RNA–Protein interactions for RNA: ENST00000438629.2

LSM1P1-201, Transcript of LSM1 homolog, mRNA degradation associated pseudogene 1, humanhuman

BASIC

Gene LSM1P1, Length 273 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1P1-201ENST00000438629 HNRNPMP52272 730 aaKnown RBP eCLIP4.52□□□□□ -1.69
LSM1P1-201ENST00000438629 COPAP53621 1224 aa4.52□□□□□ -1.69
LSM1P1-201ENST00000438629 BCAT1P54687 386 aa4.52□□□□□ -1.69
LSM1P1-201ENST00000438629 FSTL1Q12841 308 aa4.52□□□□□ -1.69
LSM1P1-201ENST00000438629 GRM1Q13255 1194 aa4.52□□□□□ -1.69
LSM1P1-201ENST00000438629 ZNF750Q32MQ0 723 aa4.52□□□□□ -1.69
LSM1P1-201ENST00000438629 ZIK1Q3SY52 487 aaPredicted RBP4.52□□□□□ -1.69
LSM1P1-201ENST00000438629 ZNF618Q5T7W0 954 aa4.52□□□□□ -1.69
LSM1P1-201ENST00000438629 KLHDC7AQ5VTJ3 777 aa4.52□□□□□ -1.69
LSM1P1-201ENST00000438629 KAZNQ674X7 775 aa4.52□□□□□ -1.69
LSM1P1-201ENST00000438629 KIAA0895LQ68EN5 471 aa4.52□□□□□ -1.69
LSM1P1-201ENST00000438629 FCRL6Q6DN72 434 aa4.52□□□□□ -1.69
LSM1P1-201ENST00000438629 LAIR1Q6GTX8 287 aa4.52□□□□□ -1.69
LSM1P1-201ENST00000438629 MYLK4Q86YV6 388 aaPredicted RBP4.52□□□□□ -1.69
LSM1P1-201ENST00000438629 AMER2Q8N7J2 671 aa4.52□□□□□ -1.69
LSM1P1-201ENST00000438629 MYCBPAPQ8TBZ2 947 aa4.52□□□□□ -1.69
LSM1P1-201ENST00000438629 NEU4Q8WWR8 484 aaPredicted RBP4.52□□□□□ -1.69
LSM1P1-201ENST00000438629 LINC00476Q8WZB0 136 aa4.52□□□□□ -1.69
LSM1P1-201ENST00000438629 SNX27Q96L92 541 aa4.52□□□□□ -1.69
LSM1P1-201ENST00000438629 TOR3AQ9H497 397 aa4.52□□□□□ -1.69
LSM1P1-201ENST00000438629 GLOD4Q9HC38 313 aa4.52□□□□□ -1.69
LSM1P1-201ENST00000438629 PLCB1Q9NQ66 1216 aa4.52□□□□□ -1.69
LSM1P1-201ENST00000438629 TM7SF3Q9NS93 570 aa4.52□□□□□ -1.69
LSM1P1-201ENST00000438629 SYBUQ9NX95 663 aa4.52□□□□□ -1.69
LSM1P1-201ENST00000438629 DNMT3BQ9UBC3 853 aaKnown RBP4.52□□□□□ -1.69
LSM1P1-201ENST00000438629 USP22Q9UPT9 525 aa4.52□□□□□ -1.69
LSM1P1-201ENST00000438629 HS3ST3A1Q9Y663 406 aa4.52□□□□□ -1.69
LSM1P1-201ENST00000438629 ABHD14A-ACY1A0A1B0GW23 586 aa4.51□□□□□ -1.69
LSM1P1-201ENST00000438629 PSMD9O00233 223 aa4.51□□□□□ -1.69
LSM1P1-201ENST00000438629 ADAMTS3O15072 1205 aa4.51□□□□□ -1.69
LSM1P1-201ENST00000438629 PPM1DO15297 605 aa4.51□□□□□ -1.69
LSM1P1-201ENST00000438629 CD3EAPO15446 510 aaKnown RBP4.51□□□□□ -1.69
LSM1P1-201ENST00000438629 KCNQ3O43525 872 aa4.51□□□□□ -1.69
LSM1P1-201ENST00000438629 NCK2O43639 380 aa4.51□□□□□ -1.69
LSM1P1-201ENST00000438629 SNX2O60749 519 aa4.51□□□□□ -1.69
LSM1P1-201ENST00000438629 COQ9O75208 318 aa4.51□□□□□ -1.69
LSM1P1-201ENST00000438629 PRKCBP05771 671 aa4.51□□□□□ -1.69
LSM1P1-201ENST00000438629 HARSP12081 509 aaKnown RBP4.51□□□□□ -1.69
LSM1P1-201ENST00000438629 EEF1GP26641 437 aaKnown RBP4.51□□□□□ -1.69
LSM1P1-201ENST00000438629 MPLP40238 635 aa4.51□□□□□ -1.69
LSM1P1-201ENST00000438629 SEC24CP53992 1094 aa4.51□□□□□ -1.69
LSM1P1-201ENST00000438629 KRTAP10-2P60368 255 aa4.51□□□□□ -1.69
LSM1P1-201ENST00000438629 MRPS35P82673 323 aaKnown RBP4.51□□□□□ -1.69
LSM1P1-201ENST00000438629 ZXDAP98168 799 aa4.51□□□□□ -1.69
LSM1P1-201ENST00000438629 TBCCQ15814 346 aa4.51□□□□□ -1.69
LSM1P1-201ENST00000438629 ERCC6LQ2NKX8 1250 aa4.51□□□□□ -1.69
LSM1P1-201ENST00000438629 C1orf228Q6PIY5 440 aa4.51□□□□□ -1.69
LSM1P1-201ENST00000438629 Q6YL49 198 aa4.51□□□□□ -1.69
LSM1P1-201ENST00000438629 VRK3Q8IV63 474 aa4.51□□□□□ -1.69
LSM1P1-201ENST00000438629 SYTL1Q8IYJ3 562 aa4.51□□□□□ -1.69
LSM1P1-201ENST00000438629 IZUMO1Q8IYV9 350 aa4.51□□□□□ -1.69
LSM1P1-201ENST00000438629 ABRAQ8N0Z2 381 aa4.51□□□□□ -1.69
LSM1P1-201ENST00000438629 SPICE1Q8N0Z3 855 aa4.51□□□□□ -1.69
LSM1P1-201ENST00000438629 ENAHQ8N8S7 591 aaPredicted RBP4.51□□□□□ -1.69
LSM1P1-201ENST00000438629 CYP2W1Q8TAV3 490 aa4.51□□□□□ -1.69
LSM1P1-201ENST00000438629 ATG4AQ8WYN0 398 aa4.51□□□□□ -1.69
LSM1P1-201ENST00000438629 LARP4BQ92615 738 aaKnown RBP4.51□□□□□ -1.69
LSM1P1-201ENST00000438629 PMM1Q92871 262 aa4.51□□□□□ -1.69
LSM1P1-201ENST00000438629 RSPRY1Q96DX4 576 aa4.51□□□□□ -1.69
LSM1P1-201ENST00000438629 ZDHHC12Q96GR4 267 aa4.51□□□□□ -1.69
LSM1P1-201ENST00000438629 TMEM41AQ96HV5 264 aa4.51□□□□□ -1.69
LSM1P1-201ENST00000438629 PBKQ96KB5 322 aa4.51□□□□□ -1.69
LSM1P1-201ENST00000438629 GBA2Q9HCG7 927 aaPredicted RBP4.51□□□□□ -1.69
LSM1P1-201ENST00000438629 ZBTB26Q9HCK0 441 aa4.51□□□□□ -1.69
LSM1P1-201ENST00000438629 TMOD4Q9NZQ9 345 aa4.51□□□□□ -1.69
LSM1P1-201ENST00000438629 MAN2B2Q9Y2E5 1009 aa4.51□□□□□ -1.69
LSM1P1-201ENST00000438629 DAAM1Q9Y4D1 1078 aa4.51□□□□□ -1.69
LSM1P1-201ENST00000438629 A1L4Q6 167 aa4.5□□□□□ -1.69
LSM1P1-201ENST00000438629 CYR61O00622 381 aa4.5□□□□□ -1.69
LSM1P1-201ENST00000438629 PLA2G6O60733 806 aa4.5□□□□□ -1.69
LSM1P1-201ENST00000438629 SRGAP2O75044 1071 aa4.5□□□□□ -1.69
LSM1P1-201ENST00000438629 GCP02774 474 aa4.5□□□□□ -1.69
LSM1P1-201ENST00000438629 CSF1RP07333 972 aa4.5□□□□□ -1.69
LSM1P1-201ENST00000438629 DLDP09622 509 aaKnown RBP4.5□□□□□ -1.69
LSM1P1-201ENST00000438629 CD19P15391 556 aa4.5□□□□□ -1.69
LSM1P1-201ENST00000438629 ZFXP17010 805 aaPredicted RBP4.5□□□□□ -1.69
LSM1P1-201ENST00000438629 SERPINB3P29508 390 aa4.5□□□□□ -1.69
LSM1P1-201ENST00000438629 PPM1AP35813 382 aa4.5□□□□□ -1.69
LSM1P1-201ENST00000438629 HSPA7P48741 367 aa4.5□□□□□ -1.69
LSM1P1-201ENST00000438629 MTHFSP49914 203 aa4.5□□□□□ -1.69
LSM1P1-201ENST00000438629 GATMP50440 423 aa4.5□□□□□ -1.69
LSM1P1-201ENST00000438629 MAPK10P53779 464 aa4.5□□□□□ -1.69
LSM1P1-201ENST00000438629 ATXN1P54253 815 aaKnown RBP4.5□□□□□ -1.69
LSM1P1-201ENST00000438629 PMS2P11Q13670 270 aa4.5□□□□□ -1.69
LSM1P1-201ENST00000438629 SLC35G1Q2M3R5 365 aa4.5□□□□□ -1.69
LSM1P1-201ENST00000438629 PTCHD3Q3KNS1 767 aa4.5□□□□□ -1.69
LSM1P1-201ENST00000438629 TBC1D25Q3MII6 688 aa4.5□□□□□ -1.69
LSM1P1-201ENST00000438629 DEPDC1Q5TB30 811 aa4.5□□□□□ -1.69
LSM1P1-201ENST00000438629 HECTD2Q5U5R9 776 aa4.5□□□□□ -1.69
LSM1P1-201ENST00000438629 RRAGBQ5VZM2 374 aa4.5□□□□□ -1.69
LSM1P1-201ENST00000438629 PGBD2Q6P3X8 592 aa4.5□□□□□ -1.69
LSM1P1-201ENST00000438629 FBXO38Q6PIJ6 1188 aa4.5□□□□□ -1.69
LSM1P1-201ENST00000438629 TSHZ1Q6ZSZ6 1077 aa4.5□□□□□ -1.69
LSM1P1-201ENST00000438629 GGNQ86UU5 652 aa4.5□□□□□ -1.69
LSM1P1-201ENST00000438629 SLC44A3Q8N4M1 653 aa4.5□□□□□ -1.69
LSM1P1-201ENST00000438629 DNAJB14Q8TBM8 379 aa4.5□□□□□ -1.69
LSM1P1-201ENST00000438629 ZNF384Q8TF68 577 aa4.5□□□□□ -1.69
LSM1P1-201ENST00000438629 LRRC46Q96FV0 321 aa4.5□□□□□ -1.69
LSM1P1-201ENST00000438629 FAM227BQ96M60 508 aa4.5□□□□□ -1.69
LSM1P1-201ENST00000438629 INO80BQ9C086 356 aaPredicted RBP4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms