RNA–Protein interactions for RNA: ENST00000447182.6

SDCBP-204, Transcript of syndecan binding protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SDCBP, Length 2,103 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-204ENST00000447182 ARMC2Q8NEN0 867 aa19.96■□□□□ 0.79
SDCBP-204ENST00000447182 JOSD2Q8TAC2 188 aa19.96■□□□□ 0.79
SDCBP-204ENST00000447182 MAF1Q9H063 256 aa19.96■□□□□ 0.79
SDCBP-204ENST00000447182 CNTN3Q9P232 1028 aa19.96■□□□□ 0.79
SDCBP-204ENST00000447182 ZNF214Q9UL59 606 aaPredicted RBP19.96■□□□□ 0.79
SDCBP-204ENST00000447182 ADAMTS5Q9UNA0 930 aa19.96■□□□□ 0.79
SDCBP-204ENST00000447182 CFAP69A5D8W1 941 aa19.96■□□□□ 0.79
SDCBP-204ENST00000447182 KLF11O14901 512 aa19.96■□□□□ 0.79
SDCBP-204ENST00000447182 FAM155BO75949 473 aa19.96■□□□□ 0.79
SDCBP-204ENST00000447182 CCNHP51946 323 aaPredicted RBP19.96■□□□□ 0.79
SDCBP-204ENST00000447182 PTK7Q13308 1070 aa19.96■□□□□ 0.79
SDCBP-204ENST00000447182 CAPSQ13938 189 aa19.96■□□□□ 0.79
SDCBP-204ENST00000447182 DPYSL3Q14195 570 aa19.96■□□□□ 0.79
SDCBP-204ENST00000447182 SURF1Q15526 300 aa19.96■□□□□ 0.79
SDCBP-204ENST00000447182 KCNT1Q5JUK3 1230 aa19.96■□□□□ 0.79
SDCBP-204ENST00000447182 DSTYKQ6XUX3 929 aa19.96■□□□□ 0.79
SDCBP-204ENST00000447182 CMASQ8NFW8 434 aaPredicted RBP19.96■□□□□ 0.79
SDCBP-204ENST00000447182 TMEM120AQ9BXJ8 343 aa19.96■□□□□ 0.79
SDCBP-204ENST00000447182 VPS33BQ9H267 617 aa19.96■□□□□ 0.79
SDCBP-204ENST00000447182 IGKV6D-21A0A0A0MT36 114 aa19.95■□□□□ 0.78
SDCBP-204ENST00000447182 PPP1R12AO14974 1030 aaPredicted RBP19.95■□□□□ 0.78
SDCBP-204ENST00000447182 TOM1L1O75674 476 aa19.95■□□□□ 0.78
SDCBP-204ENST00000447182 HARSP12081 509 aaKnown RBP19.95■□□□□ 0.78
SDCBP-204ENST00000447182 ICAM3P32942 547 aa19.95■□□□□ 0.78
SDCBP-204ENST00000447182 VHLP40337 213 aa19.95■□□□□ 0.78
SDCBP-204ENST00000447182 ASPAP45381 313 aa19.95■□□□□ 0.78
SDCBP-204ENST00000447182 EIF3EP60228 445 aaKnown RBP19.95■□□□□ 0.78
SDCBP-204ENST00000447182 DENND1BQ6P3S1 775 aa19.95■□□□□ 0.78
SDCBP-204ENST00000447182 SERAC1Q96JX3 654 aa19.95■□□□□ 0.78
SDCBP-204ENST00000447182 MYOZ2Q9NPC6 264 aa19.95■□□□□ 0.78
SDCBP-204ENST00000447182 WDR35Q9P2L0 1181 aa19.95■□□□□ 0.78
SDCBP-204ENST00000447182 CHMP2BQ9UQN3 213 aa19.95■□□□□ 0.78
SDCBP-204ENST00000447182 TEX264Q9Y6I9 313 aa19.95■□□□□ 0.78
SDCBP-204ENST00000447182 TCRBV9S1A1TA0A576 114 aa19.94■□□□□ 0.78
SDCBP-204ENST00000447182 MCF2LO15068 1137 aa19.94■□□□□ 0.78
SDCBP-204ENST00000447182 GYG2O15488 501 aa19.94■□□□□ 0.78
SDCBP-204ENST00000447182 WEE2P0C1S8 567 aa19.94■□□□□ 0.78
SDCBP-204ENST00000447182 SERPINB3P29508 390 aa19.94■□□□□ 0.78
SDCBP-204ENST00000447182 BACE1P56817 501 aa19.94■□□□□ 0.78
SDCBP-204ENST00000447182 ZNF200P98182 395 aaPredicted RBP19.94■□□□□ 0.78
SDCBP-204ENST00000447182 TNFAIP1Q13829 316 aa19.94■□□□□ 0.78
SDCBP-204ENST00000447182 LBRQ14739 615 aaKnown RBP19.94■□□□□ 0.78
SDCBP-204ENST00000447182 TARBP2Q15633 366 aaKnown RBP19.94■□□□□ 0.78
SDCBP-204ENST00000447182 IGDCC3Q8IVU1 814 aa19.94■□□□□ 0.78
SDCBP-204ENST00000447182 FAM71DQ8N9W8 422 aa19.94■□□□□ 0.78
SDCBP-204ENST00000447182 ZNF333Q96JL9 665 aa19.94■□□□□ 0.78
SDCBP-204ENST00000447182 SLC24A3Q9HC58 644 aa19.94■□□□□ 0.78
SDCBP-204ENST00000447182 IKBKGQ9Y6K9 419 aa19.94■□□□□ 0.78
SDCBP-204ENST00000447182 PHIPQ8WWQ0 1821 aa19.94■□□□□ 0.78
SDCBP-204ENST00000447182 NVLO15381 856 aaKnown RBP19.94■□□□□ 0.78
SDCBP-204ENST00000447182 MSCO60682 206 aa19.94■□□□□ 0.78
SDCBP-204ENST00000447182 CD48P09326 243 aa19.94■□□□□ 0.78
SDCBP-204ENST00000447182 STIP1P31948 543 aaKnown RBP19.94■□□□□ 0.78
SDCBP-204ENST00000447182 ELK3P41970 407 aa19.94■□□□□ 0.78
SDCBP-204ENST00000447182 BASP1P80723 227 aaKnown RBP19.94■□□□□ 0.78
SDCBP-204ENST00000447182 TRPC3Q13507 836 aa19.94■□□□□ 0.78
SDCBP-204ENST00000447182 ACAP1Q15027 740 aa19.94■□□□□ 0.78
SDCBP-204ENST00000447182 WDR78Q5VTH9 848 aa19.94■□□□□ 0.78
SDCBP-204ENST00000447182 FAM111AQ96PZ2 611 aa19.94■□□□□ 0.78
SDCBP-204ENST00000447182 XYLT2Q9H1B5 865 aa19.94■□□□□ 0.78
SDCBP-204ENST00000447182 ALG13Q9NP73 1137 aaKnown RBP19.94■□□□□ 0.78
SDCBP-204ENST00000447182 PNPLA8Q9NP80 782 aa19.94■□□□□ 0.78
SDCBP-204ENST00000447182 CYTH4Q9UIA0 394 aa19.94■□□□□ 0.78
SDCBP-204ENST00000447182 SCAF8Q9UPN6 1271 aaKnown RBP19.94■□□□□ 0.78
SDCBP-204ENST00000447182 TTLL13PA6NNM8 815 aa19.93■□□□□ 0.78
SDCBP-204ENST00000447182 MED7O43513 233 aa19.93■□□□□ 0.78
SDCBP-204ENST00000447182 INHBAP08476 426 aa19.93■□□□□ 0.78
SDCBP-204ENST00000447182 RBP3P10745 1247 aa19.93■□□□□ 0.78
SDCBP-204ENST00000447182 EFNA5P52803 228 aa19.93■□□□□ 0.78
SDCBP-204ENST00000447182 OCRLQ01968 901 aa19.93■□□□□ 0.78
SDCBP-204ENST00000447182 ZBTB16Q05516 673 aa19.93■□□□□ 0.78
SDCBP-204ENST00000447182 KLC1Q07866 573 aa19.93■□□□□ 0.78
SDCBP-204ENST00000447182 KBTBD12Q3ZCT8 623 aa19.93■□□□□ 0.78
SDCBP-204ENST00000447182 APBB1IPQ7Z5R6 666 aaPredicted RBP19.93■□□□□ 0.78
SDCBP-204ENST00000447182 RFX6Q8HWS3 928 aa19.93■□□□□ 0.78
SDCBP-204ENST00000447182 TTLL6Q8N841 843 aa19.93■□□□□ 0.78
SDCBP-204ENST00000447182 KCTD6Q8NC69 237 aa19.93■□□□□ 0.78
SDCBP-204ENST00000447182 FAM136AQ96C01 138 aa19.93■□□□□ 0.78
SDCBP-204ENST00000447182 MRPL4Q9BYD3 311 aaKnown RBP19.93■□□□□ 0.78
SDCBP-204ENST00000447182 NMRK1Q9NWW6 199 aa19.93■□□□□ 0.78
SDCBP-204ENST00000447182 OGTO15294 1046 aa19.93■□□□□ 0.78
SDCBP-204ENST00000447182 PSMC1P62191 440 aaKnown RBP19.93■□□□□ 0.78
SDCBP-204ENST00000447182 FAAP100Q0VG06 881 aa19.93■□□□□ 0.78
SDCBP-204ENST00000447182 KCNJ11Q14654 390 aa19.93■□□□□ 0.78
SDCBP-204ENST00000447182 MUM1Q2TAK8 710 aa19.93■□□□□ 0.78
SDCBP-204ENST00000447182 ZNF699Q32M78 642 aa19.93■□□□□ 0.78
SDCBP-204ENST00000447182 ACSBG2Q5FVE4 666 aa19.93■□□□□ 0.78
SDCBP-204ENST00000447182 ACAD9Q9H845 621 aa19.93■□□□□ 0.78
SDCBP-204ENST00000447182 RSAD1Q9HA92 442 aa19.93■□□□□ 0.78
SDCBP-204ENST00000447182 FBXO6Q9NRD1 293 aaPredicted RBP19.93■□□□□ 0.78
SDCBP-204ENST00000447182 TAS2R1Q9NYW7 299 aa19.93■□□□□ 0.78
SDCBP-204ENST00000447182 TJP2Q9UDY2 1190 aa19.93■□□□□ 0.78
SDCBP-204ENST00000447182 DPPA5A6NC42 116 aa19.92■□□□□ 0.78
SDCBP-204ENST00000447182 KBTBD13C9JR72 458 aa19.92■□□□□ 0.78
SDCBP-204ENST00000447182 ITGBL1O95965 494 aaPredicted RBP19.92■□□□□ 0.78
SDCBP-204ENST00000447182 RARBP10826 455 aa19.92■□□□□ 0.78
SDCBP-204ENST00000447182 PYGBP11216 843 aa19.92■□□□□ 0.78
SDCBP-204ENST00000447182 BGNP21810 368 aa19.92■□□□□ 0.78
SDCBP-204ENST00000447182 CCDC62Q6P9F0 684 aa19.92■□□□□ 0.78
SDCBP-204ENST00000447182 XYLT1Q86Y38 959 aa19.92■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms