RNA–Protein interactions for RNA: ENST00000446349.5

PTPN3-204, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

TSL 1 (best) BASIC

Gene PTPN3, Length 8,630 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-204ENST00000446349 MAGEB10Q96LZ2 347 aaPredicted RBP8.87□□□□□ -0.99
PTPN3-204ENST00000446349 TBCBQ99426 244 aa8.87□□□□□ -0.99
PTPN3-204ENST00000446349 PRRG3Q9BZD7 231 aa8.87□□□□□ -0.99
PTPN3-204ENST00000446349 CARD9Q9H257 536 aa8.87□□□□□ -0.99
PTPN3-204ENST00000446349 CPA4Q9UI42 421 aa8.87□□□□□ -0.99
PTPN3-204ENST00000446349 M0QYT0 321 aa8.87□□□□□ -0.99
PTPN3-204ENST00000446349 MYBP10242 640 aa8.87□□□□□ -0.99
PTPN3-204ENST00000446349 SERPINB10P48595 397 aa8.87□□□□□ -0.99
PTPN3-204ENST00000446349 GALCP54803 685 aa8.87□□□□□ -0.99
PTPN3-204ENST00000446349 RNF135Q8IUD6 432 aa8.87□□□□□ -0.99
PTPN3-204ENST00000446349 MMGT1Q8N4V1 131 aa8.87□□□□□ -0.99
PTPN3-204ENST00000446349 CLPBQ9H078 707 aa8.87□□□□□ -0.99
PTPN3-204ENST00000446349 MFSD1Q9H3U5 465 aa8.87□□□□□ -0.99
PTPN3-204ENST00000446349 SNX12Q9UMY4 172 aa8.87□□□□□ -0.99
PTPN3-204ENST00000446349 COL1A2P08123 1366 aa8.87□□□□□ -0.99
PTPN3-204ENST00000446349 FGFR2P21802 821 aa8.87□□□□□ -0.99
PTPN3-204ENST00000446349 TFDP3Q5H9I0 405 aa8.87□□□□□ -0.99
PTPN3-204ENST00000446349 HABP4Q5JVS0 413 aaKnown RBP8.87□□□□□ -0.99
PTPN3-204ENST00000446349 DEFB132Q7Z7B7 95 aa8.87□□□□□ -0.99
PTPN3-204ENST00000446349 EXD1Q8NHP7 514 aa8.87□□□□□ -0.99
PTPN3-204ENST00000446349 SYTL5Q8TDW5 730 aaPredicted RBP8.87□□□□□ -0.99
PTPN3-204ENST00000446349 CLMNQ96JQ2 1002 aa8.87□□□□□ -0.99
PTPN3-204ENST00000446349 ASCC2Q9H1I8 757 aaPredicted RBP8.87□□□□□ -0.99
PTPN3-204ENST00000446349 DMAP1Q9NPF5 467 aaPredicted RBP8.87□□□□□ -0.99
PTPN3-204ENST00000446349 H2AFY2Q9P0M6 372 aaPredicted RBP8.87□□□□□ -0.99
PTPN3-204ENST00000446349 CAMSAP3Q9P1Y5 1249 aaPredicted RBP8.87□□□□□ -0.99
PTPN3-204ENST00000446349 AFDNP55196 1824 aaKnown RBP8.87□□□□□ -0.99
PTPN3-204ENST00000446349 C16orf96A6NNT2 1141 aa8.87□□□□□ -0.99
PTPN3-204ENST00000446349 QSOX1O00391 747 aa8.87□□□□□ -0.99
PTPN3-204ENST00000446349 PDE2AO00408 941 aaPredicted RBP8.87□□□□□ -0.99
PTPN3-204ENST00000446349 LAMTOR4Q0VGL1 99 aa8.87□□□□□ -0.99
PTPN3-204ENST00000446349 CACHD1Q5VU97 1274 aa8.87□□□□□ -0.99
PTPN3-204ENST00000446349 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.87□□□□□ -0.99
PTPN3-204ENST00000446349 STARD8Q92502 1023 aa8.87□□□□□ -0.99
PTPN3-204ENST00000446349 GPRC5DQ9NZD1 345 aa8.87□□□□□ -0.99
PTPN3-204ENST00000446349 ADA2Q9NZK5 511 aa8.87□□□□□ -0.99
PTPN3-204ENST00000446349 SLIT3O75094 1523 aa8.87□□□□□ -0.99
PTPN3-204ENST00000446349 MEGF6O75095 1541 aa8.87□□□□□ -0.99
PTPN3-204ENST00000446349 SLCO1B7G3V0H7 640 aa8.87□□□□□ -0.99
PTPN3-204ENST00000446349 KRT20P35900 424 aa8.87□□□□□ -0.99
PTPN3-204ENST00000446349 TRIM68Q6AZZ1 485 aa8.87□□□□□ -0.99
PTPN3-204ENST00000446349 LRRC8EQ6NSJ5 796 aa8.87□□□□□ -0.99
PTPN3-204ENST00000446349 ZNF555Q8NEP9 628 aa8.87□□□□□ -0.99
PTPN3-204ENST00000446349 ZNF668Q96K58 619 aaPredicted RBP8.87□□□□□ -0.99
PTPN3-204ENST00000446349 RNF208Q9H0X6 261 aa8.87□□□□□ -0.99
PTPN3-204ENST00000446349 EPB41L4AQ9HCS5 686 aaPredicted RBP8.87□□□□□ -0.99
PTPN3-204ENST00000446349 SERPIND1P05546 499 aa8.87□□□□□ -0.99
PTPN3-204ENST00000446349 TGM2P21980 687 aa8.87□□□□□ -0.99
PTPN3-204ENST00000446349 RXRGP48443 463 aa8.87□□□□□ -0.99
PTPN3-204ENST00000446349 PPP3CCP48454 512 aa8.87□□□□□ -0.99
PTPN3-204ENST00000446349 RASGRP2Q7LDG7 609 aa8.87□□□□□ -0.99
PTPN3-204ENST00000446349 DDI1Q8WTU0 396 aa8.87□□□□□ -0.99
PTPN3-204ENST00000446349 CDCA5Q96FF9 252 aa8.87□□□□□ -0.99
PTPN3-204ENST00000446349 APBA2Q99767 749 aa8.87□□□□□ -0.99
PTPN3-204ENST00000446349 CDYLQ9Y232 598 aa8.87□□□□□ -0.99
PTPN3-204ENST00000446349 EIF3LQ9Y262 564 aaKnown RBP8.87□□□□□ -0.99
PTPN3-204ENST00000446349 RPTORQ8N122 1335 aa8.86□□□□□ -0.99
PTPN3-204ENST00000446349 WNT10BO00744 389 aa8.86□□□□□ -0.99
PTPN3-204ENST00000446349 RHOBTB1O94844 696 aa8.86□□□□□ -0.99
PTPN3-204ENST00000446349 ALOX15P16050 662 aaPredicted RBP8.86□□□□□ -0.99
PTPN3-204ENST00000446349 SESN2P58004 480 aaPredicted RBP8.86□□□□□ -0.99
PTPN3-204ENST00000446349 PRKAA1Q13131 559 aa8.86□□□□□ -0.99
PTPN3-204ENST00000446349 NBPF12Q5TAG4 269 aaPredicted RBP8.86□□□□□ -0.99
PTPN3-204ENST00000446349 FBXO16Q8IX29 292 aaPredicted RBP8.86□□□□□ -0.99
PTPN3-204ENST00000446349 C17orf53Q8N3J3 647 aaPredicted RBP8.86□□□□□ -0.99
PTPN3-204ENST00000446349 PHC3Q8NDX5 983 aa8.86□□□□□ -0.99
PTPN3-204ENST00000446349 PRKD2Q9BZL6 878 aa8.86□□□□□ -0.99
PTPN3-204ENST00000446349 STARD13Q9Y3M8 1113 aa8.86□□□□□ -0.99
PTPN3-204ENST00000446349 NEU2Q9Y3R4 380 aa8.86□□□□□ -0.99
PTPN3-204ENST00000446349 KANSL1LA0AUZ9 987 aa8.86□□□□□ -0.99
PTPN3-204ENST00000446349 C2CD2LO14523 706 aa8.86□□□□□ -0.99
PTPN3-204ENST00000446349 PAEPP09466 180 aa8.86□□□□□ -0.99
PTPN3-204ENST00000446349 JAK1P23458 1154 aa8.86□□□□□ -0.99
PTPN3-204ENST00000446349 RPL9P32969 192 aaKnown RBP8.86□□□□□ -0.99
PTPN3-204ENST00000446349 SLC7A5Q01650 507 aa8.86□□□□□ -0.99
PTPN3-204ENST00000446349 PGM5Q15124 567 aa8.86□□□□□ -0.99
PTPN3-204ENST00000446349 RGMBQ6NW40 437 aa8.86□□□□□ -0.99
PTPN3-204ENST00000446349 MYO1HQ8N1T3 1032 aa8.86□□□□□ -0.99
PTPN3-204ENST00000446349 TRIML2Q8N7C3 387 aa8.86□□□□□ -0.99
PTPN3-204ENST00000446349 KCNB2Q92953 911 aa8.86□□□□□ -0.99
PTPN3-204ENST00000446349 TMEM176AQ96HP8 235 aa8.86□□□□□ -0.99
PTPN3-204ENST00000446349 ZNF558Q96NG5 402 aa8.86□□□□□ -0.99
PTPN3-204ENST00000446349 TACO1Q9BSH4 297 aaKnown RBP8.86□□□□□ -0.99
PTPN3-204ENST00000446349 VIPAS39Q9H9C1 493 aa8.86□□□□□ -0.99
PTPN3-204ENST00000446349 GMNCA6NCL1 334 aa8.86□□□□□ -0.99
PTPN3-204ENST00000446349 SUPT3HB4E1H0 165 aa8.86□□□□□ -0.99
PTPN3-204ENST00000446349 POMCP01189 267 aa8.86□□□□□ -0.99
PTPN3-204ENST00000446349 IFNA14P01570 189 aa8.86□□□□□ -0.99
PTPN3-204ENST00000446349 POU4F1Q01851 419 aa8.86□□□□□ -0.99
PTPN3-204ENST00000446349 CPA5Q8WXQ8 436 aa8.86□□□□□ -0.99
PTPN3-204ENST00000446349 REPS1Q96D71 796 aa8.86□□□□□ -0.99
PTPN3-204ENST00000446349 SLC13A1Q9BZW2 595 aa8.86□□□□□ -0.99
PTPN3-204ENST00000446349 MRPL17Q9NRX2 175 aaKnown RBP8.86□□□□□ -0.99
PTPN3-204ENST00000446349 FAM49BQ9NUQ9 324 aa8.86□□□□□ -0.99
PTPN3-204ENST00000446349 DCDC2Q9UHG0 476 aa8.86□□□□□ -0.99
PTPN3-204ENST00000446349 RNF103-CHMP3A0A140T963 221 aa8.86□□□□□ -0.99
PTPN3-204ENST00000446349 ASGR1P07306 291 aa8.86□□□□□ -0.99
PTPN3-204ENST00000446349 CAPZA2P47755 286 aa8.86□□□□□ -0.99
PTPN3-204ENST00000446349 MYL6P60660 151 aa8.86□□□□□ -0.99
PTPN3-204ENST00000446349 GRAMD1BQ3KR37 738 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms