RNA–Protein interactions for RNA: ENST00000439613.2

HMGB1P37-201, Transcript of high mobility group box 1 pseudogene 37, humanhuman

BASIC

Gene HMGB1P37, Length 609 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P37-201ENST00000439613 BARX2Q9UMQ3 279 aaPredicted RBP4.22□□□□□ -1.73
HMGB1P37-201ENST00000439613 ST3GAL5Q9UNP4 418 aa4.22□□□□□ -1.73
HMGB1P37-201ENST00000439613 AGAP1Q9UPQ3 857 aa4.22□□□□□ -1.73
HMGB1P37-201ENST00000439613 IPPQ9Y573 584 aa4.22□□□□□ -1.73
HMGB1P37-201ENST00000439613 CEP83Q9Y592 693 aa4.22□□□□□ -1.73
HMGB1P37-201ENST00000439613 MRFAP1Q9Y605 127 aa4.22□□□□□ -1.73
HMGB1P37-201ENST00000439613 PTCH2Q9Y6C5 1203 aa4.22□□□□□ -1.73
HMGB1P37-201ENST00000439613 DUSP10Q9Y6W6 482 aa4.22□□□□□ -1.73
HMGB1P37-201ENST00000439613 SCN1AP35498 2009 aa4.22□□□□□ -1.73
HMGB1P37-201ENST00000439613 HTTP42858 3142 aa4.21□□□□□ -1.73
HMGB1P37-201ENST00000439613 PCNTO95613 3336 aa4.21□□□□□ -1.73
HMGB1P37-201ENST00000439613 TDRD15B5MCY1 1934 aaKnown RBP4.21□□□□□ -1.74
HMGB1P37-201ENST00000439613 UQCRHLA0A096LP55 91 aa4.21□□□□□ -1.74
HMGB1P37-201ENST00000439613 A0A0U1RQF3 1178 aa4.21□□□□□ -1.74
HMGB1P37-201ENST00000439613 A0A0U1RQJ8 604 aa4.21□□□□□ -1.74
HMGB1P37-201ENST00000439613 ARHGEF37A1IGU5 675 aa4.21□□□□□ -1.74
HMGB1P37-201ENST00000439613 CTAGE15A4D2H0 777 aa4.21□□□□□ -1.74
HMGB1P37-201ENST00000439613 TMCO5BA8MYB1 307 aa4.21□□□□□ -1.74
HMGB1P37-201ENST00000439613 MIF4GDA9UHW6 222 aaKnown RBP4.21□□□□□ -1.74
HMGB1P37-201ENST00000439613 PIRO00625 290 aa4.21□□□□□ -1.74
HMGB1P37-201ENST00000439613 CES2O00748 559 aa4.21□□□□□ -1.74
HMGB1P37-201ENST00000439613 EREGO14944 169 aa4.21□□□□□ -1.74
HMGB1P37-201ENST00000439613 MEFVO15553 781 aaPredicted RBP4.21□□□□□ -1.74
HMGB1P37-201ENST00000439613 THAP12O43422 761 aa4.21□□□□□ -1.74
HMGB1P37-201ENST00000439613 BUB1O43683 1085 aa4.21□□□□□ -1.74
HMGB1P37-201ENST00000439613 HUS1O60921 280 aa4.21□□□□□ -1.74
HMGB1P37-201ENST00000439613 TNFRSF21O75509 655 aa4.21□□□□□ -1.74
HMGB1P37-201ENST00000439613 PALMO75781 387 aa4.21□□□□□ -1.74
HMGB1P37-201ENST00000439613 ARHGEF15O94989 841 aa4.21□□□□□ -1.74
HMGB1P37-201ENST00000439613 KIF4AO95239 1232 aa4.21□□□□□ -1.74
HMGB1P37-201ENST00000439613 PARNO95453 639 aaKnown RBP4.21□□□□□ -1.74
HMGB1P37-201ENST00000439613 EOMESO95936 686 aa4.21□□□□□ -1.74
HMGB1P37-201ENST00000439613 CYP1A1P04798 512 aaPredicted RBP4.21□□□□□ -1.74
HMGB1P37-201ENST00000439613 CYP1A2P05177 515 aa4.21□□□□□ -1.74
HMGB1P37-201ENST00000439613 CALB1P05937 261 aa4.21□□□□□ -1.74
HMGB1P37-201ENST00000439613 TUBBP07437 444 aa4.21□□□□□ -1.74
HMGB1P37-201ENST00000439613 UQCRHP07919 91 aa4.21□□□□□ -1.74
HMGB1P37-201ENST00000439613 MMEP08473 750 aa4.21□□□□□ -1.74
HMGB1P37-201ENST00000439613 CTSHP09668 335 aa4.21□□□□□ -1.74
HMGB1P37-201ENST00000439613 WEE2P0C1S8 567 aa4.21□□□□□ -1.74
HMGB1P37-201ENST00000439613 CTAGE8P0CG41 777 aa4.21□□□□□ -1.74
HMGB1P37-201ENST00000439613 VDRP11473 427 aa4.21□□□□□ -1.74
HMGB1P37-201ENST00000439613 COL6A1P12109 1028 aa4.21□□□□□ -1.74
HMGB1P37-201ENST00000439613 UNGP13051 313 aaPredicted RBP4.21□□□□□ -1.74
HMGB1P37-201ENST00000439613 ACPPP15309 386 aa4.21□□□□□ -1.74
HMGB1P37-201ENST00000439613 CD19P15391 556 aa4.21□□□□□ -1.74
HMGB1P37-201ENST00000439613 SELPP16109 830 aa4.21□□□□□ -1.74
HMGB1P37-201ENST00000439613 HSPA6P17066 643 aa4.21□□□□□ -1.74
HMGB1P37-201ENST00000439613 CD58P19256 250 aa4.21□□□□□ -1.74
HMGB1P37-201ENST00000439613 LRPAP1P30533 357 aa4.21□□□□□ -1.74
HMGB1P37-201ENST00000439613 RPL9P32969 192 aaKnown RBP4.21□□□□□ -1.74
HMGB1P37-201ENST00000439613 PAFAH1B1P43034 410 aa4.21□□□□□ -1.74
HMGB1P37-201ENST00000439613 TAF6P49848 677 aa4.21□□□□□ -1.74
HMGB1P37-201ENST00000439613 CDK7P50613 346 aa4.21□□□□□ -1.74
HMGB1P37-201ENST00000439613 AMPD2Q01433 879 aa4.21□□□□□ -1.74
HMGB1P37-201ENST00000439613 TAGLNQ01995 201 aaKnown RBP4.21□□□□□ -1.74
HMGB1P37-201ENST00000439613 TAP1Q03518 808 aa4.21□□□□□ -1.74
HMGB1P37-201ENST00000439613 ITIH3Q06033 890 aa4.21□□□□□ -1.74
HMGB1P37-201ENST00000439613 MGAT3Q09327 533 aa4.21□□□□□ -1.74
HMGB1P37-201ENST00000439613 INCA1Q0VD86 236 aa4.21□□□□□ -1.74
HMGB1P37-201ENST00000439613 DSC3Q14574 896 aa4.21□□□□□ -1.74
HMGB1P37-201ENST00000439613 LPIN1Q14693 890 aa4.21□□□□□ -1.74
HMGB1P37-201ENST00000439613 TRIM71Q2Q1W2 868 aaKnown RBP4.21□□□□□ -1.74
HMGB1P37-201ENST00000439613 SV2CQ496J9 727 aa4.21□□□□□ -1.74
HMGB1P37-201ENST00000439613 ZNF618Q5T7W0 954 aa4.21□□□□□ -1.74
HMGB1P37-201ENST00000439613 MEI1Q5TIA1 1274 aa4.21□□□□□ -1.74
HMGB1P37-201ENST00000439613 CCDC181Q5TID7 509 aa4.21□□□□□ -1.74
HMGB1P37-201ENST00000439613 TAF3Q5VWG9 929 aa4.21□□□□□ -1.74
HMGB1P37-201ENST00000439613 C9orf57Q5W0N0 161 aa4.21□□□□□ -1.74
HMGB1P37-201ENST00000439613 CCDC70Q6NSX1 233 aa4.21□□□□□ -1.74
HMGB1P37-201ENST00000439613 C11orf63Q6NUN7 778 aa4.21□□□□□ -1.74
HMGB1P37-201ENST00000439613 DPH6Q7L8W6 267 aa4.21□□□□□ -1.74
HMGB1P37-201ENST00000439613 PEX26Q7Z412 305 aa4.21□□□□□ -1.74
HMGB1P37-201ENST00000439613 SLFN11Q7Z7L1 901 aa4.21□□□□□ -1.74
HMGB1P37-201ENST00000439613 DAAM2Q86T65 1068 aa4.21□□□□□ -1.74
HMGB1P37-201ENST00000439613 CTAGE6Q86UF2 777 aa4.21□□□□□ -1.74
HMGB1P37-201ENST00000439613 UNC93AQ86WB7 457 aa4.21□□□□□ -1.74
HMGB1P37-201ENST00000439613 CTAGE4Q8IX94 777 aa4.21□□□□□ -1.74
HMGB1P37-201ENST00000439613 TOP6BLQ8N6T0 577 aa4.21□□□□□ -1.74
HMGB1P37-201ENST00000439613 UBL4BQ8N7F7 174 aa4.21□□□□□ -1.74
HMGB1P37-201ENST00000439613 LRRC57Q8N9N7 239 aa4.21□□□□□ -1.74
HMGB1P37-201ENST00000439613 TMEM35BQ8NCS4 154 aa4.21□□□□□ -1.74
HMGB1P37-201ENST00000439613 CXorf38Q8TB03 319 aa4.21□□□□□ -1.74
HMGB1P37-201ENST00000439613 PPP1R13LQ8WUF5 828 aa4.21□□□□□ -1.74
HMGB1P37-201ENST00000439613 ATRIPQ8WXE1 791 aa4.21□□□□□ -1.74
HMGB1P37-201ENST00000439613 RSPH1Q8WYR4 309 aa4.21□□□□□ -1.74
HMGB1P37-201ENST00000439613 UBXN4Q92575 508 aa4.21□□□□□ -1.74
HMGB1P37-201ENST00000439613 ZNF653Q96CK0 615 aa4.21□□□□□ -1.74
HMGB1P37-201ENST00000439613 TMEM176AQ96HP8 235 aa4.21□□□□□ -1.74
HMGB1P37-201ENST00000439613 PBKQ96KB5 322 aa4.21□□□□□ -1.74
HMGB1P37-201ENST00000439613 FAM84AQ96KN4 292 aa4.21□□□□□ -1.74
HMGB1P37-201ENST00000439613 RPS6KC1Q96S38 1066 aa4.21□□□□□ -1.74
HMGB1P37-201ENST00000439613 MMS19Q96T76 1030 aa4.21□□□□□ -1.74
HMGB1P37-201ENST00000439613 PCDHB18PQ96TA0 734 aa4.21□□□□□ -1.74
HMGB1P37-201ENST00000439613 NAP1L3Q99457 506 aaPredicted RBP4.21□□□□□ -1.74
HMGB1P37-201ENST00000439613 MDFIQ99750 246 aa4.21□□□□□ -1.74
HMGB1P37-201ENST00000439613 SELENOOQ9BVL4 669 aa4.21□□□□□ -1.74
HMGB1P37-201ENST00000439613 APOL6Q9BWW8 343 aa4.21□□□□□ -1.74
HMGB1P37-201ENST00000439613 NT5C1AQ9BXI3 368 aa4.21□□□□□ -1.74
HMGB1P37-201ENST00000439613 FTHL17Q9BXU8 183 aa4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms