RNA–Protein interactions for RNA: ENST00000438964.6

ACTN1-204, Transcript of actinin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene ACTN1, Length 3,043 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-204ENST00000438964 PLIN4Q96Q06 1357 aa13.98□□□□□ -0.17
ACTN1-204ENST00000438964 I3L4J1 428 aa13.97□□□□□ -0.17
ACTN1-204ENST00000438964 RAG1P15918 1043 aa13.97□□□□□ -0.17
ACTN1-204ENST00000438964 PTPRJQ12913 1337 aa13.97□□□□□ -0.17
ACTN1-204ENST00000438964 ORC1Q13415 861 aa13.97□□□□□ -0.17
ACTN1-204ENST00000438964 FAM98CQ17RN3 349 aaKnown RBP13.97□□□□□ -0.17
ACTN1-204ENST00000438964 DHDDSQ86SQ9 333 aa13.97□□□□□ -0.17
ACTN1-204ENST00000438964 SLF2Q8IX21 1173 aa13.97□□□□□ -0.17
ACTN1-204ENST00000438964 TMEM130Q8N3G9 435 aa13.97□□□□□ -0.17
ACTN1-204ENST00000438964 EMC1Q8N766 993 aa13.97□□□□□ -0.17
ACTN1-204ENST00000438964 EXD1Q8NHP7 514 aa13.97□□□□□ -0.17
ACTN1-204ENST00000438964 RSAD2Q8WXG1 361 aa13.97□□□□□ -0.17
ACTN1-204ENST00000438964 BSNDQ8WZ55 320 aa13.97□□□□□ -0.17
ACTN1-204ENST00000438964 ERLEC1Q96DZ1 483 aa13.97□□□□□ -0.17
ACTN1-204ENST00000438964 CNBD2Q96M20 576 aa13.97□□□□□ -0.17
ACTN1-204ENST00000438964 TEKT3Q9BXF9 490 aa13.97□□□□□ -0.17
ACTN1-204ENST00000438964 GLT8D2Q9H1C3 349 aa13.97□□□□□ -0.17
ACTN1-204ENST00000438964 ACSS3Q9H6R3 686 aa13.97□□□□□ -0.17
ACTN1-204ENST00000438964 DBNDD1Q9H9R9 158 aa13.97□□□□□ -0.17
ACTN1-204ENST00000438964 SBF2Q86WG5 1849 aa13.97□□□□□ -0.17
ACTN1-204ENST00000438964 ZNF536O15090 1300 aa13.97□□□□□ -0.17
ACTN1-204ENST00000438964 A0A088AWK7 358 aa13.97□□□□□ -0.17
ACTN1-204ENST00000438964 ZSCAN9O15535 394 aaPredicted RBP13.97□□□□□ -0.17
ACTN1-204ENST00000438964 ASLP04424 464 aa13.97□□□□□ -0.17
ACTN1-204ENST00000438964 IL1R1P14778 569 aa13.97□□□□□ -0.17
ACTN1-204ENST00000438964 CRABP2P29373 138 aa13.97□□□□□ -0.17
ACTN1-204ENST00000438964 SLC39A4Q6P5W5 647 aa13.97□□□□□ -0.17
ACTN1-204ENST00000438964 SH3BP5LQ7L8J4 393 aa13.97□□□□□ -0.17
ACTN1-204ENST00000438964 RELL1Q8IUW5 271 aa13.97□□□□□ -0.17
ACTN1-204ENST00000438964 APLFQ8IW19 511 aaPredicted RBP13.97□□□□□ -0.17
ACTN1-204ENST00000438964 MOCOSQ96EN8 888 aa13.97□□□□□ -0.17
ACTN1-204ENST00000438964 TMEM8AQ9HCN3 771 aa13.97□□□□□ -0.17
ACTN1-204ENST00000438964 CAPN14A8MX76 684 aa13.96□□□□□ -0.17
ACTN1-204ENST00000438964 A8MXQ7 604 aa13.96□□□□□ -0.17
ACTN1-204ENST00000438964 G3V3G9 751 aa13.96□□□□□ -0.17
ACTN1-204ENST00000438964 PEX1O43933 1283 aa13.96□□□□□ -0.17
ACTN1-204ENST00000438964 RXRBP28702 533 aa13.96□□□□□ -0.17
ACTN1-204ENST00000438964 PHBP35232 272 aa13.96□□□□□ -0.17
ACTN1-204ENST00000438964 HIC1Q14526 733 aa13.96□□□□□ -0.17
ACTN1-204ENST00000438964 GSTA3Q16772 222 aa13.96□□□□□ -0.17
ACTN1-204ENST00000438964 BRDTQ58F21 947 aaPredicted RBP13.96□□□□□ -0.17
ACTN1-204ENST00000438964 ZBTB41Q5SVQ8 909 aa13.96□□□□□ -0.17
ACTN1-204ENST00000438964 DCAF8Q5TAQ9 597 aa13.96□□□□□ -0.17
ACTN1-204ENST00000438964 LIN9Q5TKA1 542 aa13.96□□□□□ -0.17
ACTN1-204ENST00000438964 APOBEC3HQ6NTF7 200 aaKnown RBP13.96□□□□□ -0.17
ACTN1-204ENST00000438964 ZBTB46Q86UZ6 589 aa13.96□□□□□ -0.17
ACTN1-204ENST00000438964 PDSS2Q86YH6 399 aa13.96□□□□□ -0.17
ACTN1-204ENST00000438964 ZNF513Q8N8E2 541 aaPredicted RBP13.96□□□□□ -0.17
ACTN1-204ENST00000438964 IWS1Q96ST2 819 aa13.96□□□□□ -0.17
ACTN1-204ENST00000438964 DDX43Q9NXZ2 648 aaKnown RBP13.96□□□□□ -0.17
ACTN1-204ENST00000438964 TAGLN3Q9UI15 199 aa13.96□□□□□ -0.17
ACTN1-204ENST00000438964 RPL26L1Q9UNX3 145 aaKnown RBP13.96□□□□□ -0.17
ACTN1-204ENST00000438964 CENPFP49454 3210 aa13.96□□□□□ -0.17
ACTN1-204ENST00000438964 C15orf38-AP3S2A0A0A6YYH1 394 aa13.96□□□□□ -0.17
ACTN1-204ENST00000438964 PSTPIP1O43586 416 aa13.96□□□□□ -0.17
ACTN1-204ENST00000438964 ITM2AO43736 263 aa13.96□□□□□ -0.17
ACTN1-204ENST00000438964 HNRNPCP07910 306 aaKnown RBP eCLIP13.96□□□□□ -0.17
ACTN1-204ENST00000438964 COG7P83436 770 aa13.96□□□□□ -0.17
ACTN1-204ENST00000438964 R3HDM1Q15032 1099 aaKnown RBP13.96□□□□□ -0.17
ACTN1-204ENST00000438964 OASLQ15646 514 aaKnown RBP13.96□□□□□ -0.17
ACTN1-204ENST00000438964 NET1Q7Z628 596 aaPredicted RBP13.96□□□□□ -0.17
ACTN1-204ENST00000438964 ARPINQ7Z6K5 226 aa13.96□□□□□ -0.17
ACTN1-204ENST00000438964 NUDCD3Q8IVD9 361 aa13.96□□□□□ -0.17
ACTN1-204ENST00000438964 GALNT4Q8N4A0 578 aa13.96□□□□□ -0.17
ACTN1-204ENST00000438964 OGFOD1Q8N543 542 aa13.96□□□□□ -0.17
ACTN1-204ENST00000438964 TTLL6Q8N841 843 aa13.96□□□□□ -0.17
ACTN1-204ENST00000438964 PPP1R14CQ8TAE6 165 aa13.96□□□□□ -0.17
ACTN1-204ENST00000438964 APOPT1Q96IL0 206 aa13.96□□□□□ -0.17
ACTN1-204ENST00000438964 S100A14Q9HCY8 104 aa13.96□□□□□ -0.17
ACTN1-204ENST00000438964 MAN1C1Q9NR34 630 aa13.96□□□□□ -0.17
ACTN1-204ENST00000438964 AFG3L2Q9Y4W6 797 aa13.96□□□□□ -0.17
ACTN1-204ENST00000438964 COMMD3-BMI1R4GMX3 469 aa13.96□□□□□ -0.17
ACTN1-204ENST00000438964 ADAMTSL1Q8N6G6 1762 aa13.96□□□□□ -0.18
ACTN1-204ENST00000438964 TM9SF1O15321 606 aa13.96□□□□□ -0.18
ACTN1-204ENST00000438964 FOXD2O60548 495 aaPredicted RBP13.96□□□□□ -0.18
ACTN1-204ENST00000438964 HNRNPCL1O60812 293 aaKnown RBP13.96□□□□□ -0.18
ACTN1-204ENST00000438964 WEE2P0C1S8 567 aa13.96□□□□□ -0.18
ACTN1-204ENST00000438964 POLR2MP0CAP2 368 aa13.96□□□□□ -0.18
ACTN1-204ENST00000438964 NCF2P19878 526 aaPredicted RBP13.96□□□□□ -0.18
ACTN1-204ENST00000438964 NT5C2P49902 561 aa13.96□□□□□ -0.18
ACTN1-204ENST00000438964 RAP1GDS1P52306 607 aa13.96□□□□□ -0.18
ACTN1-204ENST00000438964 NOMO3P69849 1222 aa13.96□□□□□ -0.18
ACTN1-204ENST00000438964 ABCB5Q2M3G0 1257 aa13.96□□□□□ -0.18
ACTN1-204ENST00000438964 TRMT5Q32P41 509 aaKnown RBP13.96□□□□□ -0.18
ACTN1-204ENST00000438964 DUS1LQ6P1R4 473 aaKnown RBP13.96□□□□□ -0.18
ACTN1-204ENST00000438964 SCARA5Q6ZMJ2 495 aa13.96□□□□□ -0.18
ACTN1-204ENST00000438964 UNC5BQ8IZJ1 945 aa13.96□□□□□ -0.18
ACTN1-204ENST00000438964 METTL25Q8N6Q8 603 aa13.96□□□□□ -0.18
ACTN1-204ENST00000438964 E2F7Q96AV8 911 aa13.96□□□□□ -0.18
ACTN1-204ENST00000438964 LENG1Q96BZ8 264 aaPredicted RBP13.96□□□□□ -0.18
ACTN1-204ENST00000438964 HSPBAP1Q96EW2 488 aa13.96□□□□□ -0.18
ACTN1-204ENST00000438964 KCNH7Q9NS40 1196 aa13.96□□□□□ -0.18
ACTN1-204ENST00000438964 STRIP2Q9ULQ0 834 aa13.96□□□□□ -0.18
ACTN1-204ENST00000438964 DNAJC6O75061 913 aa13.95□□□□□ -0.18
ACTN1-204ENST00000438964 KCNA4P22459 653 aa13.95□□□□□ -0.18
ACTN1-204ENST00000438964 PMLP29590 882 aa13.95□□□□□ -0.18
ACTN1-204ENST00000438964 YWHABP31946 246 aaKnown RBP13.95□□□□□ -0.18
ACTN1-204ENST00000438964 GPC3P51654 580 aa13.95□□□□□ -0.18
ACTN1-204ENST00000438964 FOLH1Q04609 750 aa13.95□□□□□ -0.18
ACTN1-204ENST00000438964 TLR1Q15399 786 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms