RNA–Protein interactions for RNA: ENST00000439775.1

SNRPD3-204, Transcript of small nuclear ribonucleoprotein D3 polypeptide, humanhuman

TSL 3

Gene SNRPD3, Length 640 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPD3-204ENST00000439775 EBF3Q9H4W6 596 aa17.35■□□□□ 0.37
SNRPD3-204ENST00000439775 NXF1Q9UBU9 619 aaKnown RBP17.35■□□□□ 0.37
SNRPD3-204ENST00000439775 SMG5Q9UPR3 1016 aaKnown RBP17.35■□□□□ 0.37
SNRPD3-204ENST00000439775 TRAF3IP3Q9Y228 551 aa17.35■□□□□ 0.37
SNRPD3-204ENST00000439775 DMXL1Q9Y485 3027 aa17.34■□□□□ 0.37
SNRPD3-204ENST00000439775 C2orf78A6NCI8 922 aa17.34■□□□□ 0.37
SNRPD3-204ENST00000439775 OTOL1A6NHN0 477 aaPredicted RBP17.34■□□□□ 0.37
SNRPD3-204ENST00000439775 F8VP50 259 aa17.34■□□□□ 0.37
SNRPD3-204ENST00000439775 PPP3CCP48454 512 aa17.34■□□□□ 0.37
SNRPD3-204ENST00000439775 USP46P62068 366 aa17.34■□□□□ 0.37
SNRPD3-204ENST00000439775 AMPD2Q01433 879 aa17.34■□□□□ 0.37
SNRPD3-204ENST00000439775 NFIL3Q16649 462 aa17.34■□□□□ 0.37
SNRPD3-204ENST00000439775 ZNF667Q5HYK9 610 aa17.34■□□□□ 0.37
SNRPD3-204ENST00000439775 TMEM196Q5HYL7 178 aa17.34■□□□□ 0.37
SNRPD3-204ENST00000439775 TMC2Q8TDI7 906 aa17.34■□□□□ 0.37
SNRPD3-204ENST00000439775 OSCP1Q8WVF1 389 aa17.34■□□□□ 0.37
SNRPD3-204ENST00000439775 CCDC47Q96A33 483 aaKnown RBP17.34■□□□□ 0.37
SNRPD3-204ENST00000439775 SMYD3Q9H7B4 428 aa17.34■□□□□ 0.37
SNRPD3-204ENST00000439775 ARHGAP26Q9UNA1 814 aa17.34■□□□□ 0.37
SNRPD3-204ENST00000439775 GPR179Q6PRD1 2367 aa17.33■□□□□ 0.37
SNRPD3-204ENST00000439775 SPTBN4Q9H254 2564 aa17.33■□□□□ 0.36
SNRPD3-204ENST00000439775 TRDMT1O14717 391 aaKnown RBP17.33■□□□□ 0.36
SNRPD3-204ENST00000439775 IKBKBO14920 756 aa17.33■□□□□ 0.36
SNRPD3-204ENST00000439775 MAPK13O15264 365 aa17.33■□□□□ 0.36
SNRPD3-204ENST00000439775 CALUO43852 315 aaPredicted RBP17.33■□□□□ 0.36
SNRPD3-204ENST00000439775 VNN1O95497 513 aa17.33■□□□□ 0.36
SNRPD3-204ENST00000439775 PRR29P0C7W0 189 aa17.33■□□□□ 0.36
SNRPD3-204ENST00000439775 ARSAP15289 507 aa17.33■□□□□ 0.36
SNRPD3-204ENST00000439775 DPYDQ12882 1025 aa17.33■□□□□ 0.36
SNRPD3-204ENST00000439775 ZACNQ401N2 412 aa17.33■□□□□ 0.36
SNRPD3-204ENST00000439775 CPA6Q8N4T0 437 aa17.33■□□□□ 0.36
SNRPD3-204ENST00000439775 ARL14EPQ8N8R7 260 aaPredicted RBP17.33■□□□□ 0.36
SNRPD3-204ENST00000439775 ATP2A3Q93084 1043 aa17.33■□□□□ 0.36
SNRPD3-204ENST00000439775 TNIP3Q96KP6 325 aa17.33■□□□□ 0.36
SNRPD3-204ENST00000439775 CYP2S1Q96SQ9 504 aa17.33■□□□□ 0.36
SNRPD3-204ENST00000439775 ZNF518BQ9C0D4 1074 aa17.33■□□□□ 0.36
SNRPD3-204ENST00000439775 TMEM30AQ9NV96 361 aa17.33■□□□□ 0.36
SNRPD3-204ENST00000439775 TRPM5Q9NZQ8 1165 aa17.33■□□□□ 0.36
SNRPD3-204ENST00000439775 FRMD4BQ9Y2L6 1034 aa17.33■□□□□ 0.36
SNRPD3-204ENST00000439775 GREB1Q4ZG55 1949 aa17.33■□□□□ 0.36
SNRPD3-204ENST00000439775 ATP8B3O60423 1300 aa17.32■□□□□ 0.36
SNRPD3-204ENST00000439775 K7ESF4 209 aa17.32■□□□□ 0.36
SNRPD3-204ENST00000439775 P4HA1P13674 534 aa17.32■□□□□ 0.36
SNRPD3-204ENST00000439775 HDCP19113 662 aa17.32■□□□□ 0.36
SNRPD3-204ENST00000439775 HOXA6P31267 233 aa17.32■□□□□ 0.36
SNRPD3-204ENST00000439775 ID4P47928 161 aa17.32■□□□□ 0.36
SNRPD3-204ENST00000439775 CACNA2D1P54289 1103 aa17.32■□□□□ 0.36
SNRPD3-204ENST00000439775 DLG4P78352 724 aa17.32■□□□□ 0.36
SNRPD3-204ENST00000439775 GRSF1Q12849 480 aaKnown RBP eCLIP17.32■□□□□ 0.36
SNRPD3-204ENST00000439775 CEP135Q66GS9 1140 aa17.32■□□□□ 0.36
SNRPD3-204ENST00000439775 FSTL4Q6MZW2 842 aa17.32■□□□□ 0.36
SNRPD3-204ENST00000439775 KRBA2Q6ZNG9 492 aa17.32■□□□□ 0.36
SNRPD3-204ENST00000439775 KIAA2013Q8IYS2 634 aa17.32■□□□□ 0.36
SNRPD3-204ENST00000439775 KIAA1958Q8N8K9 716 aa17.32■□□□□ 0.36
SNRPD3-204ENST00000439775 SH3RF2Q8TEC5 729 aa17.32■□□□□ 0.36
SNRPD3-204ENST00000439775 TAF4BQ92750 862 aa17.32■□□□□ 0.36
SNRPD3-204ENST00000439775 SECISBP2LQ93073 1101 aaKnown RBP17.32■□□□□ 0.36
SNRPD3-204ENST00000439775 EXOC4Q96A65 974 aa17.32■□□□□ 0.36
SNRPD3-204ENST00000439775 B3GNT5Q9BYG0 378 aa17.32■□□□□ 0.36
SNRPD3-204ENST00000439775 GOLPH3LQ9H4A5 285 aa17.32■□□□□ 0.36
SNRPD3-204ENST00000439775 ECT2Q9H8V3 914 aa17.32■□□□□ 0.36
SNRPD3-204ENST00000439775 DUS2Q9NX74 493 aaKnown RBP17.32■□□□□ 0.36
SNRPD3-204ENST00000439775 NCDNQ9UBB6 729 aa17.32■□□□□ 0.36
SNRPD3-204ENST00000439775 ZNF840PA6NDX5 716 aa17.31■□□□□ 0.36
SNRPD3-204ENST00000439775 CLSTN1O94985 981 aa17.31■□□□□ 0.36
SNRPD3-204ENST00000439775 OLFM2O95897 454 aa17.31■□□□□ 0.36
SNRPD3-204ENST00000439775 IFNAR2P48551 515 aa17.31■□□□□ 0.36
SNRPD3-204ENST00000439775 ENPEPQ07075 957 aa17.31■□□□□ 0.36
SNRPD3-204ENST00000439775 SGSM1Q2NKQ1 1148 aa17.31■□□□□ 0.36
SNRPD3-204ENST00000439775 EML3Q32P44 896 aa17.31■□□□□ 0.36
SNRPD3-204ENST00000439775 SCARA5Q6ZMJ2 495 aa17.31■□□□□ 0.36
SNRPD3-204ENST00000439775 SV2AQ7L0J3 742 aa17.31■□□□□ 0.36
SNRPD3-204ENST00000439775 GUF1Q8N442 669 aaKnown RBP17.31■□□□□ 0.36
SNRPD3-204ENST00000439775 DCLK2Q8N568 766 aa17.31■□□□□ 0.36
SNRPD3-204ENST00000439775 OVCA2Q8WZ82 227 aa17.31■□□□□ 0.36
SNRPD3-204ENST00000439775 SLITRK1Q96PX8 696 aa17.31■□□□□ 0.36
SNRPD3-204ENST00000439775 WNT6Q9Y6F9 365 aa17.31■□□□□ 0.36
SNRPD3-204ENST00000439775 ANAPC1Q9H1A4 1944 aa17.31■□□□□ 0.36
SNRPD3-204ENST00000439775 CLDN5O00501 218 aa17.3■□□□□ 0.36
SNRPD3-204ENST00000439775 ASS1P00966 412 aaKnown RBP17.3■□□□□ 0.36
SNRPD3-204ENST00000439775 OAS1P00973 400 aaKnown RBP17.3■□□□□ 0.36
SNRPD3-204ENST00000439775 DRD1P21728 446 aa17.3■□□□□ 0.36
SNRPD3-204ENST00000439775 NR2F2P24468 414 aa17.3■□□□□ 0.36
SNRPD3-204ENST00000439775 CNR2P34972 360 aa17.3■□□□□ 0.36
SNRPD3-204ENST00000439775 GJA4P35212 333 aa17.3■□□□□ 0.36
SNRPD3-204ENST00000439775 RAP1GAPP47736 663 aa17.3■□□□□ 0.36
SNRPD3-204ENST00000439775 CDH8P55286 799 aa17.3■□□□□ 0.36
SNRPD3-204ENST00000439775 SLC7A9P82251 487 aa17.3■□□□□ 0.36
SNRPD3-204ENST00000439775 FOXK2Q01167 660 aa17.3■□□□□ 0.36
SNRPD3-204ENST00000439775 TAF10Q12962 218 aa17.3■□□□□ 0.36
SNRPD3-204ENST00000439775 C1orf220Q5T0J3 134 aa17.3■□□□□ 0.36
SNRPD3-204ENST00000439775 INTS8Q75QN2 995 aaKnown RBP17.3■□□□□ 0.36
SNRPD3-204ENST00000439775 FAM35AQ86V20 835 aa17.3■□□□□ 0.36
SNRPD3-204ENST00000439775 LONP2Q86WA8 852 aa17.3■□□□□ 0.36
SNRPD3-204ENST00000439775 NUP93Q8N1F7 819 aa17.3■□□□□ 0.36
SNRPD3-204ENST00000439775 GPR161Q8N6U8 529 aaKnown RBP17.3■□□□□ 0.36
SNRPD3-204ENST00000439775 SMARCD1Q96GM5 515 aa17.3■□□□□ 0.36
SNRPD3-204ENST00000439775 P2RY13Q9BPV8 354 aa17.3■□□□□ 0.36
SNRPD3-204ENST00000439775 SDCBP2Q9H190 292 aa17.3■□□□□ 0.36
SNRPD3-204ENST00000439775 DMAP1Q9NPF5 467 aaPredicted RBP17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms