RNA–Protein interactions for RNA: ENST00000438066.1

SPEN-202, Transcript of spen family transcriptional repressor, humanhuman

TSL 3

Gene SPEN, Length 1,733 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPEN-202ENST00000438066 FAM84BQ96KN1 310 aaPredicted RBP7.05□□□□□ -1.28
SPEN-202ENST00000438066 C1orf43Q9BWL3 253 aa7.05□□□□□ -1.28
SPEN-202ENST00000438066 ANKRD2Q9GZV1 360 aa7.05□□□□□ -1.28
SPEN-202ENST00000438066 MRPL46Q9H2W6 279 aaKnown RBP7.05□□□□□ -1.28
SPEN-202ENST00000438066 GJD2Q9UKL4 321 aa7.05□□□□□ -1.28
SPEN-202ENST00000438066 PLA2G2DQ9UNK4 145 aa7.05□□□□□ -1.28
SPEN-202ENST00000438066 WDR19Q8NEZ3 1342 aa7.05□□□□□ -1.28
SPEN-202ENST00000438066 NT5C1B-RDH14C9J2C7 533 aa7.04□□□□□ -1.28
SPEN-202ENST00000438066 H0Y858 1186 aa7.04□□□□□ -1.28
SPEN-202ENST00000438066 PLSCR1O15162 318 aa7.04□□□□□ -1.28
SPEN-202ENST00000438066 ARHGAP6O43182 974 aa7.04□□□□□ -1.28
SPEN-202ENST00000438066 WIPF1O43516 503 aa7.04□□□□□ -1.28
SPEN-202ENST00000438066 PFKFB2O60825 505 aa7.04□□□□□ -1.28
SPEN-202ENST00000438066 ZSCAN22P10073 491 aaPredicted RBP7.04□□□□□ -1.28
SPEN-202ENST00000438066 HDCP19113 662 aa7.04□□□□□ -1.28
SPEN-202ENST00000438066 KLRK1P26718 216 aa7.04□□□□□ -1.28
SPEN-202ENST00000438066 PRDX5P30044 214 aa7.04□□□□□ -1.28
SPEN-202ENST00000438066 SOX8P57073 446 aa7.04□□□□□ -1.28
SPEN-202ENST00000438066 HAND2P61296 217 aa7.04□□□□□ -1.28
SPEN-202ENST00000438066 TIGD6Q17RP2 521 aa7.04□□□□□ -1.28
SPEN-202ENST00000438066 GRAMD4Q6IC98 578 aa7.04□□□□□ -1.28
SPEN-202ENST00000438066 FAM180BQ6P0A1 224 aa7.04□□□□□ -1.28
SPEN-202ENST00000438066 RFX8Q6ZV50 586 aa7.04□□□□□ -1.28
SPEN-202ENST00000438066 OTOP2Q7RTS6 562 aa7.04□□□□□ -1.28
SPEN-202ENST00000438066 WFDC3Q8IUB2 231 aa7.04□□□□□ -1.28
SPEN-202ENST00000438066 DTX3Q8N9I9 347 aa7.04□□□□□ -1.28
SPEN-202ENST00000438066 ALG3Q92685 438 aa7.04□□□□□ -1.28
SPEN-202ENST00000438066 CCDC120Q96HB5 630 aa7.04□□□□□ -1.28
SPEN-202ENST00000438066 SNX22Q96L94 193 aa7.04□□□□□ -1.28
SPEN-202ENST00000438066 TRIM54Q9BYV2 358 aa7.04□□□□□ -1.28
SPEN-202ENST00000438066 DLL4Q9NR61 685 aa7.04□□□□□ -1.28
SPEN-202ENST00000438066 TLR9Q9NR96 1032 aa7.04□□□□□ -1.28
SPEN-202ENST00000438066 IFT80Q9P2H3 777 aaPredicted RBP7.04□□□□□ -1.28
SPEN-202ENST00000438066 ZFP69BQ9UJL9 534 aa7.04□□□□□ -1.28
SPEN-202ENST00000438066 MTMR6Q9Y217 621 aa7.04□□□□□ -1.28
SPEN-202ENST00000438066 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP7.04□□□□□ -1.28
SPEN-202ENST00000438066 CDK5RAP2Q96SN8 1893 aa7.04□□□□□ -1.28
SPEN-202ENST00000438066 FSD2A1L4K1 749 aa7.04□□□□□ -1.28
SPEN-202ENST00000438066 AQP12BA6NM10 295 aa7.04□□□□□ -1.28
SPEN-202ENST00000438066 ZNF500O60304 480 aaPredicted RBP7.04□□□□□ -1.28
SPEN-202ENST00000438066 MPOP05164 745 aa7.04□□□□□ -1.28
SPEN-202ENST00000438066 DDCP20711 480 aa7.04□□□□□ -1.28
SPEN-202ENST00000438066 HMGB2P26583 209 aaKnown RBP7.04□□□□□ -1.28
SPEN-202ENST00000438066 SREBF1P36956 1147 aa7.04□□□□□ -1.28
SPEN-202ENST00000438066 ARL4CP56559 192 aa7.04□□□□□ -1.28
SPEN-202ENST00000438066 ERVFRD-1P60508 538 aa7.04□□□□□ -1.28
SPEN-202ENST00000438066 DDR1Q08345 913 aa7.04□□□□□ -1.28
SPEN-202ENST00000438066 GRAPQ13588 217 aa7.04□□□□□ -1.28
SPEN-202ENST00000438066 CAVIN4Q5BKX8 364 aa7.04□□□□□ -1.28
SPEN-202ENST00000438066 GJC2Q5T442 439 aaPredicted RBP7.04□□□□□ -1.28
SPEN-202ENST00000438066 ADGRF1Q5T601 910 aa7.04□□□□□ -1.28
SPEN-202ENST00000438066 ZC3H18Q86VM9 953 aaKnown RBP7.04□□□□□ -1.28
SPEN-202ENST00000438066 TBC1D10CQ8IV04 446 aa7.04□□□□□ -1.28
SPEN-202ENST00000438066 LILRA2Q8N149 483 aa7.04□□□□□ -1.28
SPEN-202ENST00000438066 STPG3Q8N7X2 389 aa7.04□□□□□ -1.28
SPEN-202ENST00000438066 FANCBQ8NB91 859 aa7.04□□□□□ -1.28
SPEN-202ENST00000438066 OR6B3Q8NGW1 331 aa7.04□□□□□ -1.28
SPEN-202ENST00000438066 GRAPLQ8TC17 118 aaPredicted RBP7.04□□□□□ -1.28
SPEN-202ENST00000438066 STON2Q8WXE9 905 aa7.04□□□□□ -1.28
SPEN-202ENST00000438066 MYLIPQ8WY64 445 aa7.04□□□□□ -1.28
SPEN-202ENST00000438066 MAML1Q92585 1016 aa7.04□□□□□ -1.28
SPEN-202ENST00000438066 USP13Q92995 863 aaPredicted RBP7.04□□□□□ -1.28
SPEN-202ENST00000438066 NMD3Q96D46 503 aaKnown RBP7.04□□□□□ -1.28
SPEN-202ENST00000438066 WDR92Q96MX6 357 aa7.04□□□□□ -1.28
SPEN-202ENST00000438066 LRRC2Q9BYS8 371 aa7.04□□□□□ -1.28
SPEN-202ENST00000438066 SAE1Q9UBE0 346 aaPredicted RBP7.04□□□□□ -1.28
SPEN-202ENST00000438066 SRRDQ9UH36 339 aa7.04□□□□□ -1.28
SPEN-202ENST00000438066 AJAP1Q9UKB5 411 aaPredicted RBP7.04□□□□□ -1.28
SPEN-202ENST00000438066 DLEC1Q9Y238 1755 aa7.03□□□□□ -1.28
SPEN-202ENST00000438066 SALL1Q9NSC2 1324 aa7.03□□□□□ -1.28
SPEN-202ENST00000438066 F2RL2O00254 374 aa7.03□□□□□ -1.28
SPEN-202ENST00000438066 POLRMTO00411 1230 aaKnown RBP7.03□□□□□ -1.28
SPEN-202ENST00000438066 ZNF213O14771 459 aa7.03□□□□□ -1.28
SPEN-202ENST00000438066 IRAK2O43187 625 aa7.03□□□□□ -1.28
SPEN-202ENST00000438066 ADCY6O43306 1168 aa7.03□□□□□ -1.28
SPEN-202ENST00000438066 TIMM44O43615 452 aa7.03□□□□□ -1.28
SPEN-202ENST00000438066 FSBPO95073 299 aa7.03□□□□□ -1.28
SPEN-202ENST00000438066 FTH1P19P0C7X4 201 aa7.03□□□□□ -1.28
SPEN-202ENST00000438066 CNTFP26441 200 aa7.03□□□□□ -1.28
SPEN-202ENST00000438066 MCM5P33992 734 aa7.03□□□□□ -1.28
SPEN-202ENST00000438066 SPARCL1Q14515 664 aa7.03□□□□□ -1.28
SPEN-202ENST00000438066 ZNF827Q17R98 1081 aa7.03□□□□□ -1.28
SPEN-202ENST00000438066 PLEKHN1Q494U1 663 aaPredicted RBP7.03□□□□□ -1.28
SPEN-202ENST00000438066 RRAGBQ5VZM2 374 aa7.03□□□□□ -1.28
SPEN-202ENST00000438066 FBXO38Q6PIJ6 1188 aa7.03□□□□□ -1.28
SPEN-202ENST00000438066 C1orf122Q6ZSJ8 110 aa7.03□□□□□ -1.28
SPEN-202ENST00000438066 BEND5Q7L4P6 421 aa7.03□□□□□ -1.28
SPEN-202ENST00000438066 ADGRA1Q86SQ6 560 aa7.03□□□□□ -1.28
SPEN-202ENST00000438066 SLC51AQ86UW1 340 aa7.03□□□□□ -1.28
SPEN-202ENST00000438066 BCL6BQ8N143 479 aaPredicted RBP7.03□□□□□ -1.28
SPEN-202ENST00000438066 GALNT15Q8N3T1 639 aa7.03□□□□□ -1.28
SPEN-202ENST00000438066 LCORLQ8N3X6 602 aa7.03□□□□□ -1.28
SPEN-202ENST00000438066 PIK3C3Q8NEB9 887 aa7.03□□□□□ -1.28
SPEN-202ENST00000438066 SMARCC2Q8TAQ2 1214 aa7.03□□□□□ -1.28
SPEN-202ENST00000438066 ZNF384Q8TF68 577 aa7.03□□□□□ -1.28
SPEN-202ENST00000438066 KBTBD7Q8WVZ9 684 aa7.03□□□□□ -1.28
SPEN-202ENST00000438066 CYFIP2Q96F07 1278 aa7.03□□□□□ -1.28
SPEN-202ENST00000438066 LRRC46Q96FV0 321 aa7.03□□□□□ -1.28
SPEN-202ENST00000438066 ZNF274Q96GC6 653 aaPredicted RBP7.03□□□□□ -1.28
SPEN-202ENST00000438066 SYT3Q9BQG1 590 aa7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms