RNA–Protein interactions for RNA: ENST00000444951.5

LIME1-202, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 3

Gene LIME1, Length 451 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-202ENST00000444951 MYO6Q9UM54 1294 aa18.25■□□□□ 0.51
LIME1-202ENST00000444951 SLC27A5Q9Y2P5 690 aa18.25■□□□□ 0.51
LIME1-202ENST00000444951 PCDHB5Q9Y5E4 795 aa18.25■□□□□ 0.51
LIME1-202ENST00000444951 MTMR11A4FU01 709 aa18.24■□□□□ 0.51
LIME1-202ENST00000444951 GOLGA6L6A8MZA4 724 aa18.24■□□□□ 0.51
LIME1-202ENST00000444951 CYP11B1P15538 503 aa18.24■□□□□ 0.51
LIME1-202ENST00000444951 BDNFP23560 247 aa18.24■□□□□ 0.51
LIME1-202ENST00000444951 PTPN5P54829 565 aa18.24■□□□□ 0.51
LIME1-202ENST00000444951 BPIFB4P59827 614 aa18.24■□□□□ 0.51
LIME1-202ENST00000444951 ADCY1Q08828 1119 aa18.24■□□□□ 0.51
LIME1-202ENST00000444951 MTMR3Q13615 1198 aa18.24■□□□□ 0.51
LIME1-202ENST00000444951 RAB33AQ14088 237 aa18.24■□□□□ 0.51
LIME1-202ENST00000444951 NFE2Q16621 373 aaPredicted RBP18.24■□□□□ 0.51
LIME1-202ENST00000444951 C4orf50Q6ZRC1 276 aa18.24■□□□□ 0.51
LIME1-202ENST00000444951 GPR149Q86SP6 731 aa18.24■□□□□ 0.51
LIME1-202ENST00000444951 NOP9Q86U38 636 aaKnown RBP18.24■□□□□ 0.51
LIME1-202ENST00000444951 CNGA4Q8IV77 575 aa18.24■□□□□ 0.51
LIME1-202ENST00000444951 ZDHHC14Q8IZN3 488 aa18.24■□□□□ 0.51
LIME1-202ENST00000444951 OR8K1Q8NGG5 319 aa18.24■□□□□ 0.51
LIME1-202ENST00000444951 SLC20A1Q8WUM9 679 aa18.24■□□□□ 0.51
LIME1-202ENST00000444951 ZSWIM1Q9BR11 485 aa18.24■□□□□ 0.51
LIME1-202ENST00000444951 ZNF518BQ9C0D4 1074 aa18.24■□□□□ 0.51
LIME1-202ENST00000444951 PDCL3Q9H2J4 239 aa18.24■□□□□ 0.51
LIME1-202ENST00000444951 TGM5O43548 720 aa18.23■□□□□ 0.51
LIME1-202ENST00000444951 SOAT2O75908 522 aa18.23■□□□□ 0.51
LIME1-202ENST00000444951 GLUD1P00367 558 aa18.23■□□□□ 0.51
LIME1-202ENST00000444951 CCDC172P0C7W6 258 aa18.23■□□□□ 0.51
LIME1-202ENST00000444951 CYP2F1P24903 491 aa18.23■□□□□ 0.51
LIME1-202ENST00000444951 ELF1P32519 619 aa18.23■□□□□ 0.51
LIME1-202ENST00000444951 DUSP4Q13115 394 aa18.23■□□□□ 0.51
LIME1-202ENST00000444951 IRF2BP2Q7Z5L9 587 aa18.23■□□□□ 0.51
LIME1-202ENST00000444951 PASD1Q8IV76 773 aa18.23■□□□□ 0.51
LIME1-202ENST00000444951 SCN4BQ8IWT1 228 aa18.23■□□□□ 0.51
LIME1-202ENST00000444951 FUKQ8N0W3 1084 aa18.23■□□□□ 0.51
LIME1-202ENST00000444951 TTC9BQ8N6N2 239 aa18.23■□□□□ 0.51
LIME1-202ENST00000444951 UBA3Q8TBC4 463 aa18.23■□□□□ 0.51
LIME1-202ENST00000444951 ZNF606Q8WXB4 792 aa18.23■□□□□ 0.51
LIME1-202ENST00000444951 SEPT5Q99719 369 aaPredicted RBP18.23■□□□□ 0.51
LIME1-202ENST00000444951 NUCKS1Q9H1E3 243 aaKnown RBP18.23■□□□□ 0.51
LIME1-202ENST00000444951 CYP4F11Q9HBI6 524 aa18.23■□□□□ 0.51
LIME1-202ENST00000444951 MAN1C1Q9NR34 630 aa18.23■□□□□ 0.51
LIME1-202ENST00000444951 KRT82Q9NSB4 513 aa18.23■□□□□ 0.51
LIME1-202ENST00000444951 ABHD10Q9NUJ1 306 aa18.23■□□□□ 0.51
LIME1-202ENST00000444951 SEPT11Q9NVA2 429 aaKnown RBP18.23■□□□□ 0.51
LIME1-202ENST00000444951 ZNHIT6Q9NWK9 470 aaKnown RBP18.23■□□□□ 0.51
LIME1-202ENST00000444951 AIPL1Q9NZN9 384 aa18.23■□□□□ 0.51
LIME1-202ENST00000444951 KIAA1257Q9ULG3 409 aa18.23■□□□□ 0.51
LIME1-202ENST00000444951 ATP8B3O60423 1300 aa18.23■□□□□ 0.51
LIME1-202ENST00000444951 M0QYV0 167 aa18.22■□□□□ 0.51
LIME1-202ENST00000444951 O00370 1275 aa18.22■□□□□ 0.51
LIME1-202ENST00000444951 PRRG1O14668 218 aa18.22■□□□□ 0.51
LIME1-202ENST00000444951 MED7O43513 233 aa18.22■□□□□ 0.51
LIME1-202ENST00000444951 AP1G2O75843 785 aa18.22■□□□□ 0.51
LIME1-202ENST00000444951 VNN2O95498 520 aa18.22■□□□□ 0.51
LIME1-202ENST00000444951 CFHP08603 1231 aa18.22■□□□□ 0.51
LIME1-202ENST00000444951 KLHL30Q0D2K2 578 aa18.22■□□□□ 0.51
LIME1-202ENST00000444951 ARID5BQ14865 1188 aa18.22■□□□□ 0.51
LIME1-202ENST00000444951 MGAT5BQ3V5L5 792 aa18.22■□□□□ 0.51
LIME1-202ENST00000444951 TDRD12Q587J7 1177 aaKnown RBP18.22■□□□□ 0.51
LIME1-202ENST00000444951 TPGS2Q68CL5 300 aa18.22■□□□□ 0.51
LIME1-202ENST00000444951 PAQR9Q6ZVX9 377 aa18.22■□□□□ 0.51
LIME1-202ENST00000444951 FAM35AQ86V20 835 aa18.22■□□□□ 0.51
LIME1-202ENST00000444951 UBALD2Q8IYN6 164 aa18.22■□□□□ 0.51
LIME1-202ENST00000444951 TC2NQ8N9U0 490 aa18.22■□□□□ 0.51
LIME1-202ENST00000444951 ZNF461Q8TAF7 563 aa18.22■□□□□ 0.51
LIME1-202ENST00000444951 EPS8L1Q8TE68 723 aa18.22■□□□□ 0.51
LIME1-202ENST00000444951 HNRNPABQ99729 332 aaKnown RBP18.22■□□□□ 0.51
LIME1-202ENST00000444951 IMPACTQ9P2X3 320 aa18.22■□□□□ 0.51
LIME1-202ENST00000444951 HESX1Q9UBX0 185 aa18.22■□□□□ 0.51
LIME1-202ENST00000444951 AFF4Q9UHB7 1163 aaKnown RBP18.22■□□□□ 0.51
LIME1-202ENST00000444951 TSPAN16Q9UKR8 245 aa18.22■□□□□ 0.51
LIME1-202ENST00000444951 USTQ9Y2C2 406 aa18.22■□□□□ 0.51
LIME1-202ENST00000444951 VPS13AQ96RL7 3174 aa18.22■□□□□ 0.51
LIME1-202ENST00000444951 DOCK8Q8NF50 2099 aa18.21■□□□□ 0.51
LIME1-202ENST00000444951 SPDYE4A6NLX3 237 aa18.21■□□□□ 0.51
LIME1-202ENST00000444951 MICAL2O94851 1124 aa18.21■□□□□ 0.51
LIME1-202ENST00000444951 ABLIM3O94929 683 aa18.21■□□□□ 0.51
LIME1-202ENST00000444951 SEC24AO95486 1093 aa18.21■□□□□ 0.51
LIME1-202ENST00000444951 MMEP08473 750 aa18.21■□□□□ 0.51
LIME1-202ENST00000444951 FAM200BP0CF97 657 aa18.21■□□□□ 0.51
LIME1-202ENST00000444951 GRIK1P39086 918 aa18.21■□□□□ 0.51
LIME1-202ENST00000444951 CACNA2D1P54289 1103 aa18.21■□□□□ 0.51
LIME1-202ENST00000444951 ARHGAP17Q68EM7 881 aa18.21■□□□□ 0.51
LIME1-202ENST00000444951 DENND1BQ6P3S1 775 aa18.21■□□□□ 0.51
LIME1-202ENST00000444951 FMNL3Q8IVF7 1028 aa18.21■□□□□ 0.51
LIME1-202ENST00000444951 TMEM105Q8N8V8 129 aa18.21■□□□□ 0.51
LIME1-202ENST00000444951 SPPL2BQ8TCT7 592 aa18.21■□□□□ 0.51
LIME1-202ENST00000444951 SYN2Q92777 582 aaPredicted RBP18.21■□□□□ 0.51
LIME1-202ENST00000444951 DNAJC7Q99615 494 aa18.21■□□□□ 0.51
LIME1-202ENST00000444951 CRISPLD1Q9H336 500 aa18.21■□□□□ 0.51
LIME1-202ENST00000444951 HAUS4Q9H6D7 363 aa18.21■□□□□ 0.51
LIME1-202ENST00000444951 NOCTQ9UK39 431 aaKnown RBP18.21■□□□□ 0.51
LIME1-202ENST00000444951 WDR3Q9UNX4 943 aaKnown RBP eCLIP18.21■□□□□ 0.51
LIME1-202ENST00000444951 DOCK6Q96HP0 2047 aa18.2■□□□□ 0.5
LIME1-202ENST00000444951 CFAP54Q96N23 3096 aa18.2■□□□□ 0.5
LIME1-202ENST00000444951 MTCL1Q9Y4B5 1905 aaKnown RBP18.2■□□□□ 0.5
LIME1-202ENST00000444951 RFPL2O75678 378 aa18.2■□□□□ 0.5
LIME1-202ENST00000444951 SERPING1P05155 500 aa18.2■□□□□ 0.5
LIME1-202ENST00000444951 PLEKP08567 350 aaPredicted RBP18.2■□□□□ 0.5
LIME1-202ENST00000444951 ATF2P15336 505 aa18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms