RNA–Protein interactions for RNA: ENST00000431736.6

UBE4A-202, Transcript of ubiquitination factor E4A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene UBE4A, Length 6,061 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4A-202ENST00000431736 CMTM8Q8IZV2 173 aa4.85□□□□□ -1.63
UBE4A-202ENST00000431736 GSDMBQ8TAX9 411 aa4.85□□□□□ -1.63
UBE4A-202ENST00000431736 ETNPPLQ8TBG4 499 aa4.85□□□□□ -1.63
UBE4A-202ENST00000431736 TRAF3IP1Q8TDR0 691 aaPredicted RBP4.85□□□□□ -1.63
UBE4A-202ENST00000431736 USP33Q8TEY7 942 aa4.85□□□□□ -1.63
UBE4A-202ENST00000431736 MYLPFQ96A32 169 aa4.85□□□□□ -1.63
UBE4A-202ENST00000431736 BTBD1Q9H0C5 482 aa4.85□□□□□ -1.63
UBE4A-202ENST00000431736 PRDM16Q9HAZ2 1276 aa4.85□□□□□ -1.63
UBE4A-202ENST00000431736 CYP3A43Q9HB55 503 aa4.85□□□□□ -1.63
UBE4A-202ENST00000431736 DOCK3Q8IZD9 2030 aa4.85□□□□□ -1.63
UBE4A-202ENST00000431736 TMEM189-UBE2V1I3L0A0 370 aa4.84□□□□□ -1.63
UBE4A-202ENST00000431736 THAP12O43422 761 aa4.84□□□□□ -1.63
UBE4A-202ENST00000431736 FBXO21O94952 628 aa4.84□□□□□ -1.63
UBE4A-202ENST00000431736 GJA1P17302 382 aa4.84□□□□□ -1.63
UBE4A-202ENST00000431736 ACAT1P24752 427 aaKnown RBP4.84□□□□□ -1.63
UBE4A-202ENST00000431736 MPLP40238 635 aa4.84□□□□□ -1.63
UBE4A-202ENST00000431736 ATP2C1P98194 919 aaPredicted RBP4.84□□□□□ -1.63
UBE4A-202ENST00000431736 MPPE1Q53F39 396 aa4.84□□□□□ -1.63
UBE4A-202ENST00000431736 C9orf57Q5W0N0 161 aa4.84□□□□□ -1.63
UBE4A-202ENST00000431736 NUGGCQ68CJ6 796 aa4.84□□□□□ -1.63
UBE4A-202ENST00000431736 DCUN1D2Q6PH85 259 aa4.84□□□□□ -1.63
UBE4A-202ENST00000431736 CACUL1Q86Y37 369 aa4.84□□□□□ -1.63
UBE4A-202ENST00000431736 NAT16Q8N8M0 369 aa4.84□□□□□ -1.63
UBE4A-202ENST00000431736 ARL14EPQ8N8R7 260 aaPredicted RBP4.84□□□□□ -1.63
UBE4A-202ENST00000431736 TMEM40Q8WWA1 233 aa4.84□□□□□ -1.63
UBE4A-202ENST00000431736 OR8D1Q8WZ84 308 aa4.84□□□□□ -1.63
UBE4A-202ENST00000431736 FAM117AQ9C073 453 aa4.84□□□□□ -1.63
UBE4A-202ENST00000431736 SLC39A2Q9NP94 309 aa4.84□□□□□ -1.63
UBE4A-202ENST00000431736 CPQQ9Y646 472 aa4.84□□□□□ -1.63
UBE4A-202ENST00000431736 MGAMO43451 1857 aa4.84□□□□□ -1.63
UBE4A-202ENST00000431736 OR4Q2P0C623 313 aa4.84□□□□□ -1.63
UBE4A-202ENST00000431736 VIPR2P41587 438 aa4.84□□□□□ -1.63
UBE4A-202ENST00000431736 EPHB1P54762 984 aa4.84□□□□□ -1.63
UBE4A-202ENST00000431736 POU5F1Q01860 360 aaKnown RBP4.84□□□□□ -1.63
UBE4A-202ENST00000431736 DLX2Q07687 328 aaPredicted RBP4.84□□□□□ -1.63
UBE4A-202ENST00000431736 LRMPQ12912 555 aa4.84□□□□□ -1.63
UBE4A-202ENST00000431736 TOB2Q14106 344 aaPredicted RBP4.84□□□□□ -1.63
UBE4A-202ENST00000431736 KRT33BQ14525 404 aa4.84□□□□□ -1.63
UBE4A-202ENST00000431736 POLD3Q15054 466 aaPredicted RBP4.84□□□□□ -1.63
UBE4A-202ENST00000431736 MARCH8Q5T0T0 291 aa4.84□□□□□ -1.63
UBE4A-202ENST00000431736 NPAS3Q8IXF0 933 aa4.84□□□□□ -1.63
UBE4A-202ENST00000431736 PIAS4Q8N2W9 510 aaPredicted RBP4.84□□□□□ -1.63
UBE4A-202ENST00000431736 RPLP0P6Q8NHW5 317 aa4.84□□□□□ -1.63
UBE4A-202ENST00000431736 RSAD2Q8WXG1 361 aa4.84□□□□□ -1.63
UBE4A-202ENST00000431736 HAPLN3Q96S86 360 aa4.84□□□□□ -1.63
UBE4A-202ENST00000431736 SEMA4GQ9NTN9 838 aa4.84□□□□□ -1.63
UBE4A-202ENST00000431736 M0QYV0 167 aa4.84□□□□□ -1.63
UBE4A-202ENST00000431736 INPP4BO15327 924 aa4.84□□□□□ -1.63
UBE4A-202ENST00000431736 DFNA5O60443 496 aa4.84□□□□□ -1.63
UBE4A-202ENST00000431736 RNF40O75150 1001 aa4.84□□□□□ -1.63
UBE4A-202ENST00000431736 ASLP04424 464 aa4.84□□□□□ -1.63
UBE4A-202ENST00000431736 KCNE1P15382 129 aa4.84□□□□□ -1.63
UBE4A-202ENST00000431736 CTNNA2P26232 953 aa4.84□□□□□ -1.63
UBE4A-202ENST00000431736 CDC25AP30304 524 aa4.84□□□□□ -1.63
UBE4A-202ENST00000431736 VCPP55072 806 aaKnown RBP4.84□□□□□ -1.63
UBE4A-202ENST00000431736 DDR2Q16832 855 aa4.84□□□□□ -1.63
UBE4A-202ENST00000431736 RTP2Q5QGT7 225 aa4.84□□□□□ -1.63
UBE4A-202ENST00000431736 PARM1Q6UWI2 310 aa4.84□□□□□ -1.63
UBE4A-202ENST00000431736 UNC13DQ70J99 1090 aa4.84□□□□□ -1.63
UBE4A-202ENST00000431736 MFN1Q8IWA4 741 aa4.84□□□□□ -1.63
UBE4A-202ENST00000431736 HJURPQ8NCD3 748 aaPredicted RBP4.84□□□□□ -1.63
UBE4A-202ENST00000431736 CCDC97Q96F63 343 aaPredicted RBP4.84□□□□□ -1.63
UBE4A-202ENST00000431736 RUSC1Q9BVN2 902 aa4.84□□□□□ -1.63
UBE4A-202ENST00000431736 TPSD1Q9BZJ3 242 aa4.84□□□□□ -1.63
UBE4A-202ENST00000431736 COL4A1P02462 1669 aa4.84□□□□□ -1.63
UBE4A-202ENST00000431736 SMCHD1A6NHR9 2005 aa4.84□□□□□ -1.63
UBE4A-202ENST00000431736 ADCY5O95622 1261 aa4.84□□□□□ -1.64
UBE4A-202ENST00000431736 GAS8O95995 478 aa4.84□□□□□ -1.64
UBE4A-202ENST00000431736 HTR4Q13639 388 aa4.84□□□□□ -1.64
UBE4A-202ENST00000431736 COL9A3Q14050 684 aaPredicted RBP4.84□□□□□ -1.64
UBE4A-202ENST00000431736 SNRNP35Q16560 246 aaKnown RBP4.84□□□□□ -1.64
UBE4A-202ENST00000431736 GOLGA2P5Q9HBQ8 144 aa4.84□□□□□ -1.64
UBE4A-202ENST00000431736 GDF3Q9NR23 364 aa4.84□□□□□ -1.64
UBE4A-202ENST00000431736 SEPT10Q9P0V9 454 aa4.84□□□□□ -1.64
UBE4A-202ENST00000431736 KIAA1257Q9ULG3 409 aa4.84□□□□□ -1.64
UBE4A-202ENST00000431736 CYP8B1Q9UNU6 501 aa4.84□□□□□ -1.64
UBE4A-202ENST00000431736 INVSQ9Y283 1065 aa4.84□□□□□ -1.64
UBE4A-202ENST00000431736 MYH4Q9Y623 1939 aa4.84□□□□□ -1.64
UBE4A-202ENST00000431736 TBC1D3DA0A087WVF3 549 aa4.84□□□□□ -1.64
UBE4A-202ENST00000431736 TBC1D3IA0A087WXS9 549 aa4.84□□□□□ -1.64
UBE4A-202ENST00000431736 TBC1D3EA0A087X179 549 aa4.84□□□□□ -1.64
UBE4A-202ENST00000431736 TBC1D3KA0A087X1G2 549 aa4.84□□□□□ -1.64
UBE4A-202ENST00000431736 TBC1D3FA6NER0 549 aaPredicted RBP4.84□□□□□ -1.64
UBE4A-202ENST00000431736 TBC1D3LB9A6J9 549 aa4.84□□□□□ -1.64
UBE4A-202ENST00000431736 TMX2-CTNND1H3BSU7 103 aa4.84□□□□□ -1.64
UBE4A-202ENST00000431736 AKAP3O75969 853 aa4.84□□□□□ -1.64
UBE4A-202ENST00000431736 TBC1D3HP0C7X1 549 aa4.84□□□□□ -1.64
UBE4A-202ENST00000431736 AKT2P31751 481 aa4.84□□□□□ -1.64
UBE4A-202ENST00000431736 ORC1Q13415 861 aa4.84□□□□□ -1.64
UBE4A-202ENST00000431736 RAPGEF1Q13905 1077 aa4.84□□□□□ -1.64
UBE4A-202ENST00000431736 ZNF528Q3MIS6 628 aa4.84□□□□□ -1.64
UBE4A-202ENST00000431736 KRT39Q6A163 491 aa4.84□□□□□ -1.64
UBE4A-202ENST00000431736 TBC1D3GQ6DHY5 549 aa4.84□□□□□ -1.64
UBE4A-202ENST00000431736 TBC1D3CQ6IPX1 549 aa4.84□□□□□ -1.64
UBE4A-202ENST00000431736 TBC1D3Q8IZP1 549 aaPredicted RBP4.84□□□□□ -1.64
UBE4A-202ENST00000431736 GAB3Q8WWW8 586 aa4.84□□□□□ -1.64
UBE4A-202ENST00000431736 C18orf25Q96B23 403 aaPredicted RBP4.84□□□□□ -1.64
UBE4A-202ENST00000431736 AHCYL2Q96HN2 611 aaKnown RBP4.84□□□□□ -1.64
UBE4A-202ENST00000431736 IL12RB2Q99665 862 aa4.84□□□□□ -1.64
UBE4A-202ENST00000431736 MTMR12Q9C0I1 747 aa4.84□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms