa14.67□□□□□ -0.06
PDLIM2-213ENST00000448520 SURF1Q15526 300 aa14.67□□□□□ -0.06
PDLIM2-213ENST00000448520 NFIL3Q16649 462 aa14.67□□□□□ -0.06
PDLIM2-213ENST00000448520 TPD52L1Q16890 204 aaPredicted RBP14.67□□□□□ -0.06
PDLIM2-213ENST00000448520 FBXO43Q4G163 708 aa14.67□□□□□ -0.06
PDLIM2-213ENST00000448520 INTS6LQ5JSJ4 861 aaKnown RBP14.67□□□□□ -0.06
PDLIM2-213ENST00000448520 TXNDC8Q6A555 127 aa14.67□□□□□ -0.06
PDLIM2-213ENST00000448520 IRF2BP1Q8IU81 584 aa14.67□□□□□ -0.06
PDLIM2-213ENST00000448520 GPD1LQ8N335 351 aa14.67□□□□□ -0.06
PDLIM2-213ENST00000448520 CAMKK1Q8N5S9 505 aa14.67□□□□□ -0.06
PDLIM2-213ENST00000448520 TOP6BLQ8N6T0 577 aa14.67□□□□□ -0.06
PDLIM2-213ENST00000448520 XXYLT1Q8NBI6 393 aa14.67□□□□□ -0.06
PDLIM2-213ENST00000448520 GOLGA5Q8TBA6 731 aa14.67□□□□□ -0.06
PDLIM2-213ENST00000448520 PLEKHO2Q8TD55 490 aa14.67□□□□□ -0.06
PDLIM2-213ENST00000448520 TRMT2BQ96GJ1 504 aaKnown RBP14.67□□□□□ -0.06
PDLIM2-213ENST00000448520 FUBP3Q96I24 572 aaKnown RBP eCLIP14.67□□□□□ -0.06
PDLIM2-213ENST00000448520 BPIFA3Q9BQP9 254 aa14.67□□□□□ -0.06
PDLIM2-213ENST00000448520 NAT10Q9H0A0 1025 aaKnown RBP14.67□□□□□ -0.06
PDLIM2-213ENST00000448520 EBF3Q9H4W6 596 aa14.67□□□□□ -0.06
PDLIM2-213ENST00000448520 HPS4Q9NQG7 708 aa14.67□□□□□ -0.06
PDLIM2-213ENST00000448520 L1RE1Q9UN81 338 aa14.67□□□□□ -0.06
PDLIM2-213ENST00000448520 SLC8A2Q9UPR5 921 aa14.67□□□□□ -0.06
PDLIM2-213ENST00000448520 DYNC1LI1Q9Y6G9 523 aaKnown RBP14.67□□□□□ -0.06
PDLIM2-213ENST00000448520 CACNA1BQ00975 2339 aa14.67□□□□□ -0.06
PDLIM2-213ENST00000448520 GABRDO14764 452 aa14.66□□□□□ -0.06
PDLIM2-213ENST00000448520 CETN3O15182 167 aa14.66□□□□□ -0.06
PDLIM2-213ENST00000448520 NOL4O94818 638 aa14.66□□□□□ -0.06
PDLIM2-213ENST00000448520 KRT19P08727 400 aa14.66□□□□□ -0.06
PDLIM2-213ENST00000448520 CYP2F1P24903 491 aa14.66□□□□□ -0.06
PDLIM2-213ENST00000448520 SNRPFP62306 86 aaKnown RBP14.66□□□□□ -0.06
PDLIM2-213ENST00000448520 FKBP3Q00688 224 aaKnown RBP14.66□□□□□ -0.06
PDLIM2-213ENST00000448520 MYO1EQ12965 1108 aa14.66□□□□□ -0.06
PDLIM2-213ENST00000448520 SRSF5Q13243 272 aaKnown RBP14.66□□□□□ -0.06
PDLIM2-213ENST00000448520 DDR2Q16832 855 aa14.66□□□□□ -0.06
PDLIM2-213ENST00000448520 CFAP221Q4G0U5 840 aa14.66□□□□□ -0.06
PDLIM2-213ENST00000448520 CT47A1Q5JQC4 288 aaPredicted RBP14.66□□□□□ -0.06
PDLIM2-213ENST00000448520 PRR23CQ6ZRP0 262 aa14.66□□□□□ -0.06
PDLIM2-213ENST00000448520 CACNA2D4Q7Z3S7 1137 aa14.66□□□□□ -0.06
PDLIM2-213ENST00000448520 CREBRFQ8IUR6 639 aa14.66□□□□□ -0.06
PDLIM2-213ENST00000448520 SPATA2LQ8IUW3 424 aaPredicted RBP14.66□□□□□ -0.06
PDLIM2-213ENST00000448520 SLC9A9Q8IVB4 645 aa14.66□□□□□ -0.06
PDLIM2-213ENST00000448520 FAM160A2Q8N612 972 aaPredicted RBP14.66□□□□□ -0.06
PDLIM2-213ENST00000448520 CXorf38Q8TB03 319 aa14.66□□□□□ -0.06
PDLIM2-213ENST00000448520 DDX1Q92499 740 aaKnown RBP14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms