RNA–Protein interactions for RNA: ENST00000439374.6

CDC42SE1-202, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CDC42SE1, Length 3,498 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-202ENST00000439374 SENP7Q9BQF6 1050 aa10.39□□□□□ -0.75
CDC42SE1-202ENST00000439374 TXLNGYQ9BZA5 131 aa10.39□□□□□ -0.75
CDC42SE1-202ENST00000439374 PREBQ9HCU5 417 aa10.39□□□□□ -0.75
CDC42SE1-202ENST00000439374 UVRAGQ9P2Y5 699 aa10.39□□□□□ -0.75
CDC42SE1-202ENST00000439374 CSADQ9Y600 493 aa10.39□□□□□ -0.75
CDC42SE1-202ENST00000439374 ATP2A1O14983 1001 aa10.39□□□□□ -0.75
CDC42SE1-202ENST00000439374 B4GALT5O43286 388 aa10.39□□□□□ -0.75
CDC42SE1-202ENST00000439374 SLC26A4O43511 780 aa10.39□□□□□ -0.75
CDC42SE1-202ENST00000439374 EXTL3O43909 919 aa10.39□□□□□ -0.75
CDC42SE1-202ENST00000439374 RNF8O76064 485 aa10.39□□□□□ -0.75
CDC42SE1-202ENST00000439374 GZMAP12544 262 aa10.39□□□□□ -0.75
CDC42SE1-202ENST00000439374 HSPA6P17066 643 aa10.39□□□□□ -0.75
CDC42SE1-202ENST00000439374 HMGB2P26583 209 aaKnown RBP10.39□□□□□ -0.75
CDC42SE1-202ENST00000439374 FKBP1AP62942 108 aaKnown RBP10.39□□□□□ -0.75
CDC42SE1-202ENST00000439374 AMHR2Q16671 573 aa10.39□□□□□ -0.75
CDC42SE1-202ENST00000439374 GALNTL6Q49A17 601 aa10.39□□□□□ -0.75
CDC42SE1-202ENST00000439374 KCTD21Q4G0X4 260 aa10.39□□□□□ -0.75
CDC42SE1-202ENST00000439374 FOXB2Q5VYV0 432 aa10.39□□□□□ -0.75
CDC42SE1-202ENST00000439374 POTEAQ6S8J7 498 aa10.39□□□□□ -0.75
CDC42SE1-202ENST00000439374 ANKS1BQ7Z6G8 1248 aa10.39□□□□□ -0.75
CDC42SE1-202ENST00000439374 PRPF39Q86UA1 669 aaKnown RBP10.39□□□□□ -0.75
CDC42SE1-202ENST00000439374 LCA5Q86VQ0 697 aa10.39□□□□□ -0.75
CDC42SE1-202ENST00000439374 RAB3IL1Q8TBN0 382 aa10.39□□□□□ -0.75
CDC42SE1-202ENST00000439374 ZNF606Q8WXB4 792 aa10.39□□□□□ -0.75
CDC42SE1-202ENST00000439374 HEXIM2Q96MH2 286 aaKnown RBP10.39□□□□□ -0.75
CDC42SE1-202ENST00000439374 NDNQ99608 321 aa10.39□□□□□ -0.75
CDC42SE1-202ENST00000439374 GORASP1Q9BQQ3 440 aa10.39□□□□□ -0.75
CDC42SE1-202ENST00000439374 FAM49AQ9H0Q0 323 aaPredicted RBP10.39□□□□□ -0.75
CDC42SE1-202ENST00000439374 R3HDMLQ9H3Y0 253 aa10.39□□□□□ -0.75
CDC42SE1-202ENST00000439374 DCLRE1BQ9H816 532 aa10.39□□□□□ -0.75
CDC42SE1-202ENST00000439374 NGRNQ9NPE2 291 aaKnown RBP10.39□□□□□ -0.75
CDC42SE1-202ENST00000439374 NDE1Q9NXR1 346 aa10.39□□□□□ -0.75
CDC42SE1-202ENST00000439374 DIS3Q9Y2L1 958 aaKnown RBP10.39□□□□□ -0.75
CDC42SE1-202ENST00000439374 FIS1Q9Y3D6 152 aa10.39□□□□□ -0.75
CDC42SE1-202ENST00000439374 UBE4BO95155 1302 aa10.39□□□□□ -0.75
CDC42SE1-202ENST00000439374 FCHO1O14526 889 aa10.38□□□□□ -0.75
CDC42SE1-202ENST00000439374 SUPT3HO75486 399 aa10.38□□□□□ -0.75
CDC42SE1-202ENST00000439374 STAMBPO95630 424 aa10.38□□□□□ -0.75
CDC42SE1-202ENST00000439374 OATP04181 439 aa10.38□□□□□ -0.75
CDC42SE1-202ENST00000439374 ANXA13P27216 316 aa10.38□□□□□ -0.75
CDC42SE1-202ENST00000439374 RTP1P59025 263 aa10.38□□□□□ -0.75
CDC42SE1-202ENST00000439374 BPIFB4P59827 614 aa10.38□□□□□ -0.75
CDC42SE1-202ENST00000439374 PSMC1P62191 440 aaKnown RBP10.38□□□□□ -0.75
CDC42SE1-202ENST00000439374 ROR2Q01974 943 aaKnown RBP10.38□□□□□ -0.75
CDC42SE1-202ENST00000439374 TMEM63BQ5T3F8 832 aa10.38□□□□□ -0.75
CDC42SE1-202ENST00000439374 C1orf228Q6PIY5 440 aa10.38□□□□□ -0.75
CDC42SE1-202ENST00000439374 FBXO16Q8IX29 292 aaPredicted RBP10.38□□□□□ -0.75
CDC42SE1-202ENST00000439374 ATL2Q8NHH9 583 aa10.38□□□□□ -0.75
CDC42SE1-202ENST00000439374 CFAP57Q96MR6 1250 aa10.38□□□□□ -0.75
CDC42SE1-202ENST00000439374 GCNAQ96QF7 691 aa10.38□□□□□ -0.75
CDC42SE1-202ENST00000439374 MRPL47Q9HD33 250 aaKnown RBP10.38□□□□□ -0.75
CDC42SE1-202ENST00000439374 INPP5FQ9Y2H2 1132 aa10.38□□□□□ -0.75
CDC42SE1-202ENST00000439374 TDRKHQ9Y2W6 561 aaKnown RBP10.38□□□□□ -0.75
CDC42SE1-202ENST00000439374 MRPL42Q9Y6G3 142 aaKnown RBP10.38□□□□□ -0.75
CDC42SE1-202ENST00000439374 SLX4Q8IY92 1834 aa10.38□□□□□ -0.75
CDC42SE1-202ENST00000439374 ZNF541Q9H0D2 1346 aa10.38□□□□□ -0.75
CDC42SE1-202ENST00000439374 RGS20O76081 388 aa10.38□□□□□ -0.75
CDC42SE1-202ENST00000439374 PSMG1O95456 288 aa10.38□□□□□ -0.75
CDC42SE1-202ENST00000439374 HNRNPCP07910 306 aaKnown RBP eCLIP10.38□□□□□ -0.75
CDC42SE1-202ENST00000439374 SUPT20HL2P0C7V6 817 aa10.38□□□□□ -0.75
CDC42SE1-202ENST00000439374 ITIH2P19823 946 aa10.38□□□□□ -0.75
CDC42SE1-202ENST00000439374 RFX1P22670 979 aa10.38□□□□□ -0.75
CDC42SE1-202ENST00000439374 PTPN4P29074 926 aa10.38□□□□□ -0.75
CDC42SE1-202ENST00000439374 ABCG1P45844 678 aa10.38□□□□□ -0.75
CDC42SE1-202ENST00000439374 MAPK10P53779 464 aa10.38□□□□□ -0.75
CDC42SE1-202ENST00000439374 SUPT20HL1Q3ZLR7 823 aa10.38□□□□□ -0.75
CDC42SE1-202ENST00000439374 TREML2Q5T2D2 321 aa10.38□□□□□ -0.75
CDC42SE1-202ENST00000439374 C4orf50Q6ZRC1 276 aa10.38□□□□□ -0.75
CDC42SE1-202ENST00000439374 ZBTB8OSQ8IWT0 167 aa10.38□□□□□ -0.75
CDC42SE1-202ENST00000439374 CCDC110Q8TBZ0 833 aa10.38□□□□□ -0.75
CDC42SE1-202ENST00000439374 SH3TC2Q8TF17 1288 aa10.38□□□□□ -0.75
CDC42SE1-202ENST00000439374 DCLK3Q9C098 648 aa10.38□□□□□ -0.75
CDC42SE1-202ENST00000439374 UNKQ9C0B0 810 aaKnown RBP10.38□□□□□ -0.75
CDC42SE1-202ENST00000439374 MIS12Q9H081 205 aa10.38□□□□□ -0.75
CDC42SE1-202ENST00000439374 COL5A3P25940 1745 aaPredicted RBP10.38□□□□□ -0.75
CDC42SE1-202ENST00000439374 SCN9AQ15858 1988 aa10.38□□□□□ -0.75
CDC42SE1-202ENST00000439374 H7C0C1 242 aa10.38□□□□□ -0.75
CDC42SE1-202ENST00000439374 CREB3O43889 395 aa10.38□□□□□ -0.75
CDC42SE1-202ENST00000439374 NPM3O75607 178 aaKnown RBP10.38□□□□□ -0.75
CDC42SE1-202ENST00000439374 ATP5OP48047 213 aa10.38□□□□□ -0.75
CDC42SE1-202ENST00000439374 NCKAP1LP55160 1127 aa10.38□□□□□ -0.75
CDC42SE1-202ENST00000439374 USP46P62068 366 aa10.38□□□□□ -0.75
CDC42SE1-202ENST00000439374 NFX1Q12986 1120 aaKnown RBP10.38□□□□□ -0.75
CDC42SE1-202ENST00000439374 OR6B2Q6IFH4 312 aa10.38□□□□□ -0.75
CDC42SE1-202ENST00000439374 ASRGL1Q7L266 308 aa10.38□□□□□ -0.75
CDC42SE1-202ENST00000439374 KCTD6Q8NC69 237 aa10.38□□□□□ -0.75
CDC42SE1-202ENST00000439374 MTBPQ96DY7 904 aa10.38□□□□□ -0.75
CDC42SE1-202ENST00000439374 MOCOSQ96EN8 888 aa10.38□□□□□ -0.75
CDC42SE1-202ENST00000439374 DDX27Q96GQ7 796 aaKnown RBP10.38□□□□□ -0.75
CDC42SE1-202ENST00000439374 MPP4Q96JB8 637 aa10.38□□□□□ -0.75
CDC42SE1-202ENST00000439374 SPATA33Q96N06 139 aa10.38□□□□□ -0.75
CDC42SE1-202ENST00000439374 MANSC1Q9H8J5 431 aa10.38□□□□□ -0.75
CDC42SE1-202ENST00000439374 IFT122Q9HBG6 1241 aa10.38□□□□□ -0.75
CDC42SE1-202ENST00000439374 GPATCH2LQ9NWQ4 482 aa10.38□□□□□ -0.75
CDC42SE1-202ENST00000439374 HOXC10Q9NYD6 342 aa10.38□□□□□ -0.75
CDC42SE1-202ENST00000439374 HEMK1Q9Y5R4 338 aaPredicted RBP10.38□□□□□ -0.75
CDC42SE1-202ENST00000439374 SPDYE16A6NNV3 312 aaPredicted RBP10.37□□□□□ -0.75
CDC42SE1-202ENST00000439374 MAGEB3O15480 346 aa10.37□□□□□ -0.75
CDC42SE1-202ENST00000439374 AHCYL1O43865 530 aa10.37□□□□□ -0.75
CDC42SE1-202ENST00000439374 CCDC22O60826 627 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms