RNA–Protein interactions for RNA: ENST00000444058.1

ATPAF2-201, Transcript of ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

TSL 3

Gene ATPAF2, Length 685 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2-201ENST00000444058 ANKRD40Q6AI12 368 aa20.02■□□□□ 0.8
ATPAF2-201ENST00000444058 FOXR2Q6PJQ5 311 aa20.02■□□□□ 0.8
ATPAF2-201ENST00000444058 SCARA5Q6ZMJ2 495 aa20.02■□□□□ 0.8
ATPAF2-201ENST00000444058 ERCC4Q92889 916 aaPredicted RBP20.02■□□□□ 0.8
ATPAF2-201ENST00000444058 SMARCD1Q96GM5 515 aa20.02■□□□□ 0.8
ATPAF2-201ENST00000444058 NIF3L1Q9GZT8 377 aa20.02■□□□□ 0.8
ATPAF2-201ENST00000444058 SMG9Q9H0W8 520 aaKnown RBP20.02■□□□□ 0.8
ATPAF2-201ENST00000444058 FAM124BQ9H5Z6 455 aaPredicted RBP20.02■□□□□ 0.8
ATPAF2-201ENST00000444058 FAM86C1Q9NVL1 165 aa20.02■□□□□ 0.8
ATPAF2-201ENST00000444058 TRPM5Q9NZQ8 1165 aa20.02■□□□□ 0.8
ATPAF2-201ENST00000444058 GCNT4Q9P109 453 aa20.02■□□□□ 0.8
ATPAF2-201ENST00000444058 CCL26Q9Y258 94 aa20.02■□□□□ 0.8
ATPAF2-201ENST00000444058 COL4A3Q01955 1670 aa20.01■□□□□ 0.79
ATPAF2-201ENST00000444058 TCF3P15923 654 aa20.01■□□□□ 0.79
ATPAF2-201ENST00000444058 KPNA1P52294 538 aaPredicted RBP20.01■□□□□ 0.79
ATPAF2-201ENST00000444058 NDST1P52848 882 aa20.01■□□□□ 0.79
ATPAF2-201ENST00000444058 CACNA2D1P54289 1103 aa20.01■□□□□ 0.79
ATPAF2-201ENST00000444058 USP46P62068 366 aa20.01■□□□□ 0.79
ATPAF2-201ENST00000444058 SPOPLQ6IQ16 392 aa20.01■□□□□ 0.79
ATPAF2-201ENST00000444058 PAQR9Q6ZVX9 377 aa20.01■□□□□ 0.79
ATPAF2-201ENST00000444058 ACOT1Q86TX2 421 aa20.01■□□□□ 0.79
ATPAF2-201ENST00000444058 FUKQ8N0W3 1084 aa20.01■□□□□ 0.79
ATPAF2-201ENST00000444058 NUP93Q8N1F7 819 aa20.01■□□□□ 0.79
ATPAF2-201ENST00000444058 TTC39CQ8N584 583 aa20.01■□□□□ 0.79
ATPAF2-201ENST00000444058 FBXL13Q8NEE6 735 aa20.01■□□□□ 0.79
ATPAF2-201ENST00000444058 EEF2KMTQ96G04 330 aa20.01■□□□□ 0.79
ATPAF2-201ENST00000444058 DNAI2Q9GZS0 605 aa20.01■□□□□ 0.79
ATPAF2-201ENST00000444058 TMEM30AQ9NV96 361 aa20.01■□□□□ 0.79
ATPAF2-201ENST00000444058 COMMD8Q9NX08 183 aa20.01■□□□□ 0.79
ATPAF2-201ENST00000444058 GTSE1Q9NYZ3 720 aa20.01■□□□□ 0.79
ATPAF2-201ENST00000444058 CHMP5Q9NZZ3 219 aa20.01■□□□□ 0.79
ATPAF2-201ENST00000444058 FBXO4Q9UKT5 387 aa20.01■□□□□ 0.79
ATPAF2-201ENST00000444058 MIA3Q5JRA6 1907 aa20■□□□□ 0.79
ATPAF2-201ENST00000444058 ZNF840PA6NDX5 716 aa20■□□□□ 0.79
ATPAF2-201ENST00000444058 CLDN5O00501 218 aa20■□□□□ 0.79
ATPAF2-201ENST00000444058 GADD45BO75293 160 aaPredicted RBP20■□□□□ 0.79
ATPAF2-201ENST00000444058 RTN3O95197 1032 aaPredicted RBP20■□□□□ 0.79
ATPAF2-201ENST00000444058 CKMP06732 381 aa20■□□□□ 0.79
ATPAF2-201ENST00000444058 HDCP19113 662 aa20■□□□□ 0.79
ATPAF2-201ENST00000444058 CCNE1P24864 410 aa20■□□□□ 0.79
ATPAF2-201ENST00000444058 MXI1P50539 228 aa20■□□□□ 0.79
ATPAF2-201ENST00000444058 PMS1P54277 932 aaKnown RBP20■□□□□ 0.79
ATPAF2-201ENST00000444058 ITPRIPL2Q3MIP1 535 aa20■□□□□ 0.79
ATPAF2-201ENST00000444058 ZNF528Q3MIS6 628 aa20■□□□□ 0.79
ATPAF2-201ENST00000444058 CC2D1AQ6P1N0 951 aaPredicted RBP20■□□□□ 0.79
ATPAF2-201ENST00000444058 FAM35AQ86V20 835 aa20■□□□□ 0.79
ATPAF2-201ENST00000444058 KIAA1958Q8N8K9 716 aa20■□□□□ 0.79
ATPAF2-201ENST00000444058 OVCA2Q8WZ82 227 aa20■□□□□ 0.79
ATPAF2-201ENST00000444058 ELMO3Q96BJ8 720 aa20■□□□□ 0.79
ATPAF2-201ENST00000444058 ZFYVE19Q96K21 471 aa20■□□□□ 0.79
ATPAF2-201ENST00000444058 SLITRK1Q96PX8 696 aa20■□□□□ 0.79
ATPAF2-201ENST00000444058 APOBEC3GQ9HC16 384 aaKnown RBP20■□□□□ 0.79
ATPAF2-201ENST00000444058 TRPC7Q9HCX4 862 aa20■□□□□ 0.79
ATPAF2-201ENST00000444058 DMAP1Q9NPF5 467 aaPredicted RBP20■□□□□ 0.79
ATPAF2-201ENST00000444058 GKN1Q9NS71 199 aa20■□□□□ 0.79
ATPAF2-201ENST00000444058 IL37Q9NZH6 218 aa20■□□□□ 0.79
ATPAF2-201ENST00000444058 MAN1B1Q9UKM7 699 aa20■□□□□ 0.79
ATPAF2-201ENST00000444058 ARHGAP26Q9UNA1 814 aa20■□□□□ 0.79
ATPAF2-201ENST00000444058 OBSL1O75147 1896 aa20■□□□□ 0.79
ATPAF2-201ENST00000444058 GREB1Q4ZG55 1949 aa20■□□□□ 0.79
ATPAF2-201ENST00000444058 TICRRQ7Z2Z1 1910 aa20■□□□□ 0.79
ATPAF2-201ENST00000444058 SPECC1L-ADORA2AF8WAN1 911 aa19.99■□□□□ 0.79
ATPAF2-201ENST00000444058 CTHP32929 405 aa19.99■□□□□ 0.79
ATPAF2-201ENST00000444058 PDGFRLQ15198 375 aa19.99■□□□□ 0.79
ATPAF2-201ENST00000444058 PDZD8Q8NEN9 1154 aa19.99■□□□□ 0.79
ATPAF2-201ENST00000444058 SLC22A12Q96S37 553 aa19.99■□□□□ 0.79
ATPAF2-201ENST00000444058 CYP2S1Q96SQ9 504 aa19.99■□□□□ 0.79
ATPAF2-201ENST00000444058 KCNK16Q96T55 309 aa19.99■□□□□ 0.79
ATPAF2-201ENST00000444058 MED10Q9BTT4 135 aa19.99■□□□□ 0.79
ATPAF2-201ENST00000444058 NT5C1AQ9BXI3 368 aa19.99■□□□□ 0.79
ATPAF2-201ENST00000444058 CHRDQ9H2X0 955 aa19.99■□□□□ 0.79
ATPAF2-201ENST00000444058 SEMA4AQ9H3S1 761 aa19.99■□□□□ 0.79
ATPAF2-201ENST00000444058 MMRN2Q9H8L6 949 aa19.99■□□□□ 0.79
ATPAF2-201ENST00000444058 METTL14Q9HCE5 456 aaKnown RBP19.99■□□□□ 0.79
ATPAF2-201ENST00000444058 CSNK1G1Q9HCP0 422 aa19.99■□□□□ 0.79
ATPAF2-201ENST00000444058 SPATA6Q9NWH7 488 aaPredicted RBP19.99■□□□□ 0.79
ATPAF2-201ENST00000444058 RAB20Q9NX57 234 aa19.99■□□□□ 0.79
ATPAF2-201ENST00000444058 ARMCX3Q9UH62 379 aaPredicted RBP19.99■□□□□ 0.79
ATPAF2-201ENST00000444058 NDRG2Q9UN36 371 aaKnown RBP19.99■□□□□ 0.79
ATPAF2-201ENST00000444058 COQ4Q9Y3A0 265 aa19.99■□□□□ 0.79
ATPAF2-201ENST00000444058 FAM92AA1XBS5 289 aa19.98■□□□□ 0.79
ATPAF2-201ENST00000444058 C2orf78A6NCI8 922 aa19.98■□□□□ 0.79
ATPAF2-201ENST00000444058 LAMTOR5O43504 91 aa19.98■□□□□ 0.79
ATPAF2-201ENST00000444058 CILPO75339 1184 aa19.98■□□□□ 0.79
ATPAF2-201ENST00000444058 OLFM2O95897 454 aa19.98■□□□□ 0.79
ATPAF2-201ENST00000444058 YWHAQP27348 245 aa19.98■□□□□ 0.79
ATPAF2-201ENST00000444058 UBE2HP62256 183 aa19.98■□□□□ 0.79
ATPAF2-201ENST00000444058 AMPD2Q01433 879 aa19.98■□□□□ 0.79
ATPAF2-201ENST00000444058 TAF10Q12962 218 aa19.98■□□□□ 0.79
ATPAF2-201ENST00000444058 MORC3Q14149 939 aa19.98■□□□□ 0.79
ATPAF2-201ENST00000444058 ZNF77Q15935 545 aa19.98■□□□□ 0.79
ATPAF2-201ENST00000444058 MAML2Q8IZL2 1156 aaPredicted RBP19.98■□□□□ 0.79
ATPAF2-201ENST00000444058 ARL14EPQ8N8R7 260 aaPredicted RBP19.98■□□□□ 0.79
ATPAF2-201ENST00000444058 CEP63Q96MT8 703 aa19.98■□□□□ 0.79
ATPAF2-201ENST00000444058 HNRNPABQ99729 332 aaKnown RBP19.98■□□□□ 0.79
ATPAF2-201ENST00000444058 HMGXB4Q9UGU5 601 aa19.98■□□□□ 0.79
ATPAF2-201ENST00000444058 KIF26AQ9ULI4 1882 aaPredicted RBP19.97■□□□□ 0.79
ATPAF2-201ENST00000444058 TRIM49BA6NDI0 452 aa19.97■□□□□ 0.79
ATPAF2-201ENST00000444058 TNFRSF10BO14763 440 aa19.97■□□□□ 0.79
ATPAF2-201ENST00000444058 SP9P0CG40 484 aa19.97■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms