RNA–Protein interactions for RNA: ENST00000436461.6

CALD1-209, Transcript of caldesmon 1, humanhuman

TSL 5

Gene CALD1, Length 1,614 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-209ENST00000436461 CPA5Q8WXQ8 436 aa17.75■□□□□ 0.43
CALD1-209ENST00000436461 PPP2R3CQ969Q6 453 aa17.75■□□□□ 0.43
CALD1-209ENST00000436461 PANX2Q96RD6 677 aa17.75■□□□□ 0.43
CALD1-209ENST00000436461 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP17.75■□□□□ 0.43
CALD1-209ENST00000436461 DMAP1Q9NPF5 467 aaPredicted RBP17.75■□□□□ 0.43
CALD1-209ENST00000436461 TAS2R14Q9NYV8 317 aa17.75■□□□□ 0.43
CALD1-209ENST00000436461 TJP2Q9UDY2 1190 aa17.75■□□□□ 0.43
CALD1-209ENST00000436461 ZNF638Q14966 1978 aaKnown RBP17.74■□□□□ 0.43
CALD1-209ENST00000436461 POU3F3P20264 500 aaPredicted RBP17.74■□□□□ 0.43
CALD1-209ENST00000436461 MAGEA11P43364 429 aa17.74■□□□□ 0.43
CALD1-209ENST00000436461 CCDC85BQ15834 202 aaPredicted RBP17.74■□□□□ 0.43
CALD1-209ENST00000436461 C2CD6Q53TS8 623 aa17.74■□□□□ 0.43
CALD1-209ENST00000436461 LIN9Q5TKA1 542 aa17.74■□□□□ 0.43
CALD1-209ENST00000436461 NAA35Q5VZE5 725 aa17.74■□□□□ 0.43
CALD1-209ENST00000436461 PMF1Q6P1K2 205 aa17.74■□□□□ 0.43
CALD1-209ENST00000436461 VSTM1Q6UX27 236 aa17.74■□□□□ 0.43
CALD1-209ENST00000436461 PIGZQ86VD9 579 aa17.74■□□□□ 0.43
CALD1-209ENST00000436461 SLC30A5Q8TAD4 765 aa17.74■□□□□ 0.43
CALD1-209ENST00000436461 SLC35F5Q8WV83 523 aa17.74■□□□□ 0.43
CALD1-209ENST00000436461 NHEJ1Q9H9Q4 299 aaPredicted RBP17.74■□□□□ 0.43
CALD1-209ENST00000436461 CSNK1G1Q9HCP0 422 aa17.74■□□□□ 0.43
CALD1-209ENST00000436461 ADAMTS1Q9UHI8 967 aa17.74■□□□□ 0.43
CALD1-209ENST00000436461 MYO16Q9Y6X6 1858 aa17.74■□□□□ 0.43
CALD1-209ENST00000436461 SOWAHDA6NJG2 315 aa17.73■□□□□ 0.43
CALD1-209ENST00000436461 SPDYE4A6NLX3 237 aa17.73■□□□□ 0.43
CALD1-209ENST00000436461 HHLA1C9JL84 531 aa17.73■□□□□ 0.43
CALD1-209ENST00000436461 CCL16O15467 120 aa17.73■□□□□ 0.43
CALD1-209ENST00000436461 TUFMP49411 452 aaKnown RBP17.73■□□□□ 0.43
CALD1-209ENST00000436461 GSDMDP57764 484 aa17.73■□□□□ 0.43
CALD1-209ENST00000436461 NOMO3P69849 1222 aa17.73■□□□□ 0.43
CALD1-209ENST00000436461 SMYD5Q6GMV2 418 aa17.73■□□□□ 0.43
CALD1-209ENST00000436461 EP400NLQ6ZTU2 488 aa17.73■□□□□ 0.43
CALD1-209ENST00000436461 TMEM139Q8IV31 216 aa17.73■□□□□ 0.43
CALD1-209ENST00000436461 PPM1EQ8WY54 764 aa17.73■□□□□ 0.43
CALD1-209ENST00000436461 CDCA3Q99618 268 aaPredicted RBP17.73■□□□□ 0.43
CALD1-209ENST00000436461 APOL5Q9BWW9 433 aa17.73■□□□□ 0.43
CALD1-209ENST00000436461 ST7Q9NRC1 585 aa17.73■□□□□ 0.43
CALD1-209ENST00000436461 MTMR10Q9NXD2 777 aa17.73■□□□□ 0.43
CALD1-209ENST00000436461 BZW2Q9Y6E2 419 aaKnown RBP17.73■□□□□ 0.43
CALD1-209ENST00000436461 C2orf16Q68DN1 1984 aa17.73■□□□□ 0.43
CALD1-209ENST00000436461 A0A087X0T9 212 aa17.72■□□□□ 0.43
CALD1-209ENST00000436461 XPO1O14980 1071 aaKnown RBP17.72■□□□□ 0.43
CALD1-209ENST00000436461 TRIM66O15016 1216 aa17.72■□□□□ 0.43
CALD1-209ENST00000436461 GABBR2O75899 941 aa17.72■□□□□ 0.43
CALD1-209ENST00000436461 CYP1A1P04798 512 aaPredicted RBP17.72■□□□□ 0.43
CALD1-209ENST00000436461 FAM228BP0C875 321 aa17.72■□□□□ 0.43
CALD1-209ENST00000436461 FOSL2P15408 326 aa17.72■□□□□ 0.43
CALD1-209ENST00000436461 ANXA13P27216 316 aa17.72■□□□□ 0.43
CALD1-209ENST00000436461 ALDH1A3P47895 512 aa17.72■□□□□ 0.43
CALD1-209ENST00000436461 USP46P62068 366 aa17.72■□□□□ 0.43
CALD1-209ENST00000436461 GFPT1Q06210 699 aaPredicted RBP17.72■□□□□ 0.43
CALD1-209ENST00000436461 DLX2Q07687 328 aaPredicted RBP17.72■□□□□ 0.43
CALD1-209ENST00000436461 MTF1Q14872 753 aa17.72■□□□□ 0.43
CALD1-209ENST00000436461 PPM1LQ5SGD2 360 aa17.72■□□□□ 0.43
CALD1-209ENST00000436461 EFHBQ8N7U6 833 aa17.72■□□□□ 0.43
CALD1-209ENST00000436461 SCAMP5Q8TAC9 235 aa17.72■□□□□ 0.43
CALD1-209ENST00000436461 LHX5Q9H2C1 402 aa17.72■□□□□ 0.43
CALD1-209ENST00000436461 DEF6Q9H4E7 631 aa17.72■□□□□ 0.43
CALD1-209ENST00000436461 SPTLC3Q9NUV7 552 aa17.72■□□□□ 0.43
CALD1-209ENST00000436461 CEP83Q9Y592 693 aa17.72■□□□□ 0.43
CALD1-209ENST00000436461 ZMYND10O75800 440 aa17.72■□□□□ 0.43
CALD1-209ENST00000436461 LRG1P02750 347 aa17.72■□□□□ 0.43
CALD1-209ENST00000436461 PTMAP06454 111 aaKnown RBP17.72■□□□□ 0.43
CALD1-209ENST00000436461 SETSIPP0DME0 302 aa17.72■□□□□ 0.43
CALD1-209ENST00000436461 UNGP13051 313 aaPredicted RBP17.72■□□□□ 0.43
CALD1-209ENST00000436461 LCP1P13796 627 aa17.72■□□□□ 0.43
CALD1-209ENST00000436461 PLA2G4AP47712 749 aa17.72■□□□□ 0.43
CALD1-209ENST00000436461 SLC5A3P53794 718 aa17.72■□□□□ 0.43
CALD1-209ENST00000436461 SLC8A3P57103 927 aa17.72■□□□□ 0.43
CALD1-209ENST00000436461 CCDC173Q0VFZ6 552 aa17.72■□□□□ 0.43
CALD1-209ENST00000436461 PDCLQ13371 301 aa17.72■□□□□ 0.43
CALD1-209ENST00000436461 CLEC16AQ2KHT3 1053 aa17.72■□□□□ 0.43
CALD1-209ENST00000436461 ASTE1Q2TB18 679 aaPredicted RBP17.72■□□□□ 0.43
CALD1-209ENST00000436461 PTPN20Q4JDL3 420 aa17.72■□□□□ 0.43
CALD1-209ENST00000436461 CCDC149Q6ZUS6 474 aa17.72■□□□□ 0.43
CALD1-209ENST00000436461 TMEM35BQ8NCS4 154 aa17.72■□□□□ 0.43
CALD1-209ENST00000436461 C8orf48Q96LL4 319 aa17.72■□□□□ 0.43
CALD1-209ENST00000436461 CPXM1Q96SM3 734 aa17.72■□□□□ 0.43
CALD1-209ENST00000436461 BAG1Q99933 345 aaPredicted RBP17.72■□□□□ 0.43
CALD1-209ENST00000436461 PLEKHA4Q9H4M7 779 aa17.72■□□□□ 0.43
CALD1-209ENST00000436461 CLDND1Q9NY35 253 aa17.72■□□□□ 0.43
CALD1-209ENST00000436461 HSFX1Q9UBD0 423 aa17.72■□□□□ 0.43
CALD1-209ENST00000436461 CDH22Q9UJ99 828 aa17.72■□□□□ 0.43
CALD1-209ENST00000436461 MAGED2Q9UNF1 606 aaPredicted RBP17.72■□□□□ 0.43
CALD1-209ENST00000436461 TNFRSF10BO14763 440 aa17.71■□□□□ 0.43
CALD1-209ENST00000436461 TBX10O75333 385 aa17.71■□□□□ 0.43
CALD1-209ENST00000436461 FECHP22830 423 aa17.71■□□□□ 0.43
CALD1-209ENST00000436461 CDH5P33151 784 aaPredicted RBP17.71■□□□□ 0.43
CALD1-209ENST00000436461 KIF11P52732 1056 aa17.71■□□□□ 0.43
CALD1-209ENST00000436461 RPL10AP62906 217 aaKnown RBP17.71■□□□□ 0.43
CALD1-209ENST00000436461 CDK17Q00537 523 aa17.71■□□□□ 0.43
CALD1-209ENST00000436461 ADIGQ0VDE8 80 aa17.71■□□□□ 0.43
CALD1-209ENST00000436461 MAPK8IP2Q13387 824 aaPredicted RBP17.71■□□□□ 0.43
CALD1-209ENST00000436461 TMC5Q6UXY8 1006 aa17.71■□□□□ 0.43
CALD1-209ENST00000436461 CYP26C1Q6V0L0 522 aa17.71■□□□□ 0.43
CALD1-209ENST00000436461 PHLDB2Q86SQ0 1253 aa17.71■□□□□ 0.43
CALD1-209ENST00000436461 LRRC8AQ8IWT6 810 aa17.71■□□□□ 0.43
CALD1-209ENST00000436461 NDRG1Q92597 394 aaKnown RBP17.71■□□□□ 0.43
CALD1-209ENST00000436461 CCDC42Q96M95 316 aa17.71■□□□□ 0.43
CALD1-209ENST00000436461 ZNF830Q96NB3 372 aaPredicted RBP17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms