RNA–Protein interactions for RNA: ENST00000430705.5

PTPRA-206, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 5

Gene PTPRA, Length 733 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-206ENST00000430705 DLG4P78352 724 aa17.36■□□□□ 0.37
PTPRA-206ENST00000430705 PPP2R5DQ14738 602 aa17.36■□□□□ 0.37
PTPRA-206ENST00000430705 PDGFRLQ15198 375 aa17.36■□□□□ 0.37
PTPRA-206ENST00000430705 HEATR6Q6AI08 1181 aaKnown RBP17.36■□□□□ 0.37
PTPRA-206ENST00000430705 DENND5BQ6ZUT9 1274 aa17.36■□□□□ 0.37
PTPRA-206ENST00000430705 SYNPOQ8N3V7 929 aa17.36■□□□□ 0.37
PTPRA-206ENST00000430705 SH3RF2Q8TEC5 729 aa17.36■□□□□ 0.37
PTPRA-206ENST00000430705 PARD3BQ8TEW8 1205 aa17.36■□□□□ 0.37
PTPRA-206ENST00000430705 OSCP1Q8WVF1 389 aa17.36■□□□□ 0.37
PTPRA-206ENST00000430705 B3GNT5Q9BYG0 378 aa17.36■□□□□ 0.37
PTPRA-206ENST00000430705 VRTNQ9H8Y1 702 aa17.36■□□□□ 0.37
PTPRA-206ENST00000430705 CGNQ9P2M7 1197 aaKnown RBP17.36■□□□□ 0.37
PTPRA-206ENST00000430705 CFAP45Q9UL16 551 aa17.36■□□□□ 0.37
PTPRA-206ENST00000430705 ARHGAP26Q9UNA1 814 aa17.36■□□□□ 0.37
PTPRA-206ENST00000430705 R3HCC1Q9Y3T6 440 aaKnown RBP17.36■□□□□ 0.37
PTPRA-206ENST00000430705 LAMA1P25391 3075 aa17.35■□□□□ 0.37
PTPRA-206ENST00000430705 MED19A0JLT2 244 aaPredicted RBP17.35■□□□□ 0.37
PTPRA-206ENST00000430705 OLFM2O95897 454 aa17.35■□□□□ 0.37
PTPRA-206ENST00000430705 C4BPAP04003 597 aaKnown RBP17.35■□□□□ 0.37
PTPRA-206ENST00000430705 PTPN1P18031 435 aaKnown RBP17.35■□□□□ 0.37
PTPRA-206ENST00000430705 CDH8P55286 799 aa17.35■□□□□ 0.37
PTPRA-206ENST00000430705 TNNC1P63316 161 aa17.35■□□□□ 0.37
PTPRA-206ENST00000430705 NOP14P78316 857 aaKnown RBP17.35■□□□□ 0.37
PTPRA-206ENST00000430705 FOXK2Q01167 660 aa17.35■□□□□ 0.37
PTPRA-206ENST00000430705 MAPRE1Q15691 268 aaKnown RBP17.35■□□□□ 0.37
PTPRA-206ENST00000430705 RSPO4Q2I0M5 234 aaPredicted RBP17.35■□□□□ 0.37
PTPRA-206ENST00000430705 GAB4Q2WGN9 574 aa17.35■□□□□ 0.37
PTPRA-206ENST00000430705 C1orf220Q5T0J3 134 aa17.35■□□□□ 0.37
PTPRA-206ENST00000430705 LAIR1Q6GTX8 287 aa17.35■□□□□ 0.37
PTPRA-206ENST00000430705 LONP2Q86WA8 852 aa17.35■□□□□ 0.37
PTPRA-206ENST00000430705 CEP57L1Q8IYX8 460 aa17.35■□□□□ 0.37
PTPRA-206ENST00000430705 OR6B3Q8NGW1 331 aa17.35■□□□□ 0.37
PTPRA-206ENST00000430705 TMEM174Q8WUU8 243 aa17.35■□□□□ 0.37
PTPRA-206ENST00000430705 C8orf48Q96LL4 319 aa17.35■□□□□ 0.37
PTPRA-206ENST00000430705 SNX25Q9H3E2 840 aa17.35■□□□□ 0.37
PTPRA-206ENST00000430705 ECT2Q9H8V3 914 aa17.35■□□□□ 0.37
PTPRA-206ENST00000430705 DUS2Q9NX74 493 aaKnown RBP17.35■□□□□ 0.37
PTPRA-206ENST00000430705 NXF1Q9UBU9 619 aaKnown RBP17.35■□□□□ 0.37
PTPRA-206ENST00000430705 NCOR2Q9Y618 2525 aa17.35■□□□□ 0.37
PTPRA-206ENST00000430705 FAM237AA0A1B0GTK4 181 aa17.34■□□□□ 0.37
PTPRA-206ENST00000430705 ZNF840PA6NDX5 716 aa17.34■□□□□ 0.37
PTPRA-206ENST00000430705 ANTXRLA6NF34 631 aa17.34■□□□□ 0.37
PTPRA-206ENST00000430705 TRIM66O15016 1216 aa17.34■□□□□ 0.37
PTPRA-206ENST00000430705 RNF40O75150 1001 aa17.34■□□□□ 0.37
PTPRA-206ENST00000430705 FAM163BP0C2L3 166 aa17.34■□□□□ 0.37
PTPRA-206ENST00000430705 CMA1P23946 247 aa17.34■□□□□ 0.37
PTPRA-206ENST00000430705 HOXA6P31267 233 aa17.34■□□□□ 0.37
PTPRA-206ENST00000430705 ATICP31939 592 aa17.34■□□□□ 0.37
PTPRA-206ENST00000430705 PXNP49023 591 aaPredicted RBP17.34■□□□□ 0.37
PTPRA-206ENST00000430705 GALK1P51570 392 aa17.34■□□□□ 0.37
PTPRA-206ENST00000430705 SCARA5Q6ZMJ2 495 aa17.34■□□□□ 0.37
PTPRA-206ENST00000430705 PRR23BQ6ZRT6 265 aa17.34■□□□□ 0.37
PTPRA-206ENST00000430705 PAQR9Q6ZVX9 377 aa17.34■□□□□ 0.37
PTPRA-206ENST00000430705 WDR5BQ86VZ2 330 aa17.34■□□□□ 0.37
PTPRA-206ENST00000430705 SLC9A9Q8IVB4 645 aa17.34■□□□□ 0.37
PTPRA-206ENST00000430705 B3GALNT2Q8NCR0 500 aa17.34■□□□□ 0.37
PTPRA-206ENST00000430705 TTC16Q8NEE8 873 aa17.34■□□□□ 0.37
PTPRA-206ENST00000430705 CEP295NLQ96MC4 621 aa17.34■□□□□ 0.37
PTPRA-206ENST00000430705 RNF38Q9H0F5 515 aa17.34■□□□□ 0.37
PTPRA-206ENST00000430705 LINC00597Q9H2U6 94 aa17.34■□□□□ 0.37
PTPRA-206ENST00000430705 EXOC1Q9NV70 894 aa17.34■□□□□ 0.37
PTPRA-206ENST00000430705 HMGXB4Q9UGU5 601 aa17.34■□□□□ 0.37
PTPRA-206ENST00000430705 OAS1P00973 400 aaKnown RBP17.33■□□□□ 0.36
PTPRA-206ENST00000430705 HDCP19113 662 aa17.33■□□□□ 0.36
PTPRA-206ENST00000430705 SPEM2Q0P670 501 aa17.33■□□□□ 0.36
PTPRA-206ENST00000430705 GRSF1Q12849 480 aaKnown RBP eCLIP17.33■□□□□ 0.36
PTPRA-206ENST00000430705 TRPC3Q13507 836 aa17.33■□□□□ 0.36
PTPRA-206ENST00000430705 SIM2Q14190 667 aaPredicted RBP17.33■□□□□ 0.36
PTPRA-206ENST00000430705 KCNB1Q14721 858 aa17.33■□□□□ 0.36
PTPRA-206ENST00000430705 ZNF699Q32M78 642 aa17.33■□□□□ 0.36
PTPRA-206ENST00000430705 CC2D1AQ6P1N0 951 aaPredicted RBP17.33■□□□□ 0.36
PTPRA-206ENST00000430705 CPA6Q8N4T0 437 aa17.33■□□□□ 0.36
PTPRA-206ENST00000430705 FSIP1Q8NA03 581 aa17.33■□□□□ 0.36
PTPRA-206ENST00000430705 GOLGA5Q8TBA6 731 aa17.33■□□□□ 0.36
PTPRA-206ENST00000430705 SYAP1Q96A49 352 aaPredicted RBP17.33■□□□□ 0.36
PTPRA-206ENST00000430705 ELOVL4Q9GZR5 314 aa17.33■□□□□ 0.36
PTPRA-206ENST00000430705 GOLPH3LQ9H4A5 285 aa17.33■□□□□ 0.36
PTPRA-206ENST00000430705 A8MXQ7 604 aa17.32■□□□□ 0.36
PTPRA-206ENST00000430705 LEFTY2O00292 366 aa17.32■□□□□ 0.36
PTPRA-206ENST00000430705 SCAMP3O14828 347 aaKnown RBP17.32■□□□□ 0.36
PTPRA-206ENST00000430705 NR3C1P04150 777 aa17.32■□□□□ 0.36
PTPRA-206ENST00000430705 CHRM1P11229 460 aaPredicted RBP17.32■□□□□ 0.36
PTPRA-206ENST00000430705 ANXA13P27216 316 aa17.32■□□□□ 0.36
PTPRA-206ENST00000430705 IFNAR2P48551 515 aa17.32■□□□□ 0.36
PTPRA-206ENST00000430705 NDUFA8P51970 172 aa17.32■□□□□ 0.36
PTPRA-206ENST00000430705 SLC7A9P82251 487 aa17.32■□□□□ 0.36
PTPRA-206ENST00000430705 TAF10Q12962 218 aa17.32■□□□□ 0.36
PTPRA-206ENST00000430705 BIRC3Q13489 604 aa17.32■□□□□ 0.36
PTPRA-206ENST00000430705 NCOA4Q13772 614 aa17.32■□□□□ 0.36
PTPRA-206ENST00000430705 PUM1Q14671 1186 aaKnown RBP eCLIP17.32■□□□□ 0.36
PTPRA-206ENST00000430705 DGLUCYQ7Z3D6 616 aa17.32■□□□□ 0.36
PTPRA-206ENST00000430705 FAM35AQ86V20 835 aa17.32■□□□□ 0.36
PTPRA-206ENST00000430705 ATP2A3Q93084 1043 aa17.32■□□□□ 0.36
PTPRA-206ENST00000430705 KCNK16Q96T55 309 aa17.32■□□□□ 0.36
PTPRA-206ENST00000430705 P2RY13Q9BPV8 354 aa17.32■□□□□ 0.36
PTPRA-206ENST00000430705 TRPM5Q9NZQ8 1165 aa17.32■□□□□ 0.36
PTPRA-206ENST00000430705 GMEB2Q9UKD1 530 aa17.32■□□□□ 0.36
PTPRA-206ENST00000430705 DYNC1LI1Q9Y6G9 523 aaKnown RBP17.32■□□□□ 0.36
PTPRA-206ENST00000430705 ATG2BQ96BY7 2078 aa17.32■□□□□ 0.36
PTPRA-206ENST00000430705 PDXKO00764 312 aa17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms