RNA–Protein interactions for RNA: ENST00000434735.6

UBE3B-203, Transcript of ubiquitin protein ligase E3B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE3B, Length 5,620 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-203ENST00000434735 TBC1D3CQ6IPX1 549 aa12.65□□□□□ -0.39
UBE3B-203ENST00000434735 TBC1D3Q8IZP1 549 aaPredicted RBP12.65□□□□□ -0.39
UBE3B-203ENST00000434735 MKNK1Q9BUB5 465 aa12.65□□□□□ -0.39
UBE3B-203ENST00000434735 CDV3Q9UKY7 258 aaKnown RBP12.65□□□□□ -0.39
UBE3B-203ENST00000434735 ITSN1Q15811 1721 aa12.64□□□□□ -0.39
UBE3B-203ENST00000434735 MAML3Q96JK9 1138 aa12.64□□□□□ -0.39
UBE3B-203ENST00000434735 ELOVL4Q9GZR5 314 aa12.64□□□□□ -0.39
UBE3B-203ENST00000434735 BTBD7Q9P203 1132 aa12.64□□□□□ -0.39
UBE3B-203ENST00000434735 LNPEPQ9UIQ6 1025 aa12.64□□□□□ -0.39
UBE3B-203ENST00000434735 TDRKHQ9Y2W6 561 aaKnown RBP12.64□□□□□ -0.39
UBE3B-203ENST00000434735 GRK3P35626 688 aa12.64□□□□□ -0.39
UBE3B-203ENST00000434735 FBXO46Q6PJ61 603 aaPredicted RBP12.64□□□□□ -0.39
UBE3B-203ENST00000434735 RASAL3Q86YV0 1011 aa12.64□□□□□ -0.39
UBE3B-203ENST00000434735 CCDC33Q8N5R6 958 aa12.64□□□□□ -0.39
UBE3B-203ENST00000434735 ARHGAP9Q9BRR9 750 aa12.64□□□□□ -0.39
UBE3B-203ENST00000434735 ZCWPW1Q9H0M4 648 aa12.64□□□□□ -0.39
UBE3B-203ENST00000434735 RNPEPQ9H4A4 650 aa12.64□□□□□ -0.39
UBE3B-203ENST00000434735 ARHGEF38Q9NXL2 777 aa12.64□□□□□ -0.39
UBE3B-203ENST00000434735 KPNA7A9QM74 516 aa12.64□□□□□ -0.39
UBE3B-203ENST00000434735 H2AFYO75367 372 aaKnown RBP12.64□□□□□ -0.39
UBE3B-203ENST00000434735 KRT37O76014 449 aa12.64□□□□□ -0.39
UBE3B-203ENST00000434735 OR1E1P30953 314 aa12.64□□□□□ -0.39
UBE3B-203ENST00000434735 ATP5C1P36542 298 aaKnown RBP12.64□□□□□ -0.39
UBE3B-203ENST00000434735 CRYBB1P53674 252 aaPredicted RBP12.64□□□□□ -0.39
UBE3B-203ENST00000434735 GEMIN4P57678 1058 aaKnown RBP12.64□□□□□ -0.39
UBE3B-203ENST00000434735 ANTXR2P58335 489 aa12.64□□□□□ -0.39
UBE3B-203ENST00000434735 TRIM60Q495X7 471 aa12.64□□□□□ -0.39
UBE3B-203ENST00000434735 ZNF507Q8TCN5 953 aa12.64□□□□□ -0.39
UBE3B-203ENST00000434735 PBKQ96KB5 322 aa12.64□□□□□ -0.39
UBE3B-203ENST00000434735 CD274Q9NZQ7 290 aa12.64□□□□□ -0.39
UBE3B-203ENST00000434735 FAM47E-STBD1D6RA91 191 aa12.64□□□□□ -0.39
UBE3B-203ENST00000434735 ADH1CP00326 375 aa12.64□□□□□ -0.39
UBE3B-203ENST00000434735 MMP3P08254 477 aa12.64□□□□□ -0.39
UBE3B-203ENST00000434735 CSH1P0DML2 217 aa12.64□□□□□ -0.39
UBE3B-203ENST00000434735 CSH2P0DML3 217 aa12.64□□□□□ -0.39
UBE3B-203ENST00000434735 GARTP22102 1010 aa12.64□□□□□ -0.39
UBE3B-203ENST00000434735 ACLYP53396 1101 aa12.64□□□□□ -0.39
UBE3B-203ENST00000434735 MYL6P60660 151 aa12.64□□□□□ -0.39
UBE3B-203ENST00000434735 PDK1Q15118 436 aa12.64□□□□□ -0.39
UBE3B-203ENST00000434735 TARBP2Q15633 366 aaKnown RBP12.64□□□□□ -0.39
UBE3B-203ENST00000434735 CHRDL2Q6WN34 429 aa12.64□□□□□ -0.39
UBE3B-203ENST00000434735 SLC35F6Q8N357 371 aa12.64□□□□□ -0.39
UBE3B-203ENST00000434735 USP38Q8NB14 1042 aa12.64□□□□□ -0.39
UBE3B-203ENST00000434735 GPR152Q8TDT2 470 aa12.64□□□□□ -0.39
UBE3B-203ENST00000434735 PTPRN2Q92932 1015 aa12.64□□□□□ -0.39
UBE3B-203ENST00000434735 OTUB1Q96FW1 271 aaPredicted RBP12.64□□□□□ -0.39
UBE3B-203ENST00000434735 POP1Q99575 1024 aaKnown RBP12.64□□□□□ -0.39
UBE3B-203ENST00000434735 TTPALQ9BTX7 342 aa12.64□□□□□ -0.39
UBE3B-203ENST00000434735 TUBB6Q9BUF5 446 aa12.64□□□□□ -0.39
UBE3B-203ENST00000434735 CHCHD3Q9NX63 227 aaKnown RBP12.64□□□□□ -0.39
UBE3B-203ENST00000434735 ITGA11Q9UKX5 1188 aa12.64□□□□□ -0.39
UBE3B-203ENST00000434735 SOWAHDA6NJG2 315 aa12.63□□□□□ -0.39
UBE3B-203ENST00000434735 C1QTNF3-AMACRE9PGA6 284 aa12.63□□□□□ -0.39
UBE3B-203ENST00000434735 ACSL3O95573 720 aa12.63□□□□□ -0.39
UBE3B-203ENST00000434735 MUTP22033 750 aa12.63□□□□□ -0.39
UBE3B-203ENST00000434735 HIST2H2ACQ16777 129 aaPredicted RBP12.63□□□□□ -0.39
UBE3B-203ENST00000434735 HECTD3Q5T447 861 aa12.63□□□□□ -0.39
UBE3B-203ENST00000434735 SDHAF4Q5VUM1 108 aa12.63□□□□□ -0.39
UBE3B-203ENST00000434735 ALS2CLQ60I27 953 aa12.63□□□□□ -0.39
UBE3B-203ENST00000434735 HIST2H2AA3Q6FI13 130 aa12.63□□□□□ -0.39
UBE3B-203ENST00000434735 KRT80Q6KB66 452 aa12.63□□□□□ -0.39
UBE3B-203ENST00000434735 MORC4Q8TE76 937 aa12.63□□□□□ -0.39
UBE3B-203ENST00000434735 NRBF2Q96F24 287 aa12.63□□□□□ -0.39
UBE3B-203ENST00000434735 UROC1Q96N76 676 aa12.63□□□□□ -0.39
UBE3B-203ENST00000434735 KDM4CQ9H3R0 1056 aa12.63□□□□□ -0.39
UBE3B-203ENST00000434735 LIMA1Q9UHB6 759 aaKnown RBP12.63□□□□□ -0.39
UBE3B-203ENST00000434735 PHF20L1A8MW92 1017 aa12.63□□□□□ -0.39
UBE3B-203ENST00000434735 CENPCQ03188 943 aa12.63□□□□□ -0.39
UBE3B-203ENST00000434735 DHX9Q08211 1270 aaKnown RBP12.63□□□□□ -0.39
UBE3B-203ENST00000434735 XRCC4Q13426 336 aa12.63□□□□□ -0.39
UBE3B-203ENST00000434735 CUL2Q13617 745 aa12.63□□□□□ -0.39
UBE3B-203ENST00000434735 LAMB3Q13751 1172 aa12.63□□□□□ -0.39
UBE3B-203ENST00000434735 RASIP1Q5U651 963 aa12.63□□□□□ -0.39
UBE3B-203ENST00000434735 LRRC37BQ96QE4 947 aa12.63□□□□□ -0.39
UBE3B-203ENST00000434735 MRIQ9BWK5 157 aa12.63□□□□□ -0.39
UBE3B-203ENST00000434735 CAPN7Q9Y6W3 813 aa12.63□□□□□ -0.39
UBE3B-203ENST00000434735 LACTBL1A8MY62 500 aa12.63□□□□□ -0.39
UBE3B-203ENST00000434735 E2F6O75461 281 aa12.63□□□□□ -0.39
UBE3B-203ENST00000434735 FBXO21O94952 628 aa12.63□□□□□ -0.39
UBE3B-203ENST00000434735 F9P00740 461 aa12.63□□□□□ -0.39
UBE3B-203ENST00000434735 CCND3P30281 292 aaPredicted RBP12.63□□□□□ -0.39
UBE3B-203ENST00000434735 CASP4P49662 377 aa12.63□□□□□ -0.39
UBE3B-203ENST00000434735 TROAPQ12815 778 aa12.63□□□□□ -0.39
UBE3B-203ENST00000434735 NT5DC3Q86UY8 548 aa12.63□□□□□ -0.39
UBE3B-203ENST00000434735 NRSN1Q8IZ57 195 aa12.63□□□□□ -0.39
UBE3B-203ENST00000434735 CCDC197Q8NCU1 140 aa12.63□□□□□ -0.39
UBE3B-203ENST00000434735 HPS4Q9NQG7 708 aa12.63□□□□□ -0.39
UBE3B-203ENST00000434735 CAMTA1Q9Y6Y1 1673 aa12.63□□□□□ -0.39
UBE3B-203ENST00000434735 PSMD3O43242 534 aa12.63□□□□□ -0.39
UBE3B-203ENST00000434735 VDRP11473 427 aa12.63□□□□□ -0.39
UBE3B-203ENST00000434735 DGKEP52429 567 aa12.63□□□□□ -0.39
UBE3B-203ENST00000434735 COPS2P61201 443 aa12.63□□□□□ -0.39
UBE3B-203ENST00000434735 ZKSCAN8Q15776 578 aaPredicted RBP12.63□□□□□ -0.39
UBE3B-203ENST00000434735 SGO1Q5FBB7 561 aa12.63□□□□□ -0.39
UBE3B-203ENST00000434735 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.63□□□□□ -0.39
UBE3B-203ENST00000434735 CAMKK1Q8N5S9 505 aa12.63□□□□□ -0.39
UBE3B-203ENST00000434735 ZNF614Q8N883 585 aa12.63□□□□□ -0.39
UBE3B-203ENST00000434735 DBF4BQ8NFT6 615 aa12.63□□□□□ -0.39
UBE3B-203ENST00000434735 JADE3Q92613 823 aa12.63□□□□□ -0.39
UBE3B-203ENST00000434735 OTULINQ96BN8 352 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms