RNA–Protein interactions for RNA: ENST00000441703.5

HDAC6-210, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 599 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-210ENST00000441703 TCEAL8Q8IYN2 117 aa6.92□□□□□ -1.3
HDAC6-210ENST00000441703 RNF149Q8NC42 400 aa6.92□□□□□ -1.3
HDAC6-210ENST00000441703 OR2I1PQ8NGU4 316 aa6.92□□□□□ -1.3
HDAC6-210ENST00000441703 CCDC26Q8TAB7 109 aa6.92□□□□□ -1.3
HDAC6-210ENST00000441703 SHKBP1Q8TBC3 707 aa6.92□□□□□ -1.3
HDAC6-210ENST00000441703 SPIRE2Q8WWL2 714 aa6.92□□□□□ -1.3
HDAC6-210ENST00000441703 BAP1Q92560 729 aa6.92□□□□□ -1.3
HDAC6-210ENST00000441703 DDX27Q96GQ7 796 aaKnown RBP6.92□□□□□ -1.3
HDAC6-210ENST00000441703 CNOT6LQ96LI5 555 aaKnown RBP6.92□□□□□ -1.3
HDAC6-210ENST00000441703 ZMYND12Q9H0C1 365 aa6.92□□□□□ -1.3
HDAC6-210ENST00000441703 ACTR5Q9H9F9 607 aaPredicted RBP6.92□□□□□ -1.3
HDAC6-210ENST00000441703 MRPL44Q9H9J2 332 aaKnown RBP6.92□□□□□ -1.3
HDAC6-210ENST00000441703 BATF3Q9NR55 127 aa6.92□□□□□ -1.3
HDAC6-210ENST00000441703 TMEM74BQ9NUR3 256 aa6.92□□□□□ -1.3
HDAC6-210ENST00000441703 INTS13Q9NVM9 706 aa6.92□□□□□ -1.3
HDAC6-210ENST00000441703 DNAAF2Q9NVR5 837 aaKnown RBP6.92□□□□□ -1.3
HDAC6-210ENST00000441703 NXF1Q9UBU9 619 aaKnown RBP6.92□□□□□ -1.3
HDAC6-210ENST00000441703 DNMT3LQ9UJW3 386 aa6.92□□□□□ -1.3
HDAC6-210ENST00000441703 ODF2LQ9ULJ1 636 aa6.92□□□□□ -1.3
HDAC6-210ENST00000441703 HPSEQ9Y251 543 aa6.92□□□□□ -1.3
HDAC6-210ENST00000441703 CAPN7Q9Y6W3 813 aa6.92□□□□□ -1.3
HDAC6-210ENST00000441703 PTPRBP23467 1997 aa6.91□□□□□ -1.3
HDAC6-210ENST00000441703 GON4LQ3T8J9 2241 aa6.91□□□□□ -1.3
HDAC6-210ENST00000441703 A0A1B0GUA9 196 aa6.91□□□□□ -1.3
HDAC6-210ENST00000441703 GOLGA6CA6NDK9 693 aa6.91□□□□□ -1.3
HDAC6-210ENST00000441703 GOLGA8CPA6NN73 597 aa6.91□□□□□ -1.3
HDAC6-210ENST00000441703 ENO4A6NNW6 628 aa6.91□□□□□ -1.3
HDAC6-210ENST00000441703 E9PAM4 449 aa6.91□□□□□ -1.3
HDAC6-210ENST00000441703 H7C4K7 107 aa6.91□□□□□ -1.3
HDAC6-210ENST00000441703 INO80B-WBP1J3KQ70 363 aa6.91□□□□□ -1.3
HDAC6-210ENST00000441703 AGPSO00116 658 aa6.91□□□□□ -1.3
HDAC6-210ENST00000441703 ARHGAP33O14559 1287 aa6.91□□□□□ -1.3
HDAC6-210ENST00000441703 ASAP2O43150 1006 aa6.91□□□□□ -1.3
HDAC6-210ENST00000441703 PPP6R2O75170 966 aa6.91□□□□□ -1.3
HDAC6-210ENST00000441703 PSMD10O75832 226 aa6.91□□□□□ -1.3
HDAC6-210ENST00000441703 B3GAT3O94766 335 aa6.91□□□□□ -1.3
HDAC6-210ENST00000441703 ABLIM3O94929 683 aa6.91□□□□□ -1.3
HDAC6-210ENST00000441703 CTDNEP1O95476 244 aa6.91□□□□□ -1.3
HDAC6-210ENST00000441703 SEC24AO95486 1093 aa6.91□□□□□ -1.3
HDAC6-210ENST00000441703 RHOXF2BP0C7M4 288 aa6.91□□□□□ -1.3
HDAC6-210ENST00000441703 GOLGA6DP0CG33 693 aa6.91□□□□□ -1.3
HDAC6-210ENST00000441703 HLA-EP13747 358 aa6.91□□□□□ -1.3
HDAC6-210ENST00000441703 SCP2P22307 547 aa6.91□□□□□ -1.3
HDAC6-210ENST00000441703 ITPKAP23677 461 aa6.91□□□□□ -1.3
HDAC6-210ENST00000441703 TKTP29401 623 aaKnown RBP6.91□□□□□ -1.3
HDAC6-210ENST00000441703 RFC5P40937 340 aa6.91□□□□□ -1.3
HDAC6-210ENST00000441703 IL12RB1P42701 662 aa6.91□□□□□ -1.3
HDAC6-210ENST00000441703 PTGER3P43115 390 aa6.91□□□□□ -1.3
HDAC6-210ENST00000441703 SSR1P43307 286 aaKnown RBP6.91□□□□□ -1.3
HDAC6-210ENST00000441703 EPHA5P54756 1037 aa6.91□□□□□ -1.3
HDAC6-210ENST00000441703 PSMC5P62195 406 aa6.91□□□□□ -1.3
HDAC6-210ENST00000441703 CXADRP78310 365 aa6.91□□□□□ -1.3
HDAC6-210ENST00000441703 EXOSC10Q01780 885 aaKnown RBP6.91□□□□□ -1.3
HDAC6-210ENST00000441703 CEBPZQ03701 1054 aaKnown RBP6.91□□□□□ -1.3
HDAC6-210ENST00000441703 ACTN3Q08043 901 aaPredicted RBP6.91□□□□□ -1.3
HDAC6-210ENST00000441703 LAMTOR4Q0VGL1 99 aa6.91□□□□□ -1.3
HDAC6-210ENST00000441703 PLD1Q13393 1074 aa6.91□□□□□ -1.3
HDAC6-210ENST00000441703 RUNX3Q13761 415 aa6.91□□□□□ -1.3
HDAC6-210ENST00000441703 PPP2R5AQ15172 486 aa6.91□□□□□ -1.3
HDAC6-210ENST00000441703 RTN1Q16799 776 aa6.91□□□□□ -1.3
HDAC6-210ENST00000441703 PFKFB3Q16875 520 aaPredicted RBP6.91□□□□□ -1.3
HDAC6-210ENST00000441703 ZNF569Q5MCW4 686 aa6.91□□□□□ -1.3
HDAC6-210ENST00000441703 SPDYCQ5MJ68 293 aa6.91□□□□□ -1.3
HDAC6-210ENST00000441703 GPR158Q5T848 1215 aa6.91□□□□□ -1.3
HDAC6-210ENST00000441703 ALS2CLQ60I27 953 aa6.91□□□□□ -1.3
HDAC6-210ENST00000441703 TPGS2Q68CL5 300 aa6.91□□□□□ -1.3
HDAC6-210ENST00000441703 PLA2G4FQ68DD2 849 aa6.91□□□□□ -1.3
HDAC6-210ENST00000441703 SLC8B1Q6J4K2 584 aa6.91□□□□□ -1.3
HDAC6-210ENST00000441703 TLDC1Q6P9B6 456 aa6.91□□□□□ -1.3
HDAC6-210ENST00000441703 CPLX2Q6PUV4 134 aaKnown RBP6.91□□□□□ -1.3
HDAC6-210ENST00000441703 APOA5Q6Q788 366 aa6.91□□□□□ -1.3
HDAC6-210ENST00000441703 ZNF662Q6ZS27 426 aa6.91□□□□□ -1.3
HDAC6-210ENST00000441703 DHX32Q7L7V1 743 aaKnown RBP6.91□□□□□ -1.3
HDAC6-210ENST00000441703 PRICKLE2Q7Z3G6 844 aa6.91□□□□□ -1.3
HDAC6-210ENST00000441703 SLCO6A1Q86UG4 719 aa6.91□□□□□ -1.3
HDAC6-210ENST00000441703 MARCH9Q86YJ5 346 aa6.91□□□□□ -1.3
HDAC6-210ENST00000441703 IFNLR1Q8IU57 520 aaPredicted RBP6.91□□□□□ -1.3
HDAC6-210ENST00000441703 PDILTQ8N807 584 aa6.91□□□□□ -1.3
HDAC6-210ENST00000441703 MAB21L3Q8N8X9 362 aa6.91□□□□□ -1.3
HDAC6-210ENST00000441703 MLKLQ8NB16 471 aa6.91□□□□□ -1.3
HDAC6-210ENST00000441703 C3orf20Q8ND61 904 aa6.91□□□□□ -1.3
HDAC6-210ENST00000441703 C1orf131Q8NDD1 294 aaKnown RBP6.91□□□□□ -1.3
HDAC6-210ENST00000441703 RNF217Q8TC41 542 aa6.91□□□□□ -1.3
HDAC6-210ENST00000441703 BCAS4Q8TDM0 211 aa6.91□□□□□ -1.3
HDAC6-210ENST00000441703 SETD7Q8WTS6 366 aaKnown RBP6.91□□□□□ -1.3
HDAC6-210ENST00000441703 TCP11Q8WWU5 503 aa6.91□□□□□ -1.3
HDAC6-210ENST00000441703 PRPF31Q8WWY3 499 aaKnown RBP6.91□□□□□ -1.3
HDAC6-210ENST00000441703 NXPE2Q96DL1 559 aa6.91□□□□□ -1.3
HDAC6-210ENST00000441703 FAM212AQ96EL1 285 aa6.91□□□□□ -1.3
HDAC6-210ENST00000441703 P2RY13Q9BPV8 354 aa6.91□□□□□ -1.3
HDAC6-210ENST00000441703 RHOXF2Q9BQY4 288 aa6.91□□□□□ -1.3
HDAC6-210ENST00000441703 CRACR2AQ9BSW2 395 aa6.91□□□□□ -1.3
HDAC6-210ENST00000441703 PI4K2AQ9BTU6 479 aa6.91□□□□□ -1.3
HDAC6-210ENST00000441703 ATXN3LQ9H3M9 355 aa6.91□□□□□ -1.3
HDAC6-210ENST00000441703 DHX33Q9H6R0 707 aaKnown RBP6.91□□□□□ -1.3
HDAC6-210ENST00000441703 C6orf50Q9HD87 102 aa6.91□□□□□ -1.3
HDAC6-210ENST00000441703 KLC4Q9NSK0 619 aa6.91□□□□□ -1.3
HDAC6-210ENST00000441703 BMP2KQ9NSY1 1161 aaPredicted RBP6.91□□□□□ -1.3
HDAC6-210ENST00000441703 FANCLQ9NW38 375 aa6.91□□□□□ -1.3
HDAC6-210ENST00000441703 GOLGA6AQ9NYA3 693 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms