RNA–Protein interactions for RNA: ENST00000447375.1

SSR4-205, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 2

Gene SSR4, Length 427 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-205ENST00000447375 DPYSL4O14531 572 aa13.34□□□□□ -0.27
SSR4-205ENST00000447375 MAPK13O15264 365 aa13.34□□□□□ -0.27
SSR4-205ENST00000447375 ITGB3P05106 788 aa13.34□□□□□ -0.27
SSR4-205ENST00000447375 TYMPP19971 482 aa13.34□□□□□ -0.27
SSR4-205ENST00000447375 GBP1P32455 592 aa13.34□□□□□ -0.27
SSR4-205ENST00000447375 PNPLA4P41247 253 aa13.34□□□□□ -0.27
SSR4-205ENST00000447375 CASP4P49662 377 aa13.34□□□□□ -0.27
SSR4-205ENST00000447375 TAF6P49848 677 aa13.34□□□□□ -0.27
SSR4-205ENST00000447375 IRX4P78413 519 aa13.34□□□□□ -0.27
SSR4-205ENST00000447375 RBP5P82980 135 aa13.34□□□□□ -0.27
SSR4-205ENST00000447375 EDRF1Q3B7T1 1238 aa13.34□□□□□ -0.27
SSR4-205ENST00000447375 TPGS2Q68CL5 300 aa13.34□□□□□ -0.27
SSR4-205ENST00000447375 SCARA3Q6AZY7 606 aa13.34□□□□□ -0.27
SSR4-205ENST00000447375 DSTYKQ6XUX3 929 aa13.34□□□□□ -0.27
SSR4-205ENST00000447375 ARID3BQ8IVW6 561 aaPredicted RBP13.34□□□□□ -0.27
SSR4-205ENST00000447375 LRRC52Q8N7C0 313 aa13.34□□□□□ -0.27
SSR4-205ENST00000447375 ADAM32Q8TC27 787 aa13.34□□□□□ -0.27
SSR4-205ENST00000447375 PARD3BQ8TEW8 1205 aa13.34□□□□□ -0.27
SSR4-205ENST00000447375 ZNF516Q92618 1163 aa13.34□□□□□ -0.27
SSR4-205ENST00000447375 CCDC127Q96BQ5 260 aa13.34□□□□□ -0.27
SSR4-205ENST00000447375 ANKRD36BP1Q96IX9 119 aa13.34□□□□□ -0.27
SSR4-205ENST00000447375 FAM84AQ96KN4 292 aa13.34□□□□□ -0.27
SSR4-205ENST00000447375 GBP4Q96PP9 640 aa13.34□□□□□ -0.27
SSR4-205ENST00000447375 HHIPQ96QV1 700 aa13.34□□□□□ -0.27
SSR4-205ENST00000447375 FNBP1Q96RU3 617 aa13.34□□□□□ -0.27
SSR4-205ENST00000447375 CGRRF1Q99675 332 aa13.34□□□□□ -0.27
SSR4-205ENST00000447375 OXCT2Q9BYC2 517 aaPredicted RBP13.34□□□□□ -0.27
SSR4-205ENST00000447375 MTMR12Q9C0I1 747 aa13.34□□□□□ -0.27
SSR4-205ENST00000447375 SIX4Q9UIU6 781 aa13.34□□□□□ -0.27
SSR4-205ENST00000447375 AGAP1Q9UPQ3 857 aa13.34□□□□□ -0.27
SSR4-205ENST00000447375 FREM2Q5SZK8 3169 aa13.34□□□□□ -0.27
SSR4-205ENST00000447375 ASH1LQ9NR48 2969 aaKnown RBP13.33□□□□□ -0.28
SSR4-205ENST00000447375 A0A1W2PRU2 124 aa13.33□□□□□ -0.28
SSR4-205ENST00000447375 KPNA7A9QM74 516 aa13.33□□□□□ -0.28
SSR4-205ENST00000447375 H0Y626 953 aa13.33□□□□□ -0.28
SSR4-205ENST00000447375 CYB561D2O14569 222 aa13.33□□□□□ -0.28
SSR4-205ENST00000447375 TRIM16O95361 564 aa13.33□□□□□ -0.28
SSR4-205ENST00000447375 TNNC2P02585 160 aa13.33□□□□□ -0.28
SSR4-205ENST00000447375 CYP11A1P05108 521 aa13.33□□□□□ -0.28
SSR4-205ENST00000447375 TMEM191BP0C7N4 346 aa13.33□□□□□ -0.28
SSR4-205ENST00000447375 DLATP10515 647 aaKnown RBP13.33□□□□□ -0.28
SSR4-205ENST00000447375 ODC1P11926 461 aa13.33□□□□□ -0.28
SSR4-205ENST00000447375 TNNI1P19237 187 aa13.33□□□□□ -0.28
SSR4-205ENST00000447375 BMP6P22004 513 aa13.33□□□□□ -0.28
SSR4-205ENST00000447375 NR2F2P24468 414 aa13.33□□□□□ -0.28
SSR4-205ENST00000447375 RPL13P26373 211 aaKnown RBP13.33□□□□□ -0.28
SSR4-205ENST00000447375 POLR2BP30876 1174 aaKnown RBP13.33□□□□□ -0.28
SSR4-205ENST00000447375 MCCD1P59942 119 aaPredicted RBP13.33□□□□□ -0.28
SSR4-205ENST00000447375 SIM1P81133 766 aaPredicted RBP13.33□□□□□ -0.28
SSR4-205ENST00000447375 YWHAHQ04917 246 aaPredicted RBP13.33□□□□□ -0.28
SSR4-205ENST00000447375 TNK2Q07912 1038 aa13.33□□□□□ -0.28
SSR4-205ENST00000447375 GRSF1Q12849 480 aaKnown RBP eCLIP13.33□□□□□ -0.28
SSR4-205ENST00000447375 MORC3Q14149 939 aa13.33□□□□□ -0.28
SSR4-205ENST00000447375 ITPRIPL2Q3MIP1 535 aa13.33□□□□□ -0.28
SSR4-205ENST00000447375 SV2CQ496J9 727 aa13.33□□□□□ -0.28
SSR4-205ENST00000447375 LMBRD2Q68DH5 695 aaPredicted RBP13.33□□□□□ -0.28
SSR4-205ENST00000447375 FSTL4Q6MZW2 842 aa13.33□□□□□ -0.28
SSR4-205ENST00000447375 TRAPPC11Q7Z392 1133 aa13.33□□□□□ -0.28
SSR4-205ENST00000447375 PLEKHO2Q8TD55 490 aa13.33□□□□□ -0.28
SSR4-205ENST00000447375 GDAP2Q9NXN4 497 aa13.33□□□□□ -0.28
SSR4-205ENST00000447375 FBXL5Q9UKA1 691 aa13.33□□□□□ -0.28
SSR4-205ENST00000447375 DSEQ9UL01 958 aa13.33□□□□□ -0.28
SSR4-205ENST00000447375 FRMD4BQ9Y2L6 1034 aa13.33□□□□□ -0.28
SSR4-205ENST00000447375 TIMM13Q9Y5L4 95 aaPredicted RBP13.33□□□□□ -0.28
SSR4-205ENST00000447375 ITPR1Q14643 2758 aa13.32□□□□□ -0.28
SSR4-205ENST00000447375 FLNBO75369 2602 aaKnown RBP13.32□□□□□ -0.28
SSR4-205ENST00000447375 SCN1AP35498 2009 aa13.32□□□□□ -0.28
SSR4-205ENST00000447375 ATG2BQ96BY7 2078 aa13.32□□□□□ -0.28
SSR4-205ENST00000447375 NUP210Q8TEM1 1887 aaPredicted RBP13.32□□□□□ -0.28
SSR4-205ENST00000447375 ENPEPQ07075 957 aa13.32□□□□□ -0.28
SSR4-205ENST00000447375 SCAPQ12770 1279 aa13.32□□□□□ -0.28
SSR4-205ENST00000447375 ADAM9Q13443 819 aa13.32□□□□□ -0.28
SSR4-205ENST00000447375 CAMK4Q16566 473 aa13.32□□□□□ -0.28
SSR4-205ENST00000447375 CTXN3Q4LDR2 81 aa13.32□□□□□ -0.28
SSR4-205ENST00000447375 TMEM196Q5HYL7 178 aa13.32□□□□□ -0.28
SSR4-205ENST00000447375 CEP135Q66GS9 1140 aa13.32□□□□□ -0.28
SSR4-205ENST00000447375 ISM2Q6H9L7 571 aa13.32□□□□□ -0.28
SSR4-205ENST00000447375 ZNF280DQ6N043 979 aa13.32□□□□□ -0.28
SSR4-205ENST00000447375 USP37Q86T82 979 aa13.32□□□□□ -0.28
SSR4-205ENST00000447375 CHCHD4Q8N4Q1 142 aa13.32□□□□□ -0.28
SSR4-205ENST00000447375 TMC2Q8TDI7 906 aa13.32□□□□□ -0.28
SSR4-205ENST00000447375 HNRNPLLQ8WVV9 542 aaKnown RBP13.32□□□□□ -0.28
SSR4-205ENST00000447375 DHTKD1Q96HY7 919 aaPredicted RBP13.32□□□□□ -0.28
SSR4-205ENST00000447375 ZNF560Q96MR9 790 aa13.32□□□□□ -0.28
SSR4-205ENST00000447375 KIAA1468Q9P260 1216 aa13.32□□□□□ -0.28
SSR4-205ENST00000447375 EBF1Q9UH73 591 aa13.32□□□□□ -0.28
SSR4-205ENST00000447375 MAFFQ9ULX9 164 aa13.32□□□□□ -0.28
SSR4-205ENST00000447375 INVSQ9Y283 1065 aa13.32□□□□□ -0.28
SSR4-205ENST00000447375 OBSL1O75147 1896 aa13.31□□□□□ -0.28
SSR4-205ENST00000447375 OR6C75A6NL08 312 aa13.31□□□□□ -0.28
SSR4-205ENST00000447375 LRRIQ3A6PVS8 624 aaPredicted RBP13.31□□□□□ -0.28
SSR4-205ENST00000447375 PPP1R3GB7ZBB8 358 aa13.31□□□□□ -0.28
SSR4-205ENST00000447375 IKBKBO14920 756 aa13.31□□□□□ -0.28
SSR4-205ENST00000447375 RNF40O75150 1001 aa13.31□□□□□ -0.28
SSR4-205ENST00000447375 APBB3O95704 486 aa13.31□□□□□ -0.28
SSR4-205ENST00000447375 CST3P01034 146 aaPredicted RBP13.31□□□□□ -0.28
SSR4-205ENST00000447375 KRT19P08727 400 aa13.31□□□□□ -0.28
SSR4-205ENST00000447375 CD44P16070 742 aaKnown RBP13.31□□□□□ -0.28
SSR4-205ENST00000447375 PSMC2P35998 433 aaKnown RBP13.31□□□□□ -0.28
SSR4-205ENST00000447375 PPP1R2P41236 205 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms