RNA–Protein interactions for RNA: ENST00000432954.1

CCDC171-202, Transcript of coiled-coil domain containing 171, humanhuman

TSL 2

Gene CCDC171, Length 2,181 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-202ENST00000432954 USP37Q86T82 979 aa11.37□□□□□ -0.59
CCDC171-202ENST00000432954 FBXO11Q86XK2 927 aa11.37□□□□□ -0.59
CCDC171-202ENST00000432954 PDSS2Q86YH6 399 aa11.37□□□□□ -0.59
CCDC171-202ENST00000432954 OR6S1Q8NH40 331 aa11.37□□□□□ -0.59
CCDC171-202ENST00000432954 FNIP1Q8TF40 1166 aa11.37□□□□□ -0.59
CCDC171-202ENST00000432954 ART5Q96L15 291 aa11.37□□□□□ -0.59
CCDC171-202ENST00000432954 MROQ9BYG7 248 aa11.37□□□□□ -0.59
CCDC171-202ENST00000432954 ADAM7Q9H2U9 754 aa11.37□□□□□ -0.59
CCDC171-202ENST00000432954 EBF3Q9H4W6 596 aa11.37□□□□□ -0.59
CCDC171-202ENST00000432954 CDH7Q9ULB5 785 aa11.37□□□□□ -0.59
CCDC171-202ENST00000432954 ARHGEF37A1IGU5 675 aa11.36□□□□□ -0.59
CCDC171-202ENST00000432954 LRRIQ4A6NIV6 560 aa11.36□□□□□ -0.59
CCDC171-202ENST00000432954 ZNF98A6NK75 572 aa11.36□□□□□ -0.59
CCDC171-202ENST00000432954 DDX3XO00571 662 aaKnown RBP eCLIP11.36□□□□□ -0.59
CCDC171-202ENST00000432954 ABCC4O15439 1325 aa11.36□□□□□ -0.59
CCDC171-202ENST00000432954 NUAK1O60285 661 aa11.36□□□□□ -0.59
CCDC171-202ENST00000432954 PDE8AO60658 829 aa11.36□□□□□ -0.59
CCDC171-202ENST00000432954 EEF2P13639 858 aaKnown RBP11.36□□□□□ -0.59
CCDC171-202ENST00000432954 CDH5P33151 784 aaPredicted RBP11.36□□□□□ -0.59
CCDC171-202ENST00000432954 ABCG1P45844 678 aa11.36□□□□□ -0.59
CCDC171-202ENST00000432954 NPY2RP49146 381 aa11.36□□□□□ -0.59
CCDC171-202ENST00000432954 RAP1GDS1P52306 607 aa11.36□□□□□ -0.59
CCDC171-202ENST00000432954 ERVK-24P63145 666 aa11.36□□□□□ -0.59
CCDC171-202ENST00000432954 ROR1Q01973 937 aa11.36□□□□□ -0.59
CCDC171-202ENST00000432954 IDI1Q13907 227 aa11.36□□□□□ -0.59
CCDC171-202ENST00000432954 KRT81Q14533 505 aa11.36□□□□□ -0.59
CCDC171-202ENST00000432954 PDK3Q15120 406 aa11.36□□□□□ -0.59
CCDC171-202ENST00000432954 OASLQ15646 514 aaKnown RBP11.36□□□□□ -0.59
CCDC171-202ENST00000432954 MAPK6Q16659 721 aa11.36□□□□□ -0.59
CCDC171-202ENST00000432954 DGKDQ16760 1214 aa11.36□□□□□ -0.59
CCDC171-202ENST00000432954 ANKRD20A4Q4UJ75 823 aa11.36□□□□□ -0.59
CCDC171-202ENST00000432954 ADGRG6Q86SQ4 1221 aa11.36□□□□□ -0.59
CCDC171-202ENST00000432954 PALM2Q8IXS6 379 aa11.36□□□□□ -0.59
CCDC171-202ENST00000432954 PROM2Q8N271 834 aa11.36□□□□□ -0.59
CCDC171-202ENST00000432954 VGLL2Q8N8G2 317 aa11.36□□□□□ -0.59
CCDC171-202ENST00000432954 ASCC1Q8N9N2 400 aaKnown RBP11.36□□□□□ -0.59
CCDC171-202ENST00000432954 OR6P1Q8NGX9 317 aa11.36□□□□□ -0.59
CCDC171-202ENST00000432954 KCTD4Q8WVF5 259 aa11.36□□□□□ -0.59
CCDC171-202ENST00000432954 ARAP3Q8WWN8 1544 aa11.36□□□□□ -0.59
CCDC171-202ENST00000432954 FOXJ1Q92949 421 aa11.36□□□□□ -0.59
CCDC171-202ENST00000432954 LPPQ93052 612 aa11.36□□□□□ -0.59
CCDC171-202ENST00000432954 GRAMD1AQ96CP6 724 aa11.36□□□□□ -0.59
CCDC171-202ENST00000432954 UBAC1Q9BSL1 405 aa11.36□□□□□ -0.59
CCDC171-202ENST00000432954 ISCA1Q9BUE6 129 aa11.36□□□□□ -0.59
CCDC171-202ENST00000432954 MLPHQ9BV36 600 aaPredicted RBP11.36□□□□□ -0.59
CCDC171-202ENST00000432954 LMAN2LQ9H0V9 348 aa11.36□□□□□ -0.59
CCDC171-202ENST00000432954 OLFML3Q9NRN5 406 aa11.36□□□□□ -0.59
CCDC171-202ENST00000432954 TINAGQ9UJW2 476 aa11.36□□□□□ -0.59
CCDC171-202ENST00000432954 MROH7-TTC4A0A0A0MT08 1334 aa11.36□□□□□ -0.59
CCDC171-202ENST00000432954 SLC9B1P1A6NJY1 282 aa11.35□□□□□ -0.59
CCDC171-202ENST00000432954 TOR1AO14656 332 aa11.35□□□□□ -0.59
CCDC171-202ENST00000432954 DNAJC6O75061 913 aa11.35□□□□□ -0.59
CCDC171-202ENST00000432954 HEXIM1O94992 359 aaKnown RBP11.35□□□□□ -0.59
CCDC171-202ENST00000432954 HEXBP07686 556 aa11.35□□□□□ -0.59
CCDC171-202ENST00000432954 CD48P09326 243 aa11.35□□□□□ -0.59
CCDC171-202ENST00000432954 TCP1P17987 556 aaKnown RBP11.35□□□□□ -0.59
CCDC171-202ENST00000432954 ATF4P18848 351 aaPredicted RBP11.35□□□□□ -0.59
CCDC171-202ENST00000432954 PLCG1P19174 1290 aa11.35□□□□□ -0.59
CCDC171-202ENST00000432954 TALDO1P37837 337 aa11.35□□□□□ -0.59
CCDC171-202ENST00000432954 CD86P42081 329 aa11.35□□□□□ -0.59
CCDC171-202ENST00000432954 ATP5OP48047 213 aa11.35□□□□□ -0.59
CCDC171-202ENST00000432954 ERVK-21P61565 698 aa11.35□□□□□ -0.59
CCDC171-202ENST00000432954 GALK2Q01415 458 aa11.35□□□□□ -0.59
CCDC171-202ENST00000432954 APOFQ13790 326 aa11.35□□□□□ -0.59
CCDC171-202ENST00000432954 DHX34Q14147 1143 aaKnown RBP11.35□□□□□ -0.59
CCDC171-202ENST00000432954 PPP2R5EQ16537 467 aa11.35□□□□□ -0.59
CCDC171-202ENST00000432954 TRIM16LQ309B1 348 aa11.35□□□□□ -0.59
CCDC171-202ENST00000432954 HP1BP3Q5SSJ5 553 aaPredicted RBP11.35□□□□□ -0.59
CCDC171-202ENST00000432954 ANKLE2Q86XL3 938 aa11.35□□□□□ -0.59
CCDC171-202ENST00000432954 OR8H2Q8N162 312 aa11.35□□□□□ -0.59
CCDC171-202ENST00000432954 DEPDC4Q8N2C3 294 aa11.35□□□□□ -0.59
CCDC171-202ENST00000432954 ANKRD13CQ8N6S4 541 aa11.35□□□□□ -0.59
CCDC171-202ENST00000432954 SIMC1Q8NDZ2 872 aa11.35□□□□□ -0.59
CCDC171-202ENST00000432954 NCOA7Q8NI08 942 aa11.35□□□□□ -0.59
CCDC171-202ENST00000432954 GRPEL2Q8TAA5 225 aa11.35□□□□□ -0.59
CCDC171-202ENST00000432954 GANCQ8TET4 914 aa11.35□□□□□ -0.59
CCDC171-202ENST00000432954 LRRC59Q96AG4 307 aaKnown RBP11.35□□□□□ -0.59
CCDC171-202ENST00000432954 CMTM3Q96MX0 182 aa11.35□□□□□ -0.59
CCDC171-202ENST00000432954 RUNDC3BQ96NL0 473 aa11.35□□□□□ -0.59
CCDC171-202ENST00000432954 PURBQ96QR8 312 aaKnown RBP11.35□□□□□ -0.59
CCDC171-202ENST00000432954 CDK5RAP1Q96SZ6 601 aaKnown RBP11.35□□□□□ -0.59
CCDC171-202ENST00000432954 HINFPQ9BQA5 517 aa11.35□□□□□ -0.59
CCDC171-202ENST00000432954 SLC6A17Q9H1V8 727 aa11.35□□□□□ -0.59
CCDC171-202ENST00000432954 ZNF696Q9H7X3 374 aa11.35□□□□□ -0.59
CCDC171-202ENST00000432954 ERVMER34-1Q9H9K5 563 aa11.35□□□□□ -0.59
CCDC171-202ENST00000432954 LY9Q9HBG7 655 aa11.35□□□□□ -0.59
CCDC171-202ENST00000432954 EPB41L5Q9HCM4 733 aa11.35□□□□□ -0.59
CCDC171-202ENST00000432954 FAM105AQ9NUU6 356 aa11.35□□□□□ -0.59
CCDC171-202ENST00000432954 CEP72Q9P209 647 aa11.35□□□□□ -0.59
CCDC171-202ENST00000432954 RNF14Q9UBS8 474 aa11.35□□□□□ -0.59
CCDC171-202ENST00000432954 CLEC4AQ9UMR7 237 aa11.35□□□□□ -0.59
CCDC171-202ENST00000432954 PCM1Q15154 2024 aa11.35□□□□□ -0.59
CCDC171-202ENST00000432954 F8W8V4 182 aa11.35□□□□□ -0.59
CCDC171-202ENST00000432954 H3BRJ5 948 aa11.35□□□□□ -0.59
CCDC171-202ENST00000432954 ZNF701M0R085 212 aaPredicted RBP11.35□□□□□ -0.59
CCDC171-202ENST00000432954 ATP5BP06576 529 aaKnown RBP11.35□□□□□ -0.59
CCDC171-202ENST00000432954 CPB1P15086 417 aa11.35□□□□□ -0.59
CCDC171-202ENST00000432954 GNALP38405 381 aa11.35□□□□□ -0.59
CCDC171-202ENST00000432954 IREB2P48200 963 aaKnown RBP11.35□□□□□ -0.59
CCDC171-202ENST00000432954 PIP4K2AP48426 406 aaPredicted RBP11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms