RNA–Protein interactions for RNA: ENST00000442054.5

CDC42BPA-208, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best)

Gene CDC42BPA, Length 3,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-208ENST00000442054 DNAJC21Q5F1R6 531 aaKnown RBP7.79□□□□□ -1.16
CDC42BPA-208ENST00000442054 NAA35Q5VZE5 725 aa7.79□□□□□ -1.16
CDC42BPA-208ENST00000442054 JADE1Q6IE81 842 aa7.79□□□□□ -1.16
CDC42BPA-208ENST00000442054 C8orf74Q6P047 294 aa7.79□□□□□ -1.16
CDC42BPA-208ENST00000442054 ZDHHC24Q6UX98 284 aa7.79□□□□□ -1.16
CDC42BPA-208ENST00000442054 NUDT18Q6ZVK8 323 aa7.79□□□□□ -1.16
CDC42BPA-208ENST00000442054 TMC3Q7Z5M5 1100 aa7.79□□□□□ -1.16
CDC42BPA-208ENST00000442054 IFT20Q8IY31 132 aa7.79□□□□□ -1.16
CDC42BPA-208ENST00000442054 ADAMTS19Q8TE59 1207 aa7.79□□□□□ -1.16
CDC42BPA-208ENST00000442054 ING5Q8WYH8 240 aa7.79□□□□□ -1.16
CDC42BPA-208ENST00000442054 C18orf25Q96B23 403 aaPredicted RBP7.79□□□□□ -1.16
CDC42BPA-208ENST00000442054 NT5C1BQ96P26 610 aa7.79□□□□□ -1.16
CDC42BPA-208ENST00000442054 MTMR12Q9C0I1 747 aa7.79□□□□□ -1.16
CDC42BPA-208ENST00000442054 PLEKHA5Q9HAU0 1116 aa7.79□□□□□ -1.16
CDC42BPA-208ENST00000442054 HCN4Q9Y3Q4 1203 aa7.79□□□□□ -1.16
CDC42BPA-208ENST00000442054 PCDHB5Q9Y5E4 795 aa7.79□□□□□ -1.16
CDC42BPA-208ENST00000442054 AKR1B10O60218 316 aa7.79□□□□□ -1.16
CDC42BPA-208ENST00000442054 ALADP13716 330 aa7.79□□□□□ -1.16
CDC42BPA-208ENST00000442054 ADORA2BP29275 332 aa7.79□□□□□ -1.16
CDC42BPA-208ENST00000442054 IRS1P35568 1242 aa7.79□□□□□ -1.16
CDC42BPA-208ENST00000442054 GNL1P36915 607 aaPredicted RBP7.79□□□□□ -1.16
CDC42BPA-208ENST00000442054 PTGIRP43119 386 aa7.79□□□□□ -1.16
CDC42BPA-208ENST00000442054 TNNT3P45378 269 aaPredicted RBP7.79□□□□□ -1.16
CDC42BPA-208ENST00000442054 MAPRE1Q15691 268 aaKnown RBP7.79□□□□□ -1.16
CDC42BPA-208ENST00000442054 HSP90B2PQ58FF3 399 aa7.79□□□□□ -1.16
CDC42BPA-208ENST00000442054 RTN4RL1Q86UN2 441 aaPredicted RBP7.79□□□□□ -1.16
CDC42BPA-208ENST00000442054 DAW1Q8N136 415 aa7.79□□□□□ -1.16
CDC42BPA-208ENST00000442054 ST13P5Q8NFI4 369 aaPredicted RBP7.79□□□□□ -1.16
CDC42BPA-208ENST00000442054 GIPC2Q8TF65 315 aa7.79□□□□□ -1.16
CDC42BPA-208ENST00000442054 PBKQ96KB5 322 aa7.79□□□□□ -1.16
CDC42BPA-208ENST00000442054 CRACR2AQ9BSW2 395 aa7.79□□□□□ -1.16
CDC42BPA-208ENST00000442054 TTYH1Q9H313 450 aaPredicted RBP7.79□□□□□ -1.16
CDC42BPA-208ENST00000442054 SLC27A5Q9Y2P5 690 aa7.79□□□□□ -1.16
CDC42BPA-208ENST00000442054 ZDBF2Q9HCK1 2354 aa7.78□□□□□ -1.16
CDC42BPA-208ENST00000442054 F8VZ95 297 aa7.78□□□□□ -1.16
CDC42BPA-208ENST00000442054 EIF3DO15371 548 aaKnown RBP eCLIP7.78□□□□□ -1.16
CDC42BPA-208ENST00000442054 RASSF9O75901 435 aa7.78□□□□□ -1.16
CDC42BPA-208ENST00000442054 NEBLO76041 1014 aa7.78□□□□□ -1.16
CDC42BPA-208ENST00000442054 GFPT2O94808 682 aa7.78□□□□□ -1.16
CDC42BPA-208ENST00000442054 GARTP22102 1010 aa7.78□□□□□ -1.16
CDC42BPA-208ENST00000442054 ACAT1P24752 427 aaKnown RBP7.78□□□□□ -1.16
CDC42BPA-208ENST00000442054 CCT5P48643 541 aa7.78□□□□□ -1.16
CDC42BPA-208ENST00000442054 ERVFC1P60507 584 aa7.78□□□□□ -1.16
CDC42BPA-208ENST00000442054 GUCY2DQ02846 1103 aa7.78□□□□□ -1.16
CDC42BPA-208ENST00000442054 PDCLQ13371 301 aa7.78□□□□□ -1.16
CDC42BPA-208ENST00000442054 CLLU1OSQ5K130 101 aa7.78□□□□□ -1.16
CDC42BPA-208ENST00000442054 DUPD1Q68J44 220 aa7.78□□□□□ -1.16
CDC42BPA-208ENST00000442054 GJB7Q6PEY0 223 aa7.78□□□□□ -1.16
CDC42BPA-208ENST00000442054 CBWD2Q8IUF1 395 aa7.78□□□□□ -1.16
CDC42BPA-208ENST00000442054 KRT12Q99456 494 aa7.78□□□□□ -1.16
CDC42BPA-208ENST00000442054 OSBPL7Q9BZF2 842 aa7.78□□□□□ -1.16
CDC42BPA-208ENST00000442054 PRDM6Q9NQX0 595 aa7.78□□□□□ -1.16
CDC42BPA-208ENST00000442054 THG1LQ9NWX6 298 aaKnown RBP7.78□□□□□ -1.16
CDC42BPA-208ENST00000442054 DDX43Q9NXZ2 648 aaKnown RBP7.78□□□□□ -1.16
CDC42BPA-208ENST00000442054 PCDHB4Q9Y5E5 795 aa7.78□□□□□ -1.16
CDC42BPA-208ENST00000442054 HCFC2Q9Y5Z7 792 aa7.78□□□□□ -1.16
CDC42BPA-208ENST00000442054 IGKV6-21A0A0C4DH24 114 aa7.78□□□□□ -1.16
CDC42BPA-208ENST00000442054 KPNA7A9QM74 516 aa7.78□□□□□ -1.16
CDC42BPA-208ENST00000442054 INPPL1O15357 1258 aa7.78□□□□□ -1.16
CDC42BPA-208ENST00000442054 MDH1P40925 334 aaKnown RBP7.78□□□□□ -1.16
CDC42BPA-208ENST00000442054 TNFSF9P41273 254 aa7.78□□□□□ -1.16
CDC42BPA-208ENST00000442054 VAMP7P51809 220 aa7.78□□□□□ -1.16
CDC42BPA-208ENST00000442054 AP3M2P53677 418 aa7.78□□□□□ -1.16
CDC42BPA-208ENST00000442054 GNGT1P63211 74 aa7.78□□□□□ -1.16
CDC42BPA-208ENST00000442054 MGAT3Q09327 533 aa7.78□□□□□ -1.16
CDC42BPA-208ENST00000442054 DUSP4Q13115 394 aa7.78□□□□□ -1.16
CDC42BPA-208ENST00000442054 NR1H3Q13133 447 aa7.78□□□□□ -1.16
CDC42BPA-208ENST00000442054 NCOA4Q13772 614 aa7.78□□□□□ -1.16
CDC42BPA-208ENST00000442054 PABPC1LQ4VXU2 614 aaKnown RBP7.78□□□□□ -1.16
CDC42BPA-208ENST00000442054 BTBD8Q5XKL5 378 aa7.78□□□□□ -1.16
CDC42BPA-208ENST00000442054 GPR153Q6NV75 609 aa7.78□□□□□ -1.16
CDC42BPA-208ENST00000442054 SLC39A11Q8N1S5 342 aa7.78□□□□□ -1.16
CDC42BPA-208ENST00000442054 MYCBPAPQ8TBZ2 947 aa7.78□□□□□ -1.16
CDC42BPA-208ENST00000442054 LIMD1Q9UGP4 676 aa7.78□□□□□ -1.16
CDC42BPA-208ENST00000442054 BZW2Q9Y6E2 419 aaKnown RBP7.78□□□□□ -1.16
CDC42BPA-208ENST00000442054 DDHD2O94830 711 aa7.77□□□□□ -1.16
CDC42BPA-208ENST00000442054 AFPP02771 609 aaKnown RBP7.77□□□□□ -1.16
CDC42BPA-208ENST00000442054 MAPTP10636 758 aaKnown RBP7.77□□□□□ -1.16
CDC42BPA-208ENST00000442054 PPM1FP49593 454 aaPredicted RBP7.77□□□□□ -1.16
CDC42BPA-208ENST00000442054 SNX16P57768 344 aa7.77□□□□□ -1.16
CDC42BPA-208ENST00000442054 ADAM17P78536 824 aa7.77□□□□□ -1.16
CDC42BPA-208ENST00000442054 GUCY1A3Q02108 690 aa7.77□□□□□ -1.16
CDC42BPA-208ENST00000442054 CUL1Q13616 776 aa7.77□□□□□ -1.16
CDC42BPA-208ENST00000442054 KCTD19Q17RG1 926 aaPredicted RBP7.77□□□□□ -1.16
CDC42BPA-208ENST00000442054 CBWD6Q4V339 395 aa7.77□□□□□ -1.16
CDC42BPA-208ENST00000442054 CBWD3Q5JTY5 395 aa7.77□□□□□ -1.16
CDC42BPA-208ENST00000442054 CBWD5Q5RIA9 395 aa7.77□□□□□ -1.16
CDC42BPA-208ENST00000442054 VARS2Q5ST30 1063 aaKnown RBP7.77□□□□□ -1.16
CDC42BPA-208ENST00000442054 SLC9A9Q8IVB4 645 aa7.77□□□□□ -1.16
CDC42BPA-208ENST00000442054 ADGRF2Q8IZF7 708 aa7.77□□□□□ -1.16
CDC42BPA-208ENST00000442054 SIX6OS1Q8N1H7 587 aa7.77□□□□□ -1.16
CDC42BPA-208ENST00000442054 MRPL43Q8N983 215 aaKnown RBP7.77□□□□□ -1.16
CDC42BPA-208ENST00000442054 C3orf20Q8ND61 904 aa7.77□□□□□ -1.16
CDC42BPA-208ENST00000442054 PI4K2AQ9BTU6 479 aa7.77□□□□□ -1.16
CDC42BPA-208ENST00000442054 GRHL1Q9NZI5 618 aa7.77□□□□□ -1.16
CDC42BPA-208ENST00000442054 PLXNB2O15031 1838 aa7.77□□□□□ -1.16
CDC42BPA-208ENST00000442054 A0A0G2JMZ2 1700 aa7.77□□□□□ -1.16
CDC42BPA-208ENST00000442054 LRRC37A2A6NM11 1700 aa7.77□□□□□ -1.16
CDC42BPA-208ENST00000442054 TYW5A2RUC4 315 aaKnown RBP7.77□□□□□ -1.17
CDC42BPA-208ENST00000442054 TISP43B9A030 160 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms