RNA–Protein interactions for RNA: ENST00000431803.2

CDC42-IT1-201, CDC42 intronic transcript 1, humanhuman

TSL 1 (best) BASIC

Gene CDC42-IT1, Length 692 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-IT1-201ENST00000431803 DMWDQ09019 674 aa10.08□□□□□ -0.8
CDC42-IT1-201ENST00000431803 MYO1EQ12965 1108 aa10.08□□□□□ -0.8
CDC42-IT1-201ENST00000431803 PUM1Q14671 1186 aaKnown RBP eCLIP10.08□□□□□ -0.8
CDC42-IT1-201ENST00000431803 PON2Q15165 354 aa10.08□□□□□ -0.8
CDC42-IT1-201ENST00000431803 SURF1Q15526 300 aa10.08□□□□□ -0.8
CDC42-IT1-201ENST00000431803 SNRNP35Q16560 246 aaKnown RBP10.08□□□□□ -0.8
CDC42-IT1-201ENST00000431803 DDR2Q16832 855 aa10.08□□□□□ -0.8
CDC42-IT1-201ENST00000431803 DUOXA2Q1HG44 320 aa10.08□□□□□ -0.8
CDC42-IT1-201ENST00000431803 TMEM196Q5HYL7 178 aa10.08□□□□□ -0.8
CDC42-IT1-201ENST00000431803 FAM26FQ5R3K3 315 aa10.08□□□□□ -0.8
CDC42-IT1-201ENST00000431803 TXNDC8Q6A555 127 aa10.08□□□□□ -0.8
CDC42-IT1-201ENST00000431803 DPH6Q7L8W6 267 aa10.08□□□□□ -0.8
CDC42-IT1-201ENST00000431803 PRR7Q8TB68 274 aa10.08□□□□□ -0.8
CDC42-IT1-201ENST00000431803 ZNF507Q8TCN5 953 aa10.08□□□□□ -0.8
CDC42-IT1-201ENST00000431803 NOC3LQ8WTT2 800 aaKnown RBP10.08□□□□□ -0.8
CDC42-IT1-201ENST00000431803 MRPS31Q92665 395 aaKnown RBP10.08□□□□□ -0.8
CDC42-IT1-201ENST00000431803 SECISBP2LQ93073 1101 aaKnown RBP10.08□□□□□ -0.8
CDC42-IT1-201ENST00000431803 DHX58Q96C10 678 aa10.08□□□□□ -0.8
CDC42-IT1-201ENST00000431803 HPDLQ96IR7 371 aa10.08□□□□□ -0.8
CDC42-IT1-201ENST00000431803 C7orf25Q9BPX7 421 aa10.08□□□□□ -0.8
CDC42-IT1-201ENST00000431803 MAGEF1Q9HAY2 307 aa10.08□□□□□ -0.8
CDC42-IT1-201ENST00000431803 KIAA1586Q9HCI6 787 aa10.08□□□□□ -0.8
CDC42-IT1-201ENST00000431803 AGPAT3Q9NRZ7 376 aa10.08□□□□□ -0.8
CDC42-IT1-201ENST00000431803 GKN1Q9NS71 199 aa10.08□□□□□ -0.8
CDC42-IT1-201ENST00000431803 C2orf42Q9NWW7 574 aa10.08□□□□□ -0.8
CDC42-IT1-201ENST00000431803 TFIP11Q9UBB9 837 aaKnown RBP10.08□□□□□ -0.8
CDC42-IT1-201ENST00000431803 UXTQ9UBK9 157 aaPredicted RBP10.08□□□□□ -0.8
CDC42-IT1-201ENST00000431803 MAGED2Q9UNF1 606 aaPredicted RBP10.08□□□□□ -0.8
CDC42-IT1-201ENST00000431803 TRDMT1O14717 391 aaKnown RBP10.07□□□□□ -0.8
CDC42-IT1-201ENST00000431803 ATP2C2O75185 946 aa10.07□□□□□ -0.8
CDC42-IT1-201ENST00000431803 TNNC2P02585 160 aa10.07□□□□□ -0.8
CDC42-IT1-201ENST00000431803 WARSP23381 471 aaKnown RBP10.07□□□□□ -0.8
CDC42-IT1-201ENST00000431803 LMO2P25791 158 aa10.07□□□□□ -0.8
CDC42-IT1-201ENST00000431803 SNRPFP62306 86 aaKnown RBP10.07□□□□□ -0.8
CDC42-IT1-201ENST00000431803 LMNB2Q03252 620 aa10.07□□□□□ -0.8
CDC42-IT1-201ENST00000431803 FAM160A1Q05DH4 1040 aa10.07□□□□□ -0.8
CDC42-IT1-201ENST00000431803 USP4Q13107 963 aa10.07□□□□□ -0.8
CDC42-IT1-201ENST00000431803 RUNX3Q13761 415 aa10.07□□□□□ -0.8
CDC42-IT1-201ENST00000431803 ZNF77Q15935 545 aa10.07□□□□□ -0.8
CDC42-IT1-201ENST00000431803 BMT2Q1RMZ1 405 aa10.07□□□□□ -0.8
CDC42-IT1-201ENST00000431803 TRIM68Q6AZZ1 485 aa10.07□□□□□ -0.8
CDC42-IT1-201ENST00000431803 LAIR1Q6GTX8 287 aa10.07□□□□□ -0.8
CDC42-IT1-201ENST00000431803 UNC13DQ70J99 1090 aa10.07□□□□□ -0.8
CDC42-IT1-201ENST00000431803 TRAPPC11Q7Z392 1133 aa10.07□□□□□ -0.8
CDC42-IT1-201ENST00000431803 DGLUCYQ7Z3D6 616 aa10.07□□□□□ -0.8
CDC42-IT1-201ENST00000431803 LONP2Q86WA8 852 aa10.07□□□□□ -0.8
CDC42-IT1-201ENST00000431803 SPATA2LQ8IUW3 424 aaPredicted RBP10.07□□□□□ -0.8
CDC42-IT1-201ENST00000431803 SCFD1Q8WVM8 642 aa10.07□□□□□ -0.8
CDC42-IT1-201ENST00000431803 SPATA17Q96L03 361 aa10.07□□□□□ -0.8
CDC42-IT1-201ENST00000431803 CEP295NLQ96MC4 621 aa10.07□□□□□ -0.8
CDC42-IT1-201ENST00000431803 SLC22A12Q96S37 553 aa10.07□□□□□ -0.8
CDC42-IT1-201ENST00000431803 SYT15Q9BQS2 421 aa10.07□□□□□ -0.8
CDC42-IT1-201ENST00000431803 GZF1Q9H116 711 aaPredicted RBP10.07□□□□□ -0.8
CDC42-IT1-201ENST00000431803 EBF3Q9H4W6 596 aa10.07□□□□□ -0.8
CDC42-IT1-201ENST00000431803 PARD6AQ9NPB6 346 aa10.07□□□□□ -0.8
CDC42-IT1-201ENST00000431803 CRTAC1Q9NQ79 661 aa10.07□□□□□ -0.8
CDC42-IT1-201ENST00000431803 CDH9Q9ULB4 789 aa10.07□□□□□ -0.8
CDC42-IT1-201ENST00000431803 PTPRDP23468 1912 aa10.07□□□□□ -0.8
CDC42-IT1-201ENST00000431803 GREB1Q4ZG55 1949 aa10.06□□□□□ -0.8
CDC42-IT1-201ENST00000431803 SPTBN2O15020 2390 aa10.06□□□□□ -0.8
CDC42-IT1-201ENST00000431803 MED19A0JLT2 244 aaPredicted RBP10.06□□□□□ -0.8
CDC42-IT1-201ENST00000431803 CHURC1-FNTBB4DL54 471 aa10.06□□□□□ -0.8
CDC42-IT1-201ENST00000431803 POLR2DO15514 142 aaKnown RBP10.06□□□□□ -0.8
CDC42-IT1-201ENST00000431803 ZSCAN22P10073 491 aaPredicted RBP10.06□□□□□ -0.8
CDC42-IT1-201ENST00000431803 PDIA4P13667 645 aaKnown RBP10.06□□□□□ -0.8
CDC42-IT1-201ENST00000431803 ARSAP15289 507 aa10.06□□□□□ -0.8
CDC42-IT1-201ENST00000431803 CNR2P34972 360 aa10.06□□□□□ -0.8
CDC42-IT1-201ENST00000431803 FNTBP49356 437 aa10.06□□□□□ -0.8
CDC42-IT1-201ENST00000431803 PSMC1P62191 440 aaKnown RBP10.06□□□□□ -0.8
CDC42-IT1-201ENST00000431803 CYP24A1Q07973 514 aa10.06□□□□□ -0.8
CDC42-IT1-201ENST00000431803 MTF1Q14872 753 aa10.06□□□□□ -0.8
CDC42-IT1-201ENST00000431803 PSMD6Q15008 389 aa10.06□□□□□ -0.8
CDC42-IT1-201ENST00000431803 PDGFRLQ15198 375 aa10.06□□□□□ -0.8
CDC42-IT1-201ENST00000431803 MAPRE1Q15691 268 aaKnown RBP10.06□□□□□ -0.8
CDC42-IT1-201ENST00000431803 RSPO4Q2I0M5 234 aaPredicted RBP10.06□□□□□ -0.8
CDC42-IT1-201ENST00000431803 PKDCCQ504Y2 493 aa10.06□□□□□ -0.8
CDC42-IT1-201ENST00000431803 FSTL4Q6MZW2 842 aa10.06□□□□□ -0.8
CDC42-IT1-201ENST00000431803 PKN3Q6P5Z2 889 aa10.06□□□□□ -0.8
CDC42-IT1-201ENST00000431803 VSTM1Q6UX27 236 aa10.06□□□□□ -0.8
CDC42-IT1-201ENST00000431803 C4orf50Q6ZRC1 276 aa10.06□□□□□ -0.8
CDC42-IT1-201ENST00000431803 C12orf56Q8IXR9 622 aa10.06□□□□□ -0.8
CDC42-IT1-201ENST00000431803 XXYLT1Q8NBI6 393 aa10.06□□□□□ -0.8
CDC42-IT1-201ENST00000431803 MYLPFQ96A32 169 aa10.06□□□□□ -0.8
CDC42-IT1-201ENST00000431803 CGRRF1Q99675 332 aa10.06□□□□□ -0.8
CDC42-IT1-201ENST00000431803 GCNT4Q9P109 453 aa10.06□□□□□ -0.8
CDC42-IT1-201ENST00000431803 GMEB2Q9UKD1 530 aa10.06□□□□□ -0.8
CDC42-IT1-201ENST00000431803 RAB23Q9ULC3 237 aa10.06□□□□□ -0.8
CDC42-IT1-201ENST00000431803 R3HCC1Q9Y3T6 440 aaKnown RBP10.06□□□□□ -0.8
CDC42-IT1-201ENST00000431803 NME7Q9Y5B8 376 aa10.06□□□□□ -0.8
CDC42-IT1-201ENST00000431803 ANAPC1Q9H1A4 1944 aa10.05□□□□□ -0.8
CDC42-IT1-201ENST00000431803 ZNF638Q14966 1978 aaKnown RBP10.05□□□□□ -0.8
CDC42-IT1-201ENST00000431803 TRAV19A0A0A6YYK7 116 aa10.05□□□□□ -0.8
CDC42-IT1-201ENST00000431803 C2orf78A6NCI8 922 aa10.05□□□□□ -0.8
CDC42-IT1-201ENST00000431803 PRR5-ARHGAP8B1AHC4 643 aa10.05□□□□□ -0.8
CDC42-IT1-201ENST00000431803 LRP3O75074 770 aa10.05□□□□□ -0.8
CDC42-IT1-201ENST00000431803 TACC1O75410 805 aa10.05□□□□□ -0.8
CDC42-IT1-201ENST00000431803 STAU1O95793 577 aaKnown RBP10.05□□□□□ -0.8
CDC42-IT1-201ENST00000431803 F13A1P00488 732 aa10.05□□□□□ -0.8
CDC42-IT1-201ENST00000431803 CST3P01034 146 aaPredicted RBP10.05□□□□□ -0.8
CDC42-IT1-201ENST00000431803 CKMP06732 381 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms