RNA–Protein interactions for RNA: ENST00000430858.1

HDAC6-207, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 618 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-207ENST00000430858 SLC35C1Q96A29 364 aa10.43□□□□□ -0.74
HDAC6-207ENST00000430858 RSPRY1Q96DX4 576 aa10.43□□□□□ -0.74
HDAC6-207ENST00000430858 SMARCD1Q96GM5 515 aa10.43□□□□□ -0.74
HDAC6-207ENST00000430858 MSANTD3Q96H12 275 aa10.43□□□□□ -0.74
HDAC6-207ENST00000430858 NELL2Q99435 816 aa10.43□□□□□ -0.74
HDAC6-207ENST00000430858 DUSP9Q99956 384 aaKnown RBP10.43□□□□□ -0.74
HDAC6-207ENST00000430858 MED10Q9BTT4 135 aa10.43□□□□□ -0.74
HDAC6-207ENST00000430858 NT5C1AQ9BXI3 368 aa10.43□□□□□ -0.74
HDAC6-207ENST00000430858 FAM124BQ9H5Z6 455 aaPredicted RBP10.43□□□□□ -0.74
HDAC6-207ENST00000430858 DMAP1Q9NPF5 467 aaPredicted RBP10.43□□□□□ -0.74
HDAC6-207ENST00000430858 HEBP1Q9NRV9 189 aa10.43□□□□□ -0.74
HDAC6-207ENST00000430858 TDP1Q9NUW8 608 aa10.43□□□□□ -0.74
HDAC6-207ENST00000430858 THG1LQ9NWX6 298 aaKnown RBP10.43□□□□□ -0.74
HDAC6-207ENST00000430858 CTNND2Q9UQB3 1225 aa10.43□□□□□ -0.74
HDAC6-207ENST00000430858 MRPS17Q9Y2R5 130 aaKnown RBP10.43□□□□□ -0.74
HDAC6-207ENST00000430858 COQ4Q9Y3A0 265 aa10.43□□□□□ -0.74
HDAC6-207ENST00000430858 TRAV19A0A0A6YYK7 116 aa10.42□□□□□ -0.74
HDAC6-207ENST00000430858 PMM2O15305 246 aa10.42□□□□□ -0.74
HDAC6-207ENST00000430858 NCAM2O15394 837 aa10.42□□□□□ -0.74
HDAC6-207ENST00000430858 LRRN2O75325 713 aa10.42□□□□□ -0.74
HDAC6-207ENST00000430858 RTN3O95197 1032 aaPredicted RBP10.42□□□□□ -0.74
HDAC6-207ENST00000430858 FGFR1OPO95684 399 aaKnown RBP10.42□□□□□ -0.74
HDAC6-207ENST00000430858 PDE6CP51160 858 aa10.42□□□□□ -0.74
HDAC6-207ENST00000430858 CACNA2D1P54289 1103 aa10.42□□□□□ -0.74
HDAC6-207ENST00000430858 USP46P62068 366 aa10.42□□□□□ -0.74
HDAC6-207ENST00000430858 NHLH1Q02575 133 aa10.42□□□□□ -0.74
HDAC6-207ENST00000430858 UBXN2BQ14CS0 331 aa10.42□□□□□ -0.74
HDAC6-207ENST00000430858 CCDC40Q4G0X9 1142 aa10.42□□□□□ -0.74
HDAC6-207ENST00000430858 C1orf228Q6PIY5 440 aa10.42□□□□□ -0.74
HDAC6-207ENST00000430858 GPIHBP1Q8IV16 184 aa10.42□□□□□ -0.74
HDAC6-207ENST00000430858 FUKQ8N0W3 1084 aa10.42□□□□□ -0.74
HDAC6-207ENST00000430858 NUP93Q8N1F7 819 aa10.42□□□□□ -0.74
HDAC6-207ENST00000430858 DTWD2Q8NBA8 298 aa10.42□□□□□ -0.74
HDAC6-207ENST00000430858 CSGALNACT1Q8TDX6 532 aa10.42□□□□□ -0.74
HDAC6-207ENST00000430858 USP13Q92995 863 aaPredicted RBP10.42□□□□□ -0.74
HDAC6-207ENST00000430858 LRRC3BQ96PB8 259 aa10.42□□□□□ -0.74
HDAC6-207ENST00000430858 SLITRK1Q96PX8 696 aa10.42□□□□□ -0.74
HDAC6-207ENST00000430858 FOXQ1Q9C009 403 aa10.42□□□□□ -0.74
HDAC6-207ENST00000430858 SMG9Q9H0W8 520 aaKnown RBP10.42□□□□□ -0.74
HDAC6-207ENST00000430858 C8orf33Q9H7E9 229 aaPredicted RBP10.42□□□□□ -0.74
HDAC6-207ENST00000430858 CSNK1G1Q9HCP0 422 aa10.42□□□□□ -0.74
HDAC6-207ENST00000430858 TRPC7Q9HCX4 862 aa10.42□□□□□ -0.74
HDAC6-207ENST00000430858 LTB4R2Q9NPC1 389 aa10.42□□□□□ -0.74
HDAC6-207ENST00000430858 TMEM30AQ9NV96 361 aa10.42□□□□□ -0.74
HDAC6-207ENST00000430858 COMMD8Q9NX08 183 aa10.42□□□□□ -0.74
HDAC6-207ENST00000430858 TRPM5Q9NZQ8 1165 aa10.42□□□□□ -0.74
HDAC6-207ENST00000430858 HMGXB4Q9UGU5 601 aa10.42□□□□□ -0.74
HDAC6-207ENST00000430858 ZNF840PA6NDX5 716 aa10.41□□□□□ -0.74
HDAC6-207ENST00000430858 FAM170BA6NMN3 283 aa10.41□□□□□ -0.74
HDAC6-207ENST00000430858 P4HA2O15460 535 aa10.41□□□□□ -0.74
HDAC6-207ENST00000430858 AP1G2O75843 785 aa10.41□□□□□ -0.74
HDAC6-207ENST00000430858 CKMP06732 381 aa10.41□□□□□ -0.74
HDAC6-207ENST00000430858 DCNP07585 359 aaKnown RBP10.41□□□□□ -0.74
HDAC6-207ENST00000430858 USP17L7P0C7H9 530 aa10.41□□□□□ -0.74
HDAC6-207ENST00000430858 CCDC130P13994 396 aa10.41□□□□□ -0.74
HDAC6-207ENST00000430858 HDCP19113 662 aa10.41□□□□□ -0.74
HDAC6-207ENST00000430858 CD58P19256 250 aa10.41□□□□□ -0.74
HDAC6-207ENST00000430858 CD72P21854 359 aa10.41□□□□□ -0.74
HDAC6-207ENST00000430858 YWHAQP27348 245 aa10.41□□□□□ -0.74
HDAC6-207ENST00000430858 MAGEA9P43362 315 aa10.41□□□□□ -0.74
HDAC6-207ENST00000430858 FMO5P49326 533 aa10.41□□□□□ -0.74
HDAC6-207ENST00000430858 KPNA1P52294 538 aaPredicted RBP10.41□□□□□ -0.74
HDAC6-207ENST00000430858 SLC5A3P53794 718 aa10.41□□□□□ -0.74
HDAC6-207ENST00000430858 MARSP56192 900 aaKnown RBP10.41□□□□□ -0.74
HDAC6-207ENST00000430858 STX17P56962 302 aa10.41□□□□□ -0.74
HDAC6-207ENST00000430858 CETN1Q12798 172 aa10.41□□□□□ -0.74
HDAC6-207ENST00000430858 ORC1Q13415 861 aa10.41□□□□□ -0.74
HDAC6-207ENST00000430858 C12orf29Q8N999 325 aa10.41□□□□□ -0.74
HDAC6-207ENST00000430858 PDZD8Q8NEN9 1154 aa10.41□□□□□ -0.74
HDAC6-207ENST00000430858 SLC2A14Q8TDB8 520 aa10.41□□□□□ -0.74
HDAC6-207ENST00000430858 WHAMMQ8TF30 809 aa10.41□□□□□ -0.74
HDAC6-207ENST00000430858 OVCA2Q8WZ82 227 aa10.41□□□□□ -0.74
HDAC6-207ENST00000430858 CYFIP2Q96F07 1278 aa10.41□□□□□ -0.74
HDAC6-207ENST00000430858 GBP4Q96PP9 640 aa10.41□□□□□ -0.74
HDAC6-207ENST00000430858 TWNKQ96RR1 684 aa10.41□□□□□ -0.74
HDAC6-207ENST00000430858 KCNK16Q96T55 309 aa10.41□□□□□ -0.74
HDAC6-207ENST00000430858 HNRNPABQ99729 332 aaKnown RBP10.41□□□□□ -0.74
HDAC6-207ENST00000430858 CLSTN2Q9H4D0 955 aa10.41□□□□□ -0.74
HDAC6-207ENST00000430858 KRT82Q9NSB4 513 aa10.41□□□□□ -0.74
HDAC6-207ENST00000430858 CISHQ9NSE2 258 aa10.41□□□□□ -0.74
HDAC6-207ENST00000430858 FAM49BQ9NUQ9 324 aa10.41□□□□□ -0.74
HDAC6-207ENST00000430858 IL37Q9NZH6 218 aa10.41□□□□□ -0.74
HDAC6-207ENST00000430858 GCNT4Q9P109 453 aa10.41□□□□□ -0.74
HDAC6-207ENST00000430858 DLGAP2Q9P1A6 1054 aa10.41□□□□□ -0.74
HDAC6-207ENST00000430858 RWDD2AQ9UIY3 292 aa10.41□□□□□ -0.74
HDAC6-207ENST00000430858 PIAS3Q9Y6X2 628 aa10.41□□□□□ -0.74
HDAC6-207ENST00000430858 TRIOO75962 3097 aa10.41□□□□□ -0.74
HDAC6-207ENST00000430858 KMT2EQ8IZD2 1858 aa10.4□□□□□ -0.74
HDAC6-207ENST00000430858 C2orf78A6NCI8 922 aa10.4□□□□□ -0.74
HDAC6-207ENST00000430858 SHISA7A6NL88 538 aa10.4□□□□□ -0.74
HDAC6-207ENST00000430858 H0Y858 1186 aa10.4□□□□□ -0.74
HDAC6-207ENST00000430858 TNFRSF10BO14763 440 aa10.4□□□□□ -0.74
HDAC6-207ENST00000430858 FAM200BP0CF97 657 aa10.4□□□□□ -0.74
HDAC6-207ENST00000430858 TCF3P15923 654 aa10.4□□□□□ -0.74
HDAC6-207ENST00000430858 TBXAS1P24557 533 aaPredicted RBP10.4□□□□□ -0.74
HDAC6-207ENST00000430858 TARSP26639 723 aaKnown RBP10.4□□□□□ -0.74
HDAC6-207ENST00000430858 MAP3K7CLP57077 242 aa10.4□□□□□ -0.74
HDAC6-207ENST00000430858 YWHAEP62258 255 aaKnown RBP10.4□□□□□ -0.74
HDAC6-207ENST00000430858 TAF10Q12962 218 aa10.4□□□□□ -0.74
HDAC6-207ENST00000430858 CUL2Q13617 745 aa10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms