RNA–Protein interactions for RNA: ENST00000436654.1

CTDSPL-205, Transcript of CTD small phosphatase like, humanhuman

TSL 3

Gene CTDSPL, Length 804 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-205ENST00000436654 TICRRQ7Z2Z1 1910 aa9.49□□□□□ -0.89
CTDSPL-205ENST00000436654 PVALEFA0A1B0GWK0 134 aa9.49□□□□□ -0.89
CTDSPL-205ENST00000436654 DCDC2BA2VCK2 349 aa9.49□□□□□ -0.89
CTDSPL-205ENST00000436654 A8MXQ7 604 aa9.49□□□□□ -0.89
CTDSPL-205ENST00000436654 PRR5-ARHGAP8B1AHC4 643 aa9.49□□□□□ -0.89
CTDSPL-205ENST00000436654 CLDN5O00501 218 aa9.49□□□□□ -0.89
CTDSPL-205ENST00000436654 SCAMP3O14828 347 aaKnown RBP9.49□□□□□ -0.89
CTDSPL-205ENST00000436654 TRIM66O15016 1216 aa9.49□□□□□ -0.89
CTDSPL-205ENST00000436654 PHACTR2O75167 634 aa9.49□□□□□ -0.89
CTDSPL-205ENST00000436654 TACC1O75410 805 aa9.49□□□□□ -0.89
CTDSPL-205ENST00000436654 ABL1P00519 1130 aa9.49□□□□□ -0.89
CTDSPL-205ENST00000436654 PTPN1P18031 435 aaKnown RBP9.49□□□□□ -0.89
CTDSPL-205ENST00000436654 RAP1GAPP47736 663 aa9.49□□□□□ -0.89
CTDSPL-205ENST00000436654 ATXN1P54253 815 aaKnown RBP9.49□□□□□ -0.89
CTDSPL-205ENST00000436654 CDH8P55286 799 aa9.49□□□□□ -0.89
CTDSPL-205ENST00000436654 SNRPFP62306 86 aaKnown RBP9.49□□□□□ -0.89
CTDSPL-205ENST00000436654 ARHGAP8P85298 464 aa9.49□□□□□ -0.89
CTDSPL-205ENST00000436654 ZXDBP98169 803 aa9.49□□□□□ -0.89
CTDSPL-205ENST00000436654 AMPD2Q01433 879 aa9.49□□□□□ -0.89
CTDSPL-205ENST00000436654 BIRC3Q13489 604 aa9.49□□□□□ -0.89
CTDSPL-205ENST00000436654 KNOP1Q1ED39 458 aaKnown RBP9.49□□□□□ -0.89
CTDSPL-205ENST00000436654 BMT2Q1RMZ1 405 aa9.49□□□□□ -0.89
CTDSPL-205ENST00000436654 EML3Q32P44 896 aa9.49□□□□□ -0.89
CTDSPL-205ENST00000436654 SCARA5Q6ZMJ2 495 aa9.49□□□□□ -0.89
CTDSPL-205ENST00000436654 DENND5BQ6ZUT9 1274 aa9.49□□□□□ -0.89
CTDSPL-205ENST00000436654 WDR5BQ86VZ2 330 aa9.49□□□□□ -0.89
CTDSPL-205ENST00000436654 FAM160A2Q8N612 972 aaPredicted RBP9.49□□□□□ -0.89
CTDSPL-205ENST00000436654 PLEKHO2Q8TD55 490 aa9.49□□□□□ -0.89
CTDSPL-205ENST00000436654 ATP2A3Q93084 1043 aa9.49□□□□□ -0.89
CTDSPL-205ENST00000436654 CHAMP1Q96JM3 812 aa9.49□□□□□ -0.89
CTDSPL-205ENST00000436654 B3GNT5Q9BYG0 378 aa9.49□□□□□ -0.89
CTDSPL-205ENST00000436654 ZNF518BQ9C0D4 1074 aa9.49□□□□□ -0.89
CTDSPL-205ENST00000436654 XYLT2Q9H1B5 865 aa9.49□□□□□ -0.89
CTDSPL-205ENST00000436654 SMYD3Q9H7B4 428 aa9.49□□□□□ -0.89
CTDSPL-205ENST00000436654 SEMA4GQ9NTN9 838 aa9.49□□□□□ -0.89
CTDSPL-205ENST00000436654 EXOC1Q9NV70 894 aa9.49□□□□□ -0.89
CTDSPL-205ENST00000436654 TMEM30AQ9NV96 361 aa9.49□□□□□ -0.89
CTDSPL-205ENST00000436654 SMPD4Q9NXE4 827 aa9.49□□□□□ -0.89
CTDSPL-205ENST00000436654 TRPM5Q9NZQ8 1165 aa9.49□□□□□ -0.89
CTDSPL-205ENST00000436654 ZNF840PA6NDX5 716 aa9.48□□□□□ -0.89
CTDSPL-205ENST00000436654 LRRIQ3A6PVS8 624 aaPredicted RBP9.48□□□□□ -0.89
CTDSPL-205ENST00000436654 AXIN1O15169 862 aa9.48□□□□□ -0.89
CTDSPL-205ENST00000436654 ACTN4O43707 911 aaKnown RBP9.48□□□□□ -0.89
CTDSPL-205ENST00000436654 KLRC4O43908 158 aa9.48□□□□□ -0.89
CTDSPL-205ENST00000436654 ATG13O75143 517 aa9.48□□□□□ -0.89
CTDSPL-205ENST00000436654 SLFN14P0C7P3 912 aa9.48□□□□□ -0.89
CTDSPL-205ENST00000436654 DRD1P21728 446 aa9.48□□□□□ -0.89
CTDSPL-205ENST00000436654 SDHBP21912 280 aa9.48□□□□□ -0.89
CTDSPL-205ENST00000436654 HOXA6P31267 233 aa9.48□□□□□ -0.89
CTDSPL-205ENST00000436654 CNR2P34972 360 aa9.48□□□□□ -0.89
CTDSPL-205ENST00000436654 STK4Q13043 487 aa9.48□□□□□ -0.89
CTDSPL-205ENST00000436654 PSMD2Q13200 908 aa9.48□□□□□ -0.89
CTDSPL-205ENST00000436654 CCDC6Q16204 474 aa9.48□□□□□ -0.89
CTDSPL-205ENST00000436654 ST3GAL2Q16842 350 aa9.48□□□□□ -0.89
CTDSPL-205ENST00000436654 TDRD10Q5VZ19 366 aaKnown RBP9.48□□□□□ -0.89
CTDSPL-205ENST00000436654 C12orf56Q8IXR9 622 aa9.48□□□□□ -0.89
CTDSPL-205ENST00000436654 B3GALNT2Q8NCR0 500 aa9.48□□□□□ -0.89
CTDSPL-205ENST00000436654 RPLP0P6Q8NHW5 317 aa9.48□□□□□ -0.89
CTDSPL-205ENST00000436654 EZH1Q92800 747 aaPredicted RBP9.48□□□□□ -0.89
CTDSPL-205ENST00000436654 CD101Q93033 1021 aa9.48□□□□□ -0.89
CTDSPL-205ENST00000436654 SYAP1Q96A49 352 aaPredicted RBP9.48□□□□□ -0.89
CTDSPL-205ENST00000436654 PAGE5Q96GU1 130 aa9.48□□□□□ -0.89
CTDSPL-205ENST00000436654 C8orf48Q96LL4 319 aa9.48□□□□□ -0.89
CTDSPL-205ENST00000436654 HHIPQ96QV1 700 aa9.48□□□□□ -0.89
CTDSPL-205ENST00000436654 TTLL2Q9BWV7 592 aa9.48□□□□□ -0.89
CTDSPL-205ENST00000436654 CGNQ9P2M7 1197 aaKnown RBP9.48□□□□□ -0.89
CTDSPL-205ENST00000436654 RCOR1Q9UKL0 485 aa9.48□□□□□ -0.89
CTDSPL-205ENST00000436654 CFAP45Q9UL16 551 aa9.48□□□□□ -0.89
CTDSPL-205ENST00000436654 ARHGAP26Q9UNA1 814 aa9.48□□□□□ -0.89
CTDSPL-205ENST00000436654 CPQQ9Y646 472 aa9.48□□□□□ -0.89
CTDSPL-205ENST00000436654 EP300Q09472 2414 aaPredicted RBP9.48□□□□□ -0.89
CTDSPL-205ENST00000436654 ACACBO00763 2458 aa9.48□□□□□ -0.89
CTDSPL-205ENST00000436654 SCN1AP35498 2009 aa9.48□□□□□ -0.89
CTDSPL-205ENST00000436654 CACNA1IQ9P0X4 2223 aa9.47□□□□□ -0.89
CTDSPL-205ENST00000436654 LOC105378220A0A1B0GUY1 285 aaPredicted RBP9.47□□□□□ -0.89
CTDSPL-205ENST00000436654 A0A1B0GVL5 298 aa9.47□□□□□ -0.89
CTDSPL-205ENST00000436654 LEFTY2O00292 366 aa9.47□□□□□ -0.89
CTDSPL-205ENST00000436654 GDF9O60383 454 aa9.47□□□□□ -0.89
CTDSPL-205ENST00000436654 LRP3O75074 770 aa9.47□□□□□ -0.89
CTDSPL-205ENST00000436654 RPP40O75818 363 aaKnown RBP9.47□□□□□ -0.89
CTDSPL-205ENST00000436654 VNN1O95497 513 aa9.47□□□□□ -0.89
CTDSPL-205ENST00000436654 NFATC1O95644 943 aa9.47□□□□□ -0.89
CTDSPL-205ENST00000436654 STAU1O95793 577 aaKnown RBP9.47□□□□□ -0.89
CTDSPL-205ENST00000436654 CCDC192P0DO97 292 aa9.47□□□□□ -0.89
CTDSPL-205ENST00000436654 PFKFB1P16118 471 aa9.47□□□□□ -0.89
CTDSPL-205ENST00000436654 ATICP31939 592 aa9.47□□□□□ -0.89
CTDSPL-205ENST00000436654 PDE6CP51160 858 aa9.47□□□□□ -0.89
CTDSPL-205ENST00000436654 SEC13P55735 322 aa9.47□□□□□ -0.89
CTDSPL-205ENST00000436654 NOP14P78316 857 aaKnown RBP9.47□□□□□ -0.89
CTDSPL-205ENST00000436654 TAF10Q12962 218 aa9.47□□□□□ -0.89
CTDSPL-205ENST00000436654 NR1H3Q13133 447 aa9.47□□□□□ -0.89
CTDSPL-205ENST00000436654 ORC1Q13415 861 aa9.47□□□□□ -0.89
CTDSPL-205ENST00000436654 NCOA4Q13772 614 aa9.47□□□□□ -0.89
CTDSPL-205ENST00000436654 CSRP2Q16527 193 aa9.47□□□□□ -0.89
CTDSPL-205ENST00000436654 ZNF699Q32M78 642 aa9.47□□□□□ -0.89
CTDSPL-205ENST00000436654 KMT5BQ4FZB7 885 aa9.47□□□□□ -0.89
CTDSPL-205ENST00000436654 ATL3Q6DD88 541 aa9.47□□□□□ -0.89
CTDSPL-205ENST00000436654 PRR23CQ6ZRP0 262 aa9.47□□□□□ -0.89
CTDSPL-205ENST00000436654 FILIP1Q7Z7B0 1213 aa9.47□□□□□ -0.89
CTDSPL-205ENST00000436654 KBTBD6Q86V97 674 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms