RNA–Protein interactions for RNA: ENST00000440653.1

HDAC6-209, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 658 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-209ENST00000440653 CILPO75339 1184 aa9.63□□□□□ -0.87
HDAC6-209ENST00000440653 KRT1P04264 644 aa9.63□□□□□ -0.87
HDAC6-209ENST00000440653 ITGB3P05106 788 aa9.63□□□□□ -0.87
HDAC6-209ENST00000440653 KRT19P08727 400 aa9.63□□□□□ -0.87
HDAC6-209ENST00000440653 KRT7P08729 469 aa9.63□□□□□ -0.87
HDAC6-209ENST00000440653 SETSIPP0DME0 302 aa9.63□□□□□ -0.87
HDAC6-209ENST00000440653 VDRP11473 427 aa9.63□□□□□ -0.87
HDAC6-209ENST00000440653 SMPD1P17405 629 aa9.63□□□□□ -0.87
HDAC6-209ENST00000440653 ATF7P17544 494 aaPredicted RBP9.63□□□□□ -0.87
HDAC6-209ENST00000440653 NR1D1P20393 614 aa9.63□□□□□ -0.87
HDAC6-209ENST00000440653 BRD2P25440 801 aaKnown RBP9.63□□□□□ -0.87
HDAC6-209ENST00000440653 YARSP54577 528 aaKnown RBP9.63□□□□□ -0.87
HDAC6-209ENST00000440653 RBP5P82980 135 aa9.63□□□□□ -0.87
HDAC6-209ENST00000440653 KRT17Q04695 432 aa9.63□□□□□ -0.87
HDAC6-209ENST00000440653 DHX9Q08211 1270 aaKnown RBP9.63□□□□□ -0.87
HDAC6-209ENST00000440653 KLF1Q13351 362 aaPredicted RBP9.63□□□□□ -0.87
HDAC6-209ENST00000440653 KCNA10Q16322 511 aa9.63□□□□□ -0.87
HDAC6-209ENST00000440653 SEZ6Q53EL9 994 aa9.63□□□□□ -0.87
HDAC6-209ENST00000440653 ODF2Q5BJF6 829 aa9.63□□□□□ -0.87
HDAC6-209ENST00000440653 TTMPQ5BVD1 217 aa9.63□□□□□ -0.87
HDAC6-209ENST00000440653 PPP1R15BQ5SWA1 713 aa9.63□□□□□ -0.87
HDAC6-209ENST00000440653 CEP85LQ5SZL2 805 aa9.63□□□□□ -0.87
HDAC6-209ENST00000440653 JADE1Q6IE81 842 aa9.63□□□□□ -0.87
HDAC6-209ENST00000440653 SLC27A1Q6PCB7 646 aa9.63□□□□□ -0.87
HDAC6-209ENST00000440653 DRICH1Q6PGQ1 229 aaPredicted RBP9.63□□□□□ -0.87
HDAC6-209ENST00000440653 ERICH1Q86X53 443 aa9.63□□□□□ -0.87
HDAC6-209ENST00000440653 FAM126BQ8IXS8 530 aa9.63□□□□□ -0.87
HDAC6-209ENST00000440653 RCOR2Q8IZ40 523 aa9.63□□□□□ -0.87
HDAC6-209ENST00000440653 LRRC52Q8N7C0 313 aa9.63□□□□□ -0.87
HDAC6-209ENST00000440653 CCDC89Q8N998 374 aa9.63□□□□□ -0.87
HDAC6-209ENST00000440653 UBLCP1Q8WVY7 318 aaPredicted RBP9.63□□□□□ -0.87
HDAC6-209ENST00000440653 SNF8Q96H20 258 aa9.63□□□□□ -0.87
HDAC6-209ENST00000440653 BTBD6Q96KE9 485 aa9.63□□□□□ -0.87
HDAC6-209ENST00000440653 FAM84AQ96KN4 292 aa9.63□□□□□ -0.87
HDAC6-209ENST00000440653 ZNF560Q96MR9 790 aa9.63□□□□□ -0.87
HDAC6-209ENST00000440653 ACAP3Q96P50 834 aa9.63□□□□□ -0.87
HDAC6-209ENST00000440653 NCAPGQ9BPX3 1015 aa9.63□□□□□ -0.87
HDAC6-209ENST00000440653 TXLNGYQ9BZA5 131 aa9.63□□□□□ -0.87
HDAC6-209ENST00000440653 PABPC3Q9H361 631 aaKnown RBP9.63□□□□□ -0.87
HDAC6-209ENST00000440653 GRHL1Q9NZI5 618 aa9.63□□□□□ -0.87
HDAC6-209ENST00000440653 SIX4Q9UIU6 781 aa9.63□□□□□ -0.87
HDAC6-209ENST00000440653 WDR3Q9UNX4 943 aaKnown RBP eCLIP9.63□□□□□ -0.87
HDAC6-209ENST00000440653 EFR3BQ9Y2G0 817 aa9.63□□□□□ -0.87
HDAC6-209ENST00000440653 LACTBL1A8MY62 500 aa9.62□□□□□ -0.87
HDAC6-209ENST00000440653 TJP3O95049 919 aa9.62□□□□□ -0.87
HDAC6-209ENST00000440653 VTNP04004 478 aa9.62□□□□□ -0.87
HDAC6-209ENST00000440653 RARAP10276 462 aa9.62□□□□□ -0.87
HDAC6-209ENST00000440653 ATF2P15336 505 aa9.62□□□□□ -0.87
HDAC6-209ENST00000440653 CD19P15391 556 aa9.62□□□□□ -0.87
HDAC6-209ENST00000440653 ITIH2P19823 946 aa9.62□□□□□ -0.87
HDAC6-209ENST00000440653 RPL21P46778 160 aaKnown RBP9.62□□□□□ -0.87
HDAC6-209ENST00000440653 PMS2P54278 862 aa9.62□□□□□ -0.87
HDAC6-209ENST00000440653 ADCY2Q08462 1091 aa9.62□□□□□ -0.87
HDAC6-209ENST00000440653 ZNF844Q08AG5 666 aa9.62□□□□□ -0.87
HDAC6-209ENST00000440653 IFFO1Q0D2I5 559 aa9.62□□□□□ -0.87
HDAC6-209ENST00000440653 UAP1Q16222 522 aaPredicted RBP9.62□□□□□ -0.87
HDAC6-209ENST00000440653 CCNG2Q16589 344 aa9.62□□□□□ -0.87
HDAC6-209ENST00000440653 HADHQ16836 314 aaKnown RBP9.62□□□□□ -0.87
HDAC6-209ENST00000440653 WDR72Q3MJ13 1102 aa9.62□□□□□ -0.87
HDAC6-209ENST00000440653 CCSAPQ6IQ19 270 aaPredicted RBP9.62□□□□□ -0.87
HDAC6-209ENST00000440653 TTC27Q6P3X3 843 aa9.62□□□□□ -0.87
HDAC6-209ENST00000440653 ZDHHC24Q6UX98 284 aa9.62□□□□□ -0.87
HDAC6-209ENST00000440653 TRMT10CQ7L0Y3 403 aaKnown RBP9.62□□□□□ -0.87
HDAC6-209ENST00000440653 ADAT2Q7Z6V5 191 aaKnown RBP9.62□□□□□ -0.87
HDAC6-209ENST00000440653 TLK2Q86UE8 772 aa9.62□□□□□ -0.87
HDAC6-209ENST00000440653 CEP120Q8N960 986 aa9.62□□□□□ -0.87
HDAC6-209ENST00000440653 KLHDC9Q8NEP7 349 aa9.62□□□□□ -0.87
HDAC6-209ENST00000440653 BEST2Q8NFU1 509 aa9.62□□□□□ -0.87
HDAC6-209ENST00000440653 PIK3R5Q8WYR1 880 aa9.62□□□□□ -0.87
HDAC6-209ENST00000440653 EDAQ92838 391 aa9.62□□□□□ -0.87
HDAC6-209ENST00000440653 ART4Q93070 314 aa9.62□□□□□ -0.87
HDAC6-209ENST00000440653 RMDN1Q96DB5 314 aa9.62□□□□□ -0.87
HDAC6-209ENST00000440653 MCEEQ96PE7 176 aa9.62□□□□□ -0.87
HDAC6-209ENST00000440653 TSEN34Q9BSV6 310 aaKnown RBP9.62□□□□□ -0.87
HDAC6-209ENST00000440653 TMEM109Q9BVC6 243 aa9.62□□□□□ -0.87
HDAC6-209ENST00000440653 CAPS2Q9BXY5 557 aa9.62□□□□□ -0.87
HDAC6-209ENST00000440653 OSBPL8Q9BZF1 889 aa9.62□□□□□ -0.87
HDAC6-209ENST00000440653 DCLK3Q9C098 648 aa9.62□□□□□ -0.87
HDAC6-209ENST00000440653 PHACTR1Q9C0D0 580 aa9.62□□□□□ -0.87
HDAC6-209ENST00000440653 NEUROG2Q9H2A3 272 aa9.62□□□□□ -0.87
HDAC6-209ENST00000440653 SYNCQ9H7C4 482 aa9.62□□□□□ -0.87
HDAC6-209ENST00000440653 CNOT10Q9H9A5 744 aaKnown RBP9.62□□□□□ -0.87
HDAC6-209ENST00000440653 TMBIM4Q9HC24 238 aa9.62□□□□□ -0.87
HDAC6-209ENST00000440653 ASIC3Q9UHC3 531 aa9.62□□□□□ -0.87
HDAC6-209ENST00000440653 BARX2Q9UMQ3 279 aaPredicted RBP9.62□□□□□ -0.87
HDAC6-209ENST00000440653 ACACBO00763 2458 aa9.62□□□□□ -0.87
HDAC6-209ENST00000440653 GVINP1Q7Z2Y8 2422 aa9.62□□□□□ -0.87
HDAC6-209ENST00000440653 C11orf97A0A1B0GVM6 126 aaPredicted RBP9.61□□□□□ -0.87
HDAC6-209ENST00000440653 SIGLEC16A6NMB1 481 aa9.61□□□□□ -0.87
HDAC6-209ENST00000440653 ARVCFO00192 962 aa9.61□□□□□ -0.87
HDAC6-209ENST00000440653 EIF3HO15372 352 aaKnown RBP eCLIP9.61□□□□□ -0.87
HDAC6-209ENST00000440653 KPNA6O60684 536 aa9.61□□□□□ -0.87
HDAC6-209ENST00000440653 CST3P01034 146 aaPredicted RBP9.61□□□□□ -0.87
HDAC6-209ENST00000440653 CD4P01730 458 aa9.61□□□□□ -0.87
HDAC6-209ENST00000440653 KRT14P02533 472 aa9.61□□□□□ -0.87
HDAC6-209ENST00000440653 IQCF3P0C7M6 154 aa9.61□□□□□ -0.87
HDAC6-209ENST00000440653 GNAT1P11488 350 aa9.61□□□□□ -0.87
HDAC6-209ENST00000440653 RARGP13631 454 aa9.61□□□□□ -0.87
HDAC6-209ENST00000440653 ATP5DP30049 168 aa9.61□□□□□ -0.87
HDAC6-209ENST00000440653 PNPLA4P41247 253 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms