RNA–Protein interactions for RNA: ENST00000442830.5

PTPRE-203, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 5

Gene PTPRE, Length 779 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-203ENST00000442830 ATICP31939 592 aa14.73□□□□□ -0.05
PTPRE-203ENST00000442830 MPLP40238 635 aa14.73□□□□□ -0.05
PTPRE-203ENST00000442830 EIF2DP41214 584 aaKnown RBP14.73□□□□□ -0.05
PTPRE-203ENST00000442830 CDR1P51861 262 aa14.73□□□□□ -0.05
PTPRE-203ENST00000442830 ASIC1P78348 528 aa14.73□□□□□ -0.05
PTPRE-203ENST00000442830 SLC7A9P82251 487 aa14.73□□□□□ -0.05
PTPRE-203ENST00000442830 CYP27A1Q02318 531 aa14.73□□□□□ -0.05
PTPRE-203ENST00000442830 PSMD6Q15008 389 aa14.73□□□□□ -0.05
PTPRE-203ENST00000442830 SNRNP35Q16560 246 aaKnown RBP14.73□□□□□ -0.05
PTPRE-203ENST00000442830 PLK5Q496M5 336 aa14.73□□□□□ -0.05
PTPRE-203ENST00000442830 USP39Q53GS9 565 aaKnown RBP14.73□□□□□ -0.05
PTPRE-203ENST00000442830 FAM26FQ5R3K3 315 aa14.73□□□□□ -0.05
PTPRE-203ENST00000442830 TDRD10Q5VZ19 366 aaKnown RBP14.73□□□□□ -0.05
PTPRE-203ENST00000442830 PKN3Q6P5Z2 889 aa14.73□□□□□ -0.05
PTPRE-203ENST00000442830 TRAPPC11Q7Z392 1133 aa14.73□□□□□ -0.05
PTPRE-203ENST00000442830 KBTBD6Q86V97 674 aa14.73□□□□□ -0.05
PTPRE-203ENST00000442830 PDILTQ8N807 584 aa14.73□□□□□ -0.05
PTPRE-203ENST00000442830 LINC00301Q8NCQ3 95 aa14.73□□□□□ -0.05
PTPRE-203ENST00000442830 STKLD1Q8NE28 680 aa14.73□□□□□ -0.05
PTPRE-203ENST00000442830 ZSWIM2Q8NEG5 633 aa14.73□□□□□ -0.05
PTPRE-203ENST00000442830 PDZD8Q8NEN9 1154 aa14.73□□□□□ -0.05
PTPRE-203ENST00000442830 ZNF507Q8TCN5 953 aa14.73□□□□□ -0.05
PTPRE-203ENST00000442830 KBTBD7Q8WVZ9 684 aa14.73□□□□□ -0.05
PTPRE-203ENST00000442830 OVCA2Q8WZ82 227 aa14.73□□□□□ -0.05
PTPRE-203ENST00000442830 SYAP1Q96A49 352 aaPredicted RBP14.73□□□□□ -0.05
PTPRE-203ENST00000442830 CHFRQ96EP1 664 aa14.73□□□□□ -0.05
PTPRE-203ENST00000442830 CGRRF1Q99675 332 aa14.73□□□□□ -0.05
PTPRE-203ENST00000442830 TRIM9Q9C026 710 aa14.73□□□□□ -0.05
PTPRE-203ENST00000442830 MTMR6Q9Y217 621 aa14.73□□□□□ -0.05
PTPRE-203ENST00000442830 WNT6Q9Y6F9 365 aa14.73□□□□□ -0.05
PTPRE-203ENST00000442830 PALM2-AKAP2B1ALY0 433 aaPredicted RBP14.72□□□□□ -0.05
PTPRE-203ENST00000442830 ALDH1A2O94788 518 aa14.72□□□□□ -0.05
PTPRE-203ENST00000442830 RTN3O95197 1032 aaPredicted RBP14.72□□□□□ -0.05
PTPRE-203ENST00000442830 GNL1P36915 607 aaPredicted RBP14.72□□□□□ -0.05
PTPRE-203ENST00000442830 DPP6P42658 865 aa14.72□□□□□ -0.05
PTPRE-203ENST00000442830 AP3M2P53677 418 aa14.72□□□□□ -0.05
PTPRE-203ENST00000442830 MRPS21P82921 87 aaKnown RBP14.72□□□□□ -0.05
PTPRE-203ENST00000442830 PSMD2Q13200 908 aa14.72□□□□□ -0.05
PTPRE-203ENST00000442830 LMBRD2Q68DH5 695 aaPredicted RBP14.72□□□□□ -0.05
PTPRE-203ENST00000442830 CBWD2Q8IUF1 395 aa14.72□□□□□ -0.05
PTPRE-203ENST00000442830 XXYLT1Q8NBI6 393 aa14.72□□□□□ -0.05
PTPRE-203ENST00000442830 TSTD1Q8NFU3 115 aa14.72□□□□□ -0.05
PTPRE-203ENST00000442830 OR5B17Q8NGF7 314 aa14.72□□□□□ -0.05
PTPRE-203ENST00000442830 RIN3Q8TB24 985 aa14.72□□□□□ -0.05
PTPRE-203ENST00000442830 GOLGA5Q8TBA6 731 aa14.72□□□□□ -0.05
PTPRE-203ENST00000442830 OTUB2Q96DC9 234 aa14.72□□□□□ -0.05
PTPRE-203ENST00000442830 PCED1BQ96HM7 432 aa14.72□□□□□ -0.05
PTPRE-203ENST00000442830 HHIPQ96QV1 700 aa14.72□□□□□ -0.05
PTPRE-203ENST00000442830 CYP2S1Q96SQ9 504 aa14.72□□□□□ -0.05
PTPRE-203ENST00000442830 TBC1D14Q9P2M4 693 aa14.72□□□□□ -0.05
PTPRE-203ENST00000442830 THADAQ6YHU6 1953 aa14.72□□□□□ -0.05
PTPRE-203ENST00000442830 MAP1BP46821 2468 aaKnown RBP14.71□□□□□ -0.05
PTPRE-203ENST00000442830 MYH10P35580 1976 aa14.71□□□□□ -0.05
PTPRE-203ENST00000442830 A0A087X0B3 334 aa14.71□□□□□ -0.05
PTPRE-203ENST00000442830 C2orf78A6NCI8 922 aa14.71□□□□□ -0.05
PTPRE-203ENST00000442830 LEFTY2O00292 366 aa14.71□□□□□ -0.05
PTPRE-203ENST00000442830 GDF9O60383 454 aa14.71□□□□□ -0.05
PTPRE-203ENST00000442830 CUTAO60888 179 aa14.71□□□□□ -0.05
PTPRE-203ENST00000442830 ADH1CP00326 375 aa14.71□□□□□ -0.05
PTPRE-203ENST00000442830 DLATP10515 647 aaKnown RBP14.71□□□□□ -0.05
PTPRE-203ENST00000442830 TRIM21P19474 475 aaKnown RBP14.71□□□□□ -0.05
PTPRE-203ENST00000442830 PXNP49023 591 aaPredicted RBP14.71□□□□□ -0.05
PTPRE-203ENST00000442830 DGKEP52429 567 aa14.71□□□□□ -0.05
PTPRE-203ENST00000442830 PSMC1P62191 440 aaKnown RBP14.71□□□□□ -0.05
PTPRE-203ENST00000442830 TRPC3Q13507 836 aa14.71□□□□□ -0.05
PTPRE-203ENST00000442830 BYSLQ13895 437 aaKnown RBP14.71□□□□□ -0.05
PTPRE-203ENST00000442830 STPG1Q5TH74 334 aa14.71□□□□□ -0.05
PTPRE-203ENST00000442830 FAM173BQ6P4H8 233 aa14.71□□□□□ -0.05
PTPRE-203ENST00000442830 NUDT18Q6ZVK8 323 aa14.71□□□□□ -0.05
PTPRE-203ENST00000442830 EPM2AIP1Q7L775 607 aaPredicted RBP14.71□□□□□ -0.05
PTPRE-203ENST00000442830 C12orf56Q8IXR9 622 aa14.71□□□□□ -0.05
PTPRE-203ENST00000442830 TTC16Q8NEE8 873 aa14.71□□□□□ -0.05
PTPRE-203ENST00000442830 OR6B3Q8NGW1 331 aa14.71□□□□□ -0.05
PTPRE-203ENST00000442830 SLC22A12Q96S37 553 aa14.71□□□□□ -0.05
PTPRE-203ENST00000442830 C7orf25Q9BPX7 421 aa14.71□□□□□ -0.05
PTPRE-203ENST00000442830 FGFBP2Q9BYJ0 223 aa14.71□□□□□ -0.05
PTPRE-203ENST00000442830 PANK2Q9BZ23 570 aa14.71□□□□□ -0.05
PTPRE-203ENST00000442830 CRTAC1Q9NQ79 661 aa14.71□□□□□ -0.05
PTPRE-203ENST00000442830 AGPAT3Q9NRZ7 376 aa14.71□□□□□ -0.05
PTPRE-203ENST00000442830 ANGPTL2Q9UKU9 493 aa14.71□□□□□ -0.05
PTPRE-203ENST00000442830 MMP17Q9ULZ9 603 aa14.71□□□□□ -0.05
PTPRE-203ENST00000442830 CHD8Q9HCK8 2581 aa14.71□□□□□ -0.06
PTPRE-203ENST00000442830 PLXND1Q9Y4D7 1925 aa14.7□□□□□ -0.06
PTPRE-203ENST00000442830 PTPRJQ12913 1337 aa14.7□□□□□ -0.06
PTPRE-203ENST00000442830 KMT2BQ9UMN6 2715 aaPredicted RBP14.7□□□□□ -0.06
PTPRE-203ENST00000442830 PVALEFA0A1B0GWK0 134 aa14.7□□□□□ -0.06
PTPRE-203ENST00000442830 ZNF840PA6NDX5 716 aa14.7□□□□□ -0.06
PTPRE-203ENST00000442830 K7ELQ4 463 aaPredicted RBP14.7□□□□□ -0.06
PTPRE-203ENST00000442830 ATP2C2O75185 946 aa14.7□□□□□ -0.06
PTPRE-203ENST00000442830 OLFM2O95897 454 aa14.7□□□□□ -0.06
PTPRE-203ENST00000442830 PDGFRBP09619 1106 aa14.7□□□□□ -0.06
PTPRE-203ENST00000442830 LMO2P25791 158 aa14.7□□□□□ -0.06
PTPRE-203ENST00000442830 CYP24A1Q07973 514 aa14.7□□□□□ -0.06
PTPRE-203ENST00000442830 SF3A2Q15428 464 aaKnown RBP14.7□□□□□ -0.06
PTPRE-203ENST00000442830 E2F4Q16254 413 aa14.7□□□□□ -0.06
PTPRE-203ENST00000442830 WDR72Q3MJ13 1102 aa14.7□□□□□ -0.06
PTPRE-203ENST00000442830 MDH1BQ5I0G3 518 aa14.7□□□□□ -0.06
PTPRE-203ENST00000442830 RNF43Q68DV7 783 aa14.7□□□□□ -0.06
PTPRE-203ENST00000442830 UNC13DQ70J99 1090 aa14.7□□□□□ -0.06
PTPRE-203ENST00000442830 USP33Q8TEY7 942 aa14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms