RNA–Protein interactions for RNA: ENST00000440835.6

PTPRR-204, Transcript of protein tyrosine phosphatase, receptor type R, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRR, Length 2,818 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRR-204ENST00000440835 RAD54LQ92698 747 aa6.43□□□□□ -1.38
PTPRR-204ENST00000440835 ATP2A3Q93084 1043 aa6.43□□□□□ -1.38
PTPRR-204ENST00000440835 LRRC27Q9C0I9 530 aa6.43□□□□□ -1.38
PTPRR-204ENST00000440835 IL21Q9HBE4 155 aa6.43□□□□□ -1.38
PTPRR-204ENST00000440835 GDAP2Q9NXN4 497 aa6.43□□□□□ -1.38
PTPRR-204ENST00000440835 DPP3Q9NY33 737 aa6.43□□□□□ -1.38
PTPRR-204ENST00000440835 PSD3Q9NYI0 1048 aa6.43□□□□□ -1.38
PTPRR-204ENST00000440835 HOOK1Q9UJC3 728 aaKnown RBP6.43□□□□□ -1.38
PTPRR-204ENST00000440835 ANGPTL2Q9UKU9 493 aa6.43□□□□□ -1.38
PTPRR-204ENST00000440835 ITGA11Q9UKX5 1188 aa6.43□□□□□ -1.38
PTPRR-204ENST00000440835 USP20Q9Y2K6 914 aa6.43□□□□□ -1.38
PTPRR-204ENST00000440835 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP6.43□□□□□ -1.38
PTPRR-204ENST00000440835 COL4A3Q01955 1670 aa6.43□□□□□ -1.38
PTPRR-204ENST00000440835 PLXND1Q9Y4D7 1925 aa6.43□□□□□ -1.38
PTPRR-204ENST00000440835 CYB561D2O14569 222 aa6.43□□□□□ -1.38
PTPRR-204ENST00000440835 KIF1CO43896 1103 aaKnown RBP6.43□□□□□ -1.38
PTPRR-204ENST00000440835 CUTAO60888 179 aa6.43□□□□□ -1.38
PTPRR-204ENST00000440835 RPP40O75818 363 aaKnown RBP6.43□□□□□ -1.38
PTPRR-204ENST00000440835 F11P03951 625 aa6.43□□□□□ -1.38
PTPRR-204ENST00000440835 KRT18P05783 430 aaKnown RBP6.43□□□□□ -1.38
PTPRR-204ENST00000440835 HARSP12081 509 aaKnown RBP6.43□□□□□ -1.38
PTPRR-204ENST00000440835 PCSK1P29120 753 aa6.43□□□□□ -1.38
PTPRR-204ENST00000440835 PMLP29590 882 aa6.43□□□□□ -1.38
PTPRR-204ENST00000440835 SNRPFP62306 86 aaKnown RBP6.43□□□□□ -1.38
PTPRR-204ENST00000440835 CACNB1Q02641 598 aaPredicted RBP6.43□□□□□ -1.38
PTPRR-204ENST00000440835 ZRSR1Q15695 479 aaKnown RBP6.43□□□□□ -1.38
PTPRR-204ENST00000440835 ST3GAL2Q16842 350 aa6.43□□□□□ -1.38
PTPRR-204ENST00000440835 CFAP221Q4G0U5 840 aa6.43□□□□□ -1.38
PTPRR-204ENST00000440835 ARSHQ5FYA8 562 aa6.43□□□□□ -1.38
PTPRR-204ENST00000440835 ADALQ6DHV7 355 aa6.43□□□□□ -1.38
PTPRR-204ENST00000440835 JADE1Q6IE81 842 aa6.43□□□□□ -1.38
PTPRR-204ENST00000440835 FAM173BQ6P4H8 233 aa6.43□□□□□ -1.38
PTPRR-204ENST00000440835 TSSK4Q6SA08 328 aa6.43□□□□□ -1.38
PTPRR-204ENST00000440835 STXBP4Q6ZWJ1 553 aa6.43□□□□□ -1.38
PTPRR-204ENST00000440835 DDX42Q86XP3 938 aaKnown RBP eCLIP6.43□□□□□ -1.38
PTPRR-204ENST00000440835 TOP6BLQ8N6T0 577 aa6.43□□□□□ -1.38
PTPRR-204ENST00000440835 KCNV2Q8TDN2 545 aa6.43□□□□□ -1.38
PTPRR-204ENST00000440835 RSPRY1Q96DX4 576 aa6.43□□□□□ -1.38
PTPRR-204ENST00000440835 SPATA17Q96L03 361 aa6.43□□□□□ -1.38
PTPRR-204ENST00000440835 REEP2Q9BRK0 252 aa6.43□□□□□ -1.38
PTPRR-204ENST00000440835 TDP1Q9NUW8 608 aa6.43□□□□□ -1.38
PTPRR-204ENST00000440835 AGO2Q9UKV8 859 aaKnown RBP6.43□□□□□ -1.38
PTPRR-204ENST00000440835 SLC9A3R1O14745 358 aaPredicted RBP6.42□□□□□ -1.38
PTPRR-204ENST00000440835 TM4SF5O14894 197 aa6.42□□□□□ -1.38
PTPRR-204ENST00000440835 APBB3O95704 486 aa6.42□□□□□ -1.38
PTPRR-204ENST00000440835 EIF2DP41214 584 aaKnown RBP6.42□□□□□ -1.38
PTPRR-204ENST00000440835 CORO7P57737 925 aa6.42□□□□□ -1.38
PTPRR-204ENST00000440835 BFSP1Q12934 665 aa6.42□□□□□ -1.38
PTPRR-204ENST00000440835 USP4Q13107 963 aa6.42□□□□□ -1.38
PTPRR-204ENST00000440835 GAS6Q14393 721 aa6.42□□□□□ -1.38
PTPRR-204ENST00000440835 SLC39A14Q15043 492 aa6.42□□□□□ -1.38
PTPRR-204ENST00000440835 AASDHQ4L235 1098 aaPredicted RBP6.42□□□□□ -1.38
PTPRR-204ENST00000440835 SLC39A12Q504Y0 691 aa6.42□□□□□ -1.38
PTPRR-204ENST00000440835 LMBRD2Q68DH5 695 aaPredicted RBP6.42□□□□□ -1.38
PTPRR-204ENST00000440835 FILIP1Q7Z7B0 1213 aa6.42□□□□□ -1.38
PTPRR-204ENST00000440835 LINC00301Q8NCQ3 95 aa6.42□□□□□ -1.38
PTPRR-204ENST00000440835 CNTNAP3BQ96NU0 1288 aa6.42□□□□□ -1.38
PTPRR-204ENST00000440835 ACCSQ96QU6 501 aa6.42□□□□□ -1.38
PTPRR-204ENST00000440835 PYM1Q9BRP8 204 aaKnown RBP6.42□□□□□ -1.38
PTPRR-204ENST00000440835 CNTNAP3Q9BZ76 1288 aa6.42□□□□□ -1.38
PTPRR-204ENST00000440835 HAPLN2Q9GZV7 340 aa6.42□□□□□ -1.38
PTPRR-204ENST00000440835 TNMDQ9H2S6 317 aa6.42□□□□□ -1.38
PTPRR-204ENST00000440835 METTL14Q9HCE5 456 aaKnown RBP6.42□□□□□ -1.38
PTPRR-204ENST00000440835 KIAA1586Q9HCI6 787 aa6.42□□□□□ -1.38
PTPRR-204ENST00000440835 PCDHB13Q9Y5F0 798 aa6.42□□□□□ -1.38
PTPRR-204ENST00000440835 TRAV19A0A0A6YYK7 116 aa6.42□□□□□ -1.38
PTPRR-204ENST00000440835 VWA3AA6NCI4 1184 aa6.42□□□□□ -1.38
PTPRR-204ENST00000440835 SLC38A8A6NNN8 435 aa6.42□□□□□ -1.38
PTPRR-204ENST00000440835 KPNA7A9QM74 516 aa6.42□□□□□ -1.38
PTPRR-204ENST00000440835 CDC25BP30305 580 aa6.42□□□□□ -1.38
PTPRR-204ENST00000440835 HOXD12P35452 270 aa6.42□□□□□ -1.38
PTPRR-204ENST00000440835 FAM160A1Q05DH4 1040 aa6.42□□□□□ -1.38
PTPRR-204ENST00000440835 PON2Q15165 354 aa6.42□□□□□ -1.38
PTPRR-204ENST00000440835 MGAT5BQ3V5L5 792 aa6.42□□□□□ -1.38
PTPRR-204ENST00000440835 VSTM1Q6UX27 236 aa6.42□□□□□ -1.38
PTPRR-204ENST00000440835 C4orf50Q6ZRC1 276 aa6.42□□□□□ -1.38
PTPRR-204ENST00000440835 MMS22LQ6ZRQ5 1243 aa6.42□□□□□ -1.38
PTPRR-204ENST00000440835 RABEPKQ7Z6M1 372 aa6.42□□□□□ -1.38
PTPRR-204ENST00000440835 ATAD1Q8NBU5 361 aa6.42□□□□□ -1.38
PTPRR-204ENST00000440835 OSCP1Q8WVF1 389 aa6.42□□□□□ -1.38
PTPRR-204ENST00000440835 LARP4BQ92615 738 aaKnown RBP6.42□□□□□ -1.38
PTPRR-204ENST00000440835 P2RY13Q9BPV8 354 aa6.42□□□□□ -1.38
PTPRR-204ENST00000440835 STRA6Q9BX79 667 aa6.42□□□□□ -1.38
PTPRR-204ENST00000440835 OLFML3Q9NRN5 406 aa6.42□□□□□ -1.38
PTPRR-204ENST00000440835 GKN1Q9NS71 199 aa6.42□□□□□ -1.38
PTPRR-204ENST00000440835 KCND1Q9NSA2 647 aa6.42□□□□□ -1.38
PTPRR-204ENST00000440835 WDR70Q9NW82 654 aa6.42□□□□□ -1.38
PTPRR-204ENST00000440835 COMMD8Q9NX08 183 aa6.42□□□□□ -1.38
PTPRR-204ENST00000440835 EP300Q09472 2414 aaPredicted RBP6.42□□□□□ -1.38
PTPRR-204ENST00000440835 WDFY4Q6ZS81 3184 aa6.41□□□□□ -1.38
PTPRR-204ENST00000440835 SPAG17Q6Q759 2223 aa6.41□□□□□ -1.38
PTPRR-204ENST00000440835 LOC105378220A0A1B0GUY1 285 aaPredicted RBP6.41□□□□□ -1.38
PTPRR-204ENST00000440835 SFI1A8K8P3 1242 aa6.41□□□□□ -1.38
PTPRR-204ENST00000440835 PP2D1A8MPX8 630 aa6.41□□□□□ -1.38
PTPRR-204ENST00000440835 UPK3BL1B0FP48 263 aa6.41□□□□□ -1.38
PTPRR-204ENST00000440835 UPK3BL2E5RIL1 263 aa6.41□□□□□ -1.38
PTPRR-204ENST00000440835 AXIN1O15169 862 aa6.41□□□□□ -1.38
PTPRR-204ENST00000440835 FANCGO15287 622 aa6.41□□□□□ -1.38
PTPRR-204ENST00000440835 CREB3O43889 395 aa6.41□□□□□ -1.38
PTPRR-204ENST00000440835 HUS1O60921 280 aa6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms