RNA–Protein interactions for RNA: ENST00000438518.5

HDAC6-208, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-208ENST00000438518 MMEP08473 750 aa19.44■□□□□ 0.7
HDAC6-208ENST00000438518 CSH1P0DML2 217 aa19.44■□□□□ 0.7
HDAC6-208ENST00000438518 CSH2P0DML3 217 aa19.44■□□□□ 0.7
HDAC6-208ENST00000438518 TNFAIP3P21580 790 aa19.44■□□□□ 0.7
HDAC6-208ENST00000438518 FECHP22830 423 aa19.44■□□□□ 0.7
HDAC6-208ENST00000438518 MAP3K7CLP57077 242 aa19.44■□□□□ 0.7
HDAC6-208ENST00000438518 PDE4CQ08493 712 aa19.44■□□□□ 0.7
HDAC6-208ENST00000438518 ADAM15Q13444 863 aa19.44■□□□□ 0.7
HDAC6-208ENST00000438518 CTC1Q2NKJ3 1217 aa19.44■□□□□ 0.7
HDAC6-208ENST00000438518 TAF3Q5VWG9 929 aa19.44■□□□□ 0.7
HDAC6-208ENST00000438518 WDR59Q6PJI9 974 aa19.44■□□□□ 0.7
HDAC6-208ENST00000438518 Q7L0L9 218 aa19.44■□□□□ 0.7
HDAC6-208ENST00000438518 SCN4BQ8IWT1 228 aa19.44■□□□□ 0.7
HDAC6-208ENST00000438518 SLC20A1Q8WUM9 679 aa19.44■□□□□ 0.7
HDAC6-208ENST00000438518 SECISBP2LQ93073 1101 aaKnown RBP19.44■□□□□ 0.7
HDAC6-208ENST00000438518 PABPC5Q96DU9 382 aaKnown RBP19.44■□□□□ 0.7
HDAC6-208ENST00000438518 SMOQ99835 787 aa19.44■□□□□ 0.7
HDAC6-208ENST00000438518 IGFLR1Q9H665 355 aa19.44■□□□□ 0.7
HDAC6-208ENST00000438518 ARHGAP20Q9P2F6 1191 aa19.44■□□□□ 0.7
HDAC6-208ENST00000438518 GREB1Q4ZG55 1949 aa19.44■□□□□ 0.7
HDAC6-208ENST00000438518 MYO9BQ13459 2157 aa19.44■□□□□ 0.7
HDAC6-208ENST00000438518 XYLBO75191 536 aa19.43■□□□□ 0.7
HDAC6-208ENST00000438518 RTN3O95197 1032 aaPredicted RBP19.43■□□□□ 0.7
HDAC6-208ENST00000438518 CYP1A1P04798 512 aaPredicted RBP19.43■□□□□ 0.7
HDAC6-208ENST00000438518 GZMAP12544 262 aa19.43■□□□□ 0.7
HDAC6-208ENST00000438518 ATF6P18850 670 aa19.43■□□□□ 0.7
HDAC6-208ENST00000438518 ACADSBP45954 432 aa19.43■□□□□ 0.7
HDAC6-208ENST00000438518 CCDC173Q0VFZ6 552 aa19.43■□□□□ 0.7
HDAC6-208ENST00000438518 TWF1Q12792 350 aa19.43■□□□□ 0.7
HDAC6-208ENST00000438518 DENND5BQ6ZUT9 1274 aa19.43■□□□□ 0.7
HDAC6-208ENST00000438518 ZNF571Q7Z3V5 609 aaPredicted RBP19.43■□□□□ 0.7
HDAC6-208ENST00000438518 PIGZQ86VD9 579 aa19.43■□□□□ 0.7
HDAC6-208ENST00000438518 TMTC1Q8IUR5 882 aa19.43■□□□□ 0.7
HDAC6-208ENST00000438518 NUP93Q8N1F7 819 aa19.43■□□□□ 0.7
HDAC6-208ENST00000438518 LEMD2Q8NC56 503 aa19.43■□□□□ 0.7
HDAC6-208ENST00000438518 CCDC112Q8NEF3 446 aa19.43■□□□□ 0.7
HDAC6-208ENST00000438518 ZMIZ2Q8NF64 920 aa19.43■□□□□ 0.7
HDAC6-208ENST00000438518 DEF6Q9H4E7 631 aa19.43■□□□□ 0.7
HDAC6-208ENST00000438518 UXTQ9UBK9 157 aaPredicted RBP19.43■□□□□ 0.7
HDAC6-208ENST00000438518 NRDCO43847 1150 aa19.42■□□□□ 0.7
HDAC6-208ENST00000438518 GLP2RO95838 553 aa19.42■□□□□ 0.7
HDAC6-208ENST00000438518 CALCAP01258 141 aa19.42■□□□□ 0.7
HDAC6-208ENST00000438518 SPATA31D3P0C874 917 aa19.42■□□□□ 0.7
HDAC6-208ENST00000438518 SKILP12757 684 aa19.42■□□□□ 0.7
HDAC6-208ENST00000438518 UNGP13051 313 aaPredicted RBP19.42■□□□□ 0.7
HDAC6-208ENST00000438518 CHRNB2P17787 502 aa19.42■□□□□ 0.7
HDAC6-208ENST00000438518 RPL34P49207 117 aaKnown RBP19.42■□□□□ 0.7
HDAC6-208ENST00000438518 CACNA2D1P54289 1103 aa19.42■□□□□ 0.7
HDAC6-208ENST00000438518 NOMO3P69849 1222 aa19.42■□□□□ 0.7
HDAC6-208ENST00000438518 CENPCQ03188 943 aa19.42■□□□□ 0.7
HDAC6-208ENST00000438518 PDCLQ13371 301 aa19.42■□□□□ 0.7
HDAC6-208ENST00000438518 RAB41Q5JT25 222 aa19.42■□□□□ 0.7
HDAC6-208ENST00000438518 ANKRD54Q6NXT1 300 aa19.42■□□□□ 0.7
HDAC6-208ENST00000438518 LLGL2Q6P1M3 1020 aa19.42■□□□□ 0.7
HDAC6-208ENST00000438518 DENND1BQ6P3S1 775 aa19.42■□□□□ 0.7
HDAC6-208ENST00000438518 SPATA31D4Q6ZUB0 917 aa19.42■□□□□ 0.7
HDAC6-208ENST00000438518 CCDC170Q8IYT3 715 aa19.42■□□□□ 0.7
HDAC6-208ENST00000438518 TTC9BQ8N6N2 239 aa19.42■□□□□ 0.7
HDAC6-208ENST00000438518 UBA3Q8TBC4 463 aa19.42■□□□□ 0.7
HDAC6-208ENST00000438518 IPO4Q8TEX9 1081 aaKnown RBP19.42■□□□□ 0.7
HDAC6-208ENST00000438518 PSMG2Q969U7 264 aa19.42■□□□□ 0.7
HDAC6-208ENST00000438518 TRMT2BQ96GJ1 504 aaKnown RBP19.42■□□□□ 0.7
HDAC6-208ENST00000438518 KCNK16Q96T55 309 aa19.42■□□□□ 0.7
HDAC6-208ENST00000438518 FBXO44Q9H4M3 255 aa19.42■□□□□ 0.7
HDAC6-208ENST00000438518 TNFRSF10BO14763 440 aa19.41■□□□□ 0.7
HDAC6-208ENST00000438518 BEST1O76090 585 aa19.41■□□□□ 0.7
HDAC6-208ENST00000438518 FGF19O95750 216 aa19.41■□□□□ 0.7
HDAC6-208ENST00000438518 TAF12Q16514 161 aa19.41■□□□□ 0.7
HDAC6-208ENST00000438518 DDR2Q16832 855 aa19.41■□□□□ 0.7
HDAC6-208ENST00000438518 CLEC16AQ2KHT3 1053 aa19.41■□□□□ 0.7
HDAC6-208ENST00000438518 CCDC186Q7Z3E2 898 aa19.41■□□□□ 0.7
HDAC6-208ENST00000438518 ZDHHC17Q8IUH5 632 aa19.41■□□□□ 0.7
HDAC6-208ENST00000438518 SCML4Q8N228 414 aa19.41■□□□□ 0.7
HDAC6-208ENST00000438518 VN1R2Q8NFZ6 395 aa19.41■□□□□ 0.7
HDAC6-208ENST00000438518 MYRFLQ96LU7 910 aa19.41■□□□□ 0.7
HDAC6-208ENST00000438518 CCDC42Q96M95 316 aa19.41■□□□□ 0.7
HDAC6-208ENST00000438518 ZNF512Q96ME7 567 aaPredicted RBP19.41■□□□□ 0.7
HDAC6-208ENST00000438518 TTLL2Q9BWV7 592 aa19.41■□□□□ 0.7
HDAC6-208ENST00000438518 PRKD2Q9BZL6 878 aa19.41■□□□□ 0.7
HDAC6-208ENST00000438518 LRRC4Q9HBW1 653 aa19.41■□□□□ 0.7
HDAC6-208ENST00000438518 TMEM30AQ9NV96 361 aa19.41■□□□□ 0.7
HDAC6-208ENST00000438518 SEPT11Q9NVA2 429 aaKnown RBP19.41■□□□□ 0.7
HDAC6-208ENST00000438518 HHLA1C9JL84 531 aa19.4■□□□□ 0.7
HDAC6-208ENST00000438518 GTF2F1P35269 517 aaKnown RBP eCLIP19.4■□□□□ 0.73e-6■■■■□ 25.9
HDAC6-208ENST00000438518 NSFP46459 744 aaKnown RBP19.4■□□□□ 0.7
HDAC6-208ENST00000438518 SLC5A3P53794 718 aa19.4■□□□□ 0.7
HDAC6-208ENST00000438518 ITIH3Q06033 890 aa19.4■□□□□ 0.7
HDAC6-208ENST00000438518 GOLGA8FQ08AF8 430 aa19.4■□□□□ 0.7
HDAC6-208ENST00000438518 GOLGA8DPQ0D2H9 430 aa19.4■□□□□ 0.7
HDAC6-208ENST00000438518 SLC18A3Q16572 532 aa19.4■□□□□ 0.7
HDAC6-208ENST00000438518 TMEM110Q86TL2 294 aa19.4■□□□□ 0.7
HDAC6-208ENST00000438518 PASD1Q8IV76 773 aa19.4■□□□□ 0.7
HDAC6-208ENST00000438518 MICALL1Q8N3F8 863 aa19.4■□□□□ 0.7
HDAC6-208ENST00000438518 C1orf131Q8NDD1 294 aaKnown RBP19.4■□□□□ 0.7
HDAC6-208ENST00000438518 PDZD8Q8NEN9 1154 aa19.4■□□□□ 0.7
HDAC6-208ENST00000438518 SLC30A5Q8TAD4 765 aa19.4■□□□□ 0.7
HDAC6-208ENST00000438518 OVCA2Q8WZ82 227 aa19.4■□□□□ 0.7
HDAC6-208ENST00000438518 PPP1R13BQ96KQ4 1090 aa19.4■□□□□ 0.7
HDAC6-208ENST00000438518 BAG1Q99933 345 aaPredicted RBP19.4■□□□□ 0.7
HDAC6-208ENST00000438518 SLC4A5Q9BY07 1137 aa19.4■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms