RNA–Protein interactions for RNA: ENST00000431429.1

HMGB1P27-201, Transcript of high mobility group box 1 pseudogene 27, humanhuman

BASIC

Gene HMGB1P27, Length 603 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P27-201ENST00000431429 COL15A1P39059 1388 aa3.71□□□□□ -1.82
HMGB1P27-201ENST00000431429 ZNF536O15090 1300 aa3.7□□□□□ -1.82
HMGB1P27-201ENST00000431429 A0A0B4J269 797 aa3.7□□□□□ -1.82
HMGB1P27-201ENST00000431429 hCG_1984214I3L0E3 225 aa3.7□□□□□ -1.82
HMGB1P27-201ENST00000431429 AGPSO00116 658 aa3.7□□□□□ -1.82
HMGB1P27-201ENST00000431429 SH3BP5O60239 455 aa3.7□□□□□ -1.82
HMGB1P27-201ENST00000431429 PIAS2O75928 621 aa3.7□□□□□ -1.82
HMGB1P27-201ENST00000431429 CD53P19397 219 aa3.7□□□□□ -1.82
HMGB1P27-201ENST00000431429 NR4A1P22736 598 aa3.7□□□□□ -1.82
HMGB1P27-201ENST00000431429 ACRV1P26436 265 aa3.7□□□□□ -1.82
HMGB1P27-201ENST00000431429 TXKP42681 527 aa3.7□□□□□ -1.82
HMGB1P27-201ENST00000431429 NDUFV1P49821 464 aa3.7□□□□□ -1.82
HMGB1P27-201ENST00000431429 VAV2P52735 878 aa3.7□□□□□ -1.82
HMGB1P27-201ENST00000431429 BCAT1P54687 386 aa3.7□□□□□ -1.82
HMGB1P27-201ENST00000431429 POLE2P56282 527 aa3.7□□□□□ -1.82
HMGB1P27-201ENST00000431429 RPS7P62081 194 aaKnown RBP3.7□□□□□ -1.82
HMGB1P27-201ENST00000431429 HHEXQ03014 270 aa3.7□□□□□ -1.82
HMGB1P27-201ENST00000431429 RALBP1Q15311 655 aa3.7□□□□□ -1.82
HMGB1P27-201ENST00000431429 RABL3Q5HYI8 236 aa3.7□□□□□ -1.82
HMGB1P27-201ENST00000431429 FBXO47Q5MNV8 452 aa3.7□□□□□ -1.82
HMGB1P27-201ENST00000431429 VPS53Q5VIR6 699 aa3.7□□□□□ -1.82
HMGB1P27-201ENST00000431429 SFRP4Q6FHJ7 346 aaPredicted RBP3.7□□□□□ -1.82
HMGB1P27-201ENST00000431429 SULT6B1Q6IMI4 303 aa3.7□□□□□ -1.82
HMGB1P27-201ENST00000431429 TMED8Q6PL24 325 aaPredicted RBP3.7□□□□□ -1.82
HMGB1P27-201ENST00000431429 GLB1LQ6UWU2 654 aa3.7□□□□□ -1.82
HMGB1P27-201ENST00000431429 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP3.7□□□□□ -1.82
HMGB1P27-201ENST00000431429 MOGAT3Q86VF5 341 aa3.7□□□□□ -1.82
HMGB1P27-201ENST00000431429 SGMS1Q86VZ5 419 aa3.7□□□□□ -1.82
HMGB1P27-201ENST00000431429 GATAD2AQ86YP4 633 aa3.7□□□□□ -1.82
HMGB1P27-201ENST00000431429 TMPRSS6Q8IU80 811 aa3.7□□□□□ -1.82
HMGB1P27-201ENST00000431429 ANKRD18AQ8IVF6 992 aa3.7□□□□□ -1.82
HMGB1P27-201ENST00000431429 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP3.7□□□□□ -1.82
HMGB1P27-201ENST00000431429 TTC9BQ8N6N2 239 aa3.7□□□□□ -1.82
HMGB1P27-201ENST00000431429 SIMC1Q8NDZ2 872 aa3.7□□□□□ -1.82
HMGB1P27-201ENST00000431429 MBD3L2Q8NHZ7 208 aaPredicted RBP3.7□□□□□ -1.82
HMGB1P27-201ENST00000431429 HERVK_113Q902F9 699 aa3.7□□□□□ -1.82
HMGB1P27-201ENST00000431429 AMBRA1Q9C0C7 1298 aa3.7□□□□□ -1.82
HMGB1P27-201ENST00000431429 TWSG1Q9GZX9 223 aa3.7□□□□□ -1.82
HMGB1P27-201ENST00000431429 ZNF768Q9H5H4 540 aaKnown RBP3.7□□□□□ -1.82
HMGB1P27-201ENST00000431429 MLXIPQ9HAP2 919 aa3.7□□□□□ -1.82
HMGB1P27-201ENST00000431429 PRDM16Q9HAZ2 1276 aa3.7□□□□□ -1.82
HMGB1P27-201ENST00000431429 HELLSQ9NRZ9 838 aa3.7□□□□□ -1.82
HMGB1P27-201ENST00000431429 ZSCAN32Q9NX65 697 aa3.7□□□□□ -1.82
HMGB1P27-201ENST00000431429 CEP72Q9P209 647 aa3.7□□□□□ -1.82
HMGB1P27-201ENST00000431429 HERC5Q9UII4 1024 aaKnown RBP3.7□□□□□ -1.82
HMGB1P27-201ENST00000431429 CNOT11Q9UKZ1 510 aaKnown RBP3.7□□□□□ -1.82
HMGB1P27-201ENST00000431429 HPSEQ9Y251 543 aa3.7□□□□□ -1.82
HMGB1P27-201ENST00000431429 MRPS17Q9Y2R5 130 aaKnown RBP3.7□□□□□ -1.82
HMGB1P27-201ENST00000431429 A0A0G2JLL6 359 aaPredicted RBP3.69□□□□□ -1.82
HMGB1P27-201ENST00000431429 GXYLT2A0PJZ3 443 aa3.69□□□□□ -1.82
HMGB1P27-201ENST00000431429 FAM90A18PA6NE21 464 aa3.69□□□□□ -1.82
HMGB1P27-201ENST00000431429 FAM90A16PA6NEW6 464 aa3.69□□□□□ -1.82
HMGB1P27-201ENST00000431429 TMEM200CA6NKL6 621 aa3.69□□□□□ -1.82
HMGB1P27-201ENST00000431429 FAM90A9PA6NNJ1 464 aa3.69□□□□□ -1.82
HMGB1P27-201ENST00000431429 FAM90A5PA8MXJ8 464 aa3.69□□□□□ -1.82
HMGB1P27-201ENST00000431429 B9A039 149 aa3.69□□□□□ -1.82
HMGB1P27-201ENST00000431429 EYA2O00167 538 aa3.69□□□□□ -1.82
HMGB1P27-201ENST00000431429 PLSCR1O15162 318 aa3.69□□□□□ -1.82
HMGB1P27-201ENST00000431429 NPHP1O15259 732 aa3.69□□□□□ -1.82
HMGB1P27-201ENST00000431429 HLA-DOAP06340 250 aa3.69□□□□□ -1.82
HMGB1P27-201ENST00000431429 ANXA6P08133 673 aa3.69□□□□□ -1.82
HMGB1P27-201ENST00000431429 ITGA2BP08514 1039 aa3.69□□□□□ -1.82
HMGB1P27-201ENST00000431429 FAM90A15PP0C7V4 464 aa3.69□□□□□ -1.82
HMGB1P27-201ENST00000431429 FAM90A14PP0C7W9 464 aa3.69□□□□□ -1.82
HMGB1P27-201ENST00000431429 ITGALP20701 1170 aa3.69□□□□□ -1.82
HMGB1P27-201ENST00000431429 GATA3P23771 443 aa3.69□□□□□ -1.82
HMGB1P27-201ENST00000431429 HIBADHP31937 336 aaKnown RBP3.69□□□□□ -1.82
HMGB1P27-201ENST00000431429 BMPR1AP36894 532 aa3.69□□□□□ -1.82
HMGB1P27-201ENST00000431429 NPTX2P47972 431 aa3.69□□□□□ -1.82
HMGB1P27-201ENST00000431429 CDK7P50613 346 aa3.69□□□□□ -1.82
HMGB1P27-201ENST00000431429 GEN1Q17RS7 908 aa3.69□□□□□ -1.82
HMGB1P27-201ENST00000431429 UBXN11Q5T124 520 aa3.69□□□□□ -1.82
HMGB1P27-201ENST00000431429 CERCAMQ5T4B2 595 aa3.69□□□□□ -1.82
HMGB1P27-201ENST00000431429 TTC22Q5TAA0 569 aa3.69□□□□□ -1.82
HMGB1P27-201ENST00000431429 ARMC6Q6NXE6 501 aa3.69□□□□□ -1.82
HMGB1P27-201ENST00000431429 MMS22LQ6ZRQ5 1243 aa3.69□□□□□ -1.82
HMGB1P27-201ENST00000431429 SLC44A2Q8IWA5 706 aaPredicted RBP3.69□□□□□ -1.82
HMGB1P27-201ENST00000431429 SCAMP5Q8TAC9 235 aa3.69□□□□□ -1.82
HMGB1P27-201ENST00000431429 SUN3Q8TAQ9 357 aa3.69□□□□□ -1.82
HMGB1P27-201ENST00000431429 DNAJB14Q8TBM8 379 aa3.69□□□□□ -1.82
HMGB1P27-201ENST00000431429 SMCR8Q8TEV9 937 aaPredicted RBP3.69□□□□□ -1.82
HMGB1P27-201ENST00000431429 THAP4Q8WY91 577 aa3.69□□□□□ -1.82
HMGB1P27-201ENST00000431429 PPP2R3CQ969Q6 453 aa3.69□□□□□ -1.82
HMGB1P27-201ENST00000431429 SDCCAG3Q96C92 435 aa3.69□□□□□ -1.82
HMGB1P27-201ENST00000431429 LTV1Q96GA3 475 aaPredicted RBP3.69□□□□□ -1.82
HMGB1P27-201ENST00000431429 PRPF18Q99633 342 aaKnown RBP3.69□□□□□ -1.82
HMGB1P27-201ENST00000431429 GPR20Q99678 358 aa3.69□□□□□ -1.82
HMGB1P27-201ENST00000431429 NUDT22Q9BRQ3 303 aa3.69□□□□□ -1.82
HMGB1P27-201ENST00000431429 KRTAP3-1Q9BYR8 98 aa3.69□□□□□ -1.82
HMGB1P27-201ENST00000431429 SLC25A32Q9H2D1 315 aa3.69□□□□□ -1.82
HMGB1P27-201ENST00000431429 UNKLQ9H9P5 680 aaKnown RBP3.69□□□□□ -1.82
HMGB1P27-201ENST00000431429 FSCN3Q9NQT6 498 aa3.69□□□□□ -1.82
HMGB1P27-201ENST00000431429 RXFP3Q9NSD7 469 aa3.69□□□□□ -1.82
HMGB1P27-201ENST00000431429 AURKAIP1Q9NWT8 199 aaPredicted RBP3.69□□□□□ -1.82
HMGB1P27-201ENST00000431429 RNF181Q9P0P0 153 aa3.69□□□□□ -1.82
HMGB1P27-201ENST00000431429 DNAJB11Q9UBS4 358 aa3.69□□□□□ -1.82
HMGB1P27-201ENST00000431429 TOR1BO14657 336 aa3.68□□□□□ -1.82
HMGB1P27-201ENST00000431429 IRAK2O43187 625 aa3.68□□□□□ -1.82
HMGB1P27-201ENST00000431429 PROM1O43490 865 aa3.68□□□□□ -1.82
HMGB1P27-201ENST00000431429 LPXNO60711 386 aa3.68□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms