RNA–Protein interactions for RNA: ENST00000443046.5

HMGN1-208, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-208ENST00000443046 STRA6Q9BX79 667 aa15.45■□□□□ 0.06
HMGN1-208ENST00000443046 IKZF4Q9H2S9 585 aa15.45■□□□□ 0.06
HMGN1-208ENST00000443046 GDAP2Q9NXN4 497 aa15.45■□□□□ 0.06
HMGN1-208ENST00000443046 PCDH15Q96QU1 1955 aa15.45■□□□□ 0.06
HMGN1-208ENST00000443046 ADAMTS20P59510 1910 aa15.45■□□□□ 0.06
HMGN1-208ENST00000443046 CEP192Q8TEP8 1941 aa15.45■□□□□ 0.06
HMGN1-208ENST00000443046 ADAMTS9Q9P2N4 1935 aa15.45■□□□□ 0.06
HMGN1-208ENST00000443046 H0Y626 953 aa15.44■□□□□ 0.06
HMGN1-208ENST00000443046 SGK1O00141 431 aa15.44■□□□□ 0.06
HMGN1-208ENST00000443046 HUS1O60921 280 aa15.44■□□□□ 0.06
HMGN1-208ENST00000443046 ALDH1A2O94788 518 aa15.44■□□□□ 0.06
HMGN1-208ENST00000443046 TRIM16O95361 564 aa15.44■□□□□ 0.06
HMGN1-208ENST00000443046 CYP17A1P05093 508 aa15.44■□□□□ 0.06
HMGN1-208ENST00000443046 HOXD12P35452 270 aa15.44■□□□□ 0.06
HMGN1-208ENST00000443046 EIF2DP41214 584 aaKnown RBP15.44■□□□□ 0.06
HMGN1-208ENST00000443046 DPP6P42658 865 aa15.44■□□□□ 0.06
HMGN1-208ENST00000443046 KIR2DL1P43626 348 aaPredicted RBP15.44■□□□□ 0.06
HMGN1-208ENST00000443046 SLC6A11P48066 632 aa15.44■□□□□ 0.06
HMGN1-208ENST00000443046 MYL7Q01449 175 aa15.44■□□□□ 0.06
HMGN1-208ENST00000443046 KCNB1Q14721 858 aa15.44■□□□□ 0.06
HMGN1-208ENST00000443046 LIMS2Q7Z4I7 341 aa15.44■□□□□ 0.06
HMGN1-208ENST00000443046 ALLCQ8N6M5 410 aa15.44■□□□□ 0.06
HMGN1-208ENST00000443046 LRRC52Q8N7C0 313 aa15.44■□□□□ 0.06
HMGN1-208ENST00000443046 TXNDC5Q8NBS9 432 aaKnown RBP15.44■□□□□ 0.06
HMGN1-208ENST00000443046 WHAMMQ8TF30 809 aa15.44■□□□□ 0.06
HMGN1-208ENST00000443046 SPATA17Q96L03 361 aa15.44■□□□□ 0.06
HMGN1-208ENST00000443046 CEP295NLQ96MC4 621 aa15.44■□□□□ 0.06
HMGN1-208ENST00000443046 LEFTY2O00292 366 aa15.43■□□□□ 0.06
HMGN1-208ENST00000443046 ADAM23O75077 832 aa15.43■□□□□ 0.06
HMGN1-208ENST00000443046 PPP1R37O75864 691 aa15.43■□□□□ 0.06
HMGN1-208ENST00000443046 OLFM2O95897 454 aa15.43■□□□□ 0.06
HMGN1-208ENST00000443046 POLR2BP30876 1174 aaKnown RBP15.43■□□□□ 0.06
HMGN1-208ENST00000443046 MAPK8P45983 427 aa15.43■□□□□ 0.06
HMGN1-208ENST00000443046 PDE6CP51160 858 aa15.43■□□□□ 0.06
HMGN1-208ENST00000443046 SIM1P81133 766 aaPredicted RBP15.43■□□□□ 0.06
HMGN1-208ENST00000443046 SLC7A9P82251 487 aa15.43■□□□□ 0.06
HMGN1-208ENST00000443046 MCM6Q14566 821 aa15.43■□□□□ 0.06
HMGN1-208ENST00000443046 ZNF720Q7Z2F6 126 aa15.43■□□□□ 0.06
HMGN1-208ENST00000443046 PROSER1Q86XN7 944 aa15.43■□□□□ 0.06
HMGN1-208ENST00000443046 TOP6BLQ8N6T0 577 aa15.43■□□□□ 0.06
HMGN1-208ENST00000443046 TTC16Q8NEE8 873 aa15.43■□□□□ 0.06
HMGN1-208ENST00000443046 RAD54LQ92698 747 aa15.43■□□□□ 0.06
HMGN1-208ENST00000443046 SPACA7Q96KW9 195 aa15.43■□□□□ 0.06
HMGN1-208ENST00000443046 CAPN10Q9HC96 672 aa15.43■□□□□ 0.06
HMGN1-208ENST00000443046 AGAP1Q9UPQ3 857 aa15.43■□□□□ 0.06
HMGN1-208ENST00000443046 MAP3K13O43283 966 aa15.42■□□□□ 0.06
HMGN1-208ENST00000443046 HCRTO43612 131 aa15.42■□□□□ 0.06
HMGN1-208ENST00000443046 KAT7O95251 611 aa15.42■□□□□ 0.06
HMGN1-208ENST00000443046 KLF8O95600 359 aaPredicted RBP15.42■□□□□ 0.06
HMGN1-208ENST00000443046 ITGB3P05106 788 aa15.42■□□□□ 0.06
HMGN1-208ENST00000443046 ITPKAP23677 461 aa15.42■□□□□ 0.06
HMGN1-208ENST00000443046 LHX1P48742 406 aa15.42■□□□□ 0.06
HMGN1-208ENST00000443046 USP46P62068 366 aa15.42■□□□□ 0.06
HMGN1-208ENST00000443046 FAM193AP78312 1265 aa15.42■□□□□ 0.06
HMGN1-208ENST00000443046 DHX8Q14562 1220 aaKnown RBP15.42■□□□□ 0.06
HMGN1-208ENST00000443046 POSTNQ15063 836 aa15.42■□□□□ 0.06
HMGN1-208ENST00000443046 DHCR24Q15392 516 aa15.42■□□□□ 0.06
HMGN1-208ENST00000443046 SOWAHAQ2M3V2 549 aa15.42■□□□□ 0.06
HMGN1-208ENST00000443046 EMC10Q5UCC4 262 aa15.42■□□□□ 0.06
HMGN1-208ENST00000443046 LYSMD4Q5XG99 296 aa15.42■□□□□ 0.06
HMGN1-208ENST00000443046 LMBRD2Q68DH5 695 aaPredicted RBP15.42■□□□□ 0.06
HMGN1-208ENST00000443046 RHBDF2Q6PJF5 856 aa15.42■□□□□ 0.06
HMGN1-208ENST00000443046 RAB44Q7Z6P3 723 aaPredicted RBP15.42■□□□□ 0.06
HMGN1-208ENST00000443046 FILIP1Q7Z7B0 1213 aa15.42■□□□□ 0.06
HMGN1-208ENST00000443046 SPATA2LQ8IUW3 424 aaPredicted RBP15.42■□□□□ 0.06
HMGN1-208ENST00000443046 SCN4BQ8IWT1 228 aa15.42■□□□□ 0.06
HMGN1-208ENST00000443046 PHTF2Q8N3S3 785 aa15.42■□□□□ 0.06
HMGN1-208ENST00000443046 ZSWIM2Q8NEG5 633 aa15.42■□□□□ 0.06
HMGN1-208ENST00000443046 POMGNT1Q8WZA1 660 aa15.42■□□□□ 0.06
HMGN1-208ENST00000443046 PNKPQ96T60 521 aa15.42■□□□□ 0.06
HMGN1-208ENST00000443046 TTLL2Q9BWV7 592 aa15.42■□□□□ 0.06
HMGN1-208ENST00000443046 RNF38Q9H0F5 515 aa15.42■□□□□ 0.06
HMGN1-208ENST00000443046 POLMQ9NP87 494 aaPredicted RBP15.42■□□□□ 0.06
HMGN1-208ENST00000443046 SLC6A14Q9UN76 642 aa15.42■□□□□ 0.06
HMGN1-208ENST00000443046 KALRNO60229 2985 aa15.42■□□□□ 0.06
HMGN1-208ENST00000443046 ZNF840PA6NDX5 716 aa15.41■□□□□ 0.06
HMGN1-208ENST00000443046 MYMKA6NI61 221 aa15.41■□□□□ 0.06
HMGN1-208ENST00000443046 TBCAO75347 108 aaKnown RBP15.41■□□□□ 0.06
HMGN1-208ENST00000443046 SEC24BO95487 1268 aa15.41■□□□□ 0.06
HMGN1-208ENST00000443046 SERPINF2P08697 491 aa15.41■□□□□ 0.06
HMGN1-208ENST00000443046 PLCG1P19174 1290 aa15.41■□□□□ 0.06
HMGN1-208ENST00000443046 PCSK1P29120 753 aa15.41■□□□□ 0.06
HMGN1-208ENST00000443046 TIE1P35590 1138 aa15.41■□□□□ 0.06
HMGN1-208ENST00000443046 TNFRSF4P43489 277 aa15.41■□□□□ 0.06
HMGN1-208ENST00000443046 TFAMQ00059 246 aaKnown RBP15.41■□□□□ 0.06
HMGN1-208ENST00000443046 BYSLQ13895 437 aaKnown RBP15.41■□□□□ 0.06
HMGN1-208ENST00000443046 DUOXA1Q1HG43 343 aa15.41■□□□□ 0.06
HMGN1-208ENST00000443046 VSTM1Q6UX27 236 aa15.41■□□□□ 0.06
HMGN1-208ENST00000443046 ARMCX6Q7L4S7 300 aa15.41■□□□□ 0.06
HMGN1-208ENST00000443046 C12orf40Q86WS4 652 aa15.41■□□□□ 0.06
HMGN1-208ENST00000443046 BRSK2Q8IWQ3 736 aa15.41■□□□□ 0.06
HMGN1-208ENST00000443046 CEP76Q8TAP6 659 aa15.41■□□□□ 0.06
HMGN1-208ENST00000443046 CACTINQ8WUQ7 758 aaKnown RBP15.41■□□□□ 0.06
HMGN1-208ENST00000443046 HVCN1Q96D96 273 aa15.41■□□□□ 0.06
HMGN1-208ENST00000443046 CALML4Q96GE6 196 aa15.41■□□□□ 0.06
HMGN1-208ENST00000443046 SIX4Q9UIU6 781 aa15.41■□□□□ 0.06
HMGN1-208ENST00000443046 ITGA11Q9UKX5 1188 aa15.41■□□□□ 0.06
HMGN1-208ENST00000443046 GPSM3Q9Y4H4 160 aa15.41■□□□□ 0.06
HMGN1-208ENST00000443046 HELZ2Q9BYK8 2649 aaKnown RBP15.41■□□□□ 0.06
HMGN1-208ENST00000443046 ATP2C2O75185 946 aa15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms