RNA–Protein interactions for RNA: ENST00000429846.1

MSH5-208, Transcript of mutS homolog 5, humanhuman

TSL 3

Gene MSH5, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-208ENST00000429846 CYP27A1Q02318 531 aa15.9■□□□□ 0.14
MSH5-208ENST00000429846 CYP24A1Q07973 514 aa15.9■□□□□ 0.14
MSH5-208ENST00000429846 EHHADHQ08426 723 aa15.9■□□□□ 0.14
MSH5-208ENST00000429846 SYT13Q7L8C5 426 aa15.9■□□□□ 0.14
MSH5-208ENST00000429846 HS2ST1Q7LGA3 356 aa15.9■□□□□ 0.14
MSH5-208ENST00000429846 XXYLT1Q8NBI6 393 aa15.9■□□□□ 0.14
MSH5-208ENST00000429846 SH3RF2Q8TEC5 729 aa15.9■□□□□ 0.14
MSH5-208ENST00000429846 DDX1Q92499 740 aaKnown RBP15.9■□□□□ 0.14
MSH5-208ENST00000429846 PCED1BQ96HM7 432 aa15.9■□□□□ 0.14
MSH5-208ENST00000429846 TTLL2Q9BWV7 592 aa15.9■□□□□ 0.14
MSH5-208ENST00000429846 SNX25Q9H3E2 840 aa15.9■□□□□ 0.14
MSH5-208ENST00000429846 TRPM5Q9NZQ8 1165 aa15.9■□□□□ 0.14
MSH5-208ENST00000429846 PCDHGA5Q9Y5G8 931 aa15.9■□□□□ 0.14
MSH5-208ENST00000429846 WNT6Q9Y6F9 365 aa15.9■□□□□ 0.14
MSH5-208ENST00000429846 GNL1P36915 607 aaPredicted RBP15.89■□□□□ 0.13
MSH5-208ENST00000429846 RAP1GAPP47736 663 aa15.89■□□□□ 0.13
MSH5-208ENST00000429846 BMT2Q1RMZ1 405 aa15.89■□□□□ 0.13
MSH5-208ENST00000429846 SHC4Q6S5L8 630 aa15.89■□□□□ 0.13
MSH5-208ENST00000429846 C12orf56Q8IXR9 622 aa15.89■□□□□ 0.13
MSH5-208ENST00000429846 RDH13Q8NBN7 331 aa15.89■□□□□ 0.13
MSH5-208ENST00000429846 TTC16Q8NEE8 873 aa15.89■□□□□ 0.13
MSH5-208ENST00000429846 RPLP0P6Q8NHW5 317 aa15.89■□□□□ 0.13
MSH5-208ENST00000429846 SCFD1Q8WVM8 642 aa15.89■□□□□ 0.13
MSH5-208ENST00000429846 ZC3H10Q96K80 434 aaKnown RBP15.89■□□□□ 0.13
MSH5-208ENST00000429846 C8orf48Q96LL4 319 aa15.89■□□□□ 0.13
MSH5-208ENST00000429846 BACH2Q9BYV9 841 aa15.89■□□□□ 0.13
MSH5-208ENST00000429846 ELOVL4Q9GZR5 314 aa15.89■□□□□ 0.13
MSH5-208ENST00000429846 FBRSL1Q9HCM7 1045 aaKnown RBP15.89■□□□□ 0.13
MSH5-208ENST00000429846 AXIN1O15169 862 aa15.88■□□□□ 0.13
MSH5-208ENST00000429846 OLFM2O95897 454 aa15.88■□□□□ 0.13
MSH5-208ENST00000429846 ADRB1P08588 477 aa15.88■□□□□ 0.13
MSH5-208ENST00000429846 PDGFRBP09619 1106 aa15.88■□□□□ 0.13
MSH5-208ENST00000429846 ZNF806P0C7X5 589 aa15.88■□□□□ 0.13
MSH5-208ENST00000429846 HOXC13P31276 330 aa15.88■□□□□ 0.13
MSH5-208ENST00000429846 ATICP31939 592 aa15.88■□□□□ 0.13
MSH5-208ENST00000429846 PXNP49023 591 aaPredicted RBP15.88■□□□□ 0.13
MSH5-208ENST00000429846 CYP2J2P51589 502 aa15.88■□□□□ 0.13
MSH5-208ENST00000429846 LIMK1P53667 647 aa15.88■□□□□ 0.13
MSH5-208ENST00000429846 SLC7A9P82251 487 aa15.88■□□□□ 0.13
MSH5-208ENST00000429846 TRPC3Q13507 836 aa15.88■□□□□ 0.13
MSH5-208ENST00000429846 WDR72Q3MJ13 1102 aa15.88■□□□□ 0.13
MSH5-208ENST00000429846 MDH1BQ5I0G3 518 aa15.88■□□□□ 0.13
MSH5-208ENST00000429846 C12orf50Q8NA57 414 aaPredicted RBP15.88■□□□□ 0.13
MSH5-208ENST00000429846 OR6B3Q8NGW1 331 aa15.88■□□□□ 0.13
MSH5-208ENST00000429846 TFIP11Q9UBB9 837 aaKnown RBP15.88■□□□□ 0.13
MSH5-208ENST00000429846 EBF1Q9UH73 591 aa15.88■□□□□ 0.13
MSH5-208ENST00000429846 TPRP12270 2363 aaKnown RBP15.88■□□□□ 0.13
MSH5-208ENST00000429846 SDK1Q7Z5N4 2213 aa15.87■□□□□ 0.13
MSH5-208ENST00000429846 PVALEFA0A1B0GWK0 134 aa15.87■□□□□ 0.13
MSH5-208ENST00000429846 F8VP50 259 aa15.87■□□□□ 0.13
MSH5-208ENST00000429846 APBB3O95704 486 aa15.87■□□□□ 0.13
MSH5-208ENST00000429846 CST3P01034 146 aaPredicted RBP15.87■□□□□ 0.13
MSH5-208ENST00000429846 USP46P62068 366 aa15.87■□□□□ 0.13
MSH5-208ENST00000429846 DMC1Q14565 340 aa15.87■□□□□ 0.13
MSH5-208ENST00000429846 AASDHQ4L235 1098 aaPredicted RBP15.87■□□□□ 0.13
MSH5-208ENST00000429846 NAIF1Q69YI7 327 aaPredicted RBP15.87■□□□□ 0.13
MSH5-208ENST00000429846 ATL3Q6DD88 541 aa15.87■□□□□ 0.13
MSH5-208ENST00000429846 KBTBD6Q86V97 674 aa15.87■□□□□ 0.13
MSH5-208ENST00000429846 DDX42Q86XP3 938 aaKnown RBP eCLIP15.87■□□□□ 0.13
MSH5-208ENST00000429846 NELFCDQ8IXH7 590 aa15.87■□□□□ 0.13
MSH5-208ENST00000429846 GOLGA5Q8TBA6 731 aa15.87■□□□□ 0.13
MSH5-208ENST00000429846 SNX21Q969T3 373 aa15.87■□□□□ 0.13
MSH5-208ENST00000429846 SYAP1Q96A49 352 aaPredicted RBP15.87■□□□□ 0.13
MSH5-208ENST00000429846 CCDC127Q96BQ5 260 aa15.87■□□□□ 0.13
MSH5-208ENST00000429846 SLITRK1Q96PX8 696 aa15.87■□□□□ 0.13
MSH5-208ENST00000429846 HHIPQ96QV1 700 aa15.87■□□□□ 0.13
MSH5-208ENST00000429846 MRPL45Q9BRJ2 306 aaKnown RBP15.87■□□□□ 0.13
MSH5-208ENST00000429846 ARRDC1-AS1Q9H2J1 176 aa15.87■□□□□ 0.13
MSH5-208ENST00000429846 VRTNQ9H8Y1 702 aa15.87■□□□□ 0.13
MSH5-208ENST00000429846 FAM13BQ9NYF5 915 aa15.87■□□□□ 0.13
MSH5-208ENST00000429846 ACACBO00763 2458 aa15.86■□□□□ 0.13
MSH5-208ENST00000429846 ZNF840PA6NDX5 716 aa15.86■□□□□ 0.13
MSH5-208ENST00000429846 LEFTY2O00292 366 aa15.86■□□□□ 0.13
MSH5-208ENST00000429846 SLC9A3R1O14745 358 aaPredicted RBP15.86■□□□□ 0.13
MSH5-208ENST00000429846 CLIC2O15247 247 aa15.86■□□□□ 0.13
MSH5-208ENST00000429846 POLR2DO15514 142 aaKnown RBP15.86■□□□□ 0.13
MSH5-208ENST00000429846 GDF9O60383 454 aa15.86■□□□□ 0.13
MSH5-208ENST00000429846 OAS1P00973 400 aaKnown RBP15.86■□□□□ 0.13
MSH5-208ENST00000429846 PTPN1P18031 435 aaKnown RBP15.86■□□□□ 0.13
MSH5-208ENST00000429846 AP3M2P53677 418 aa15.86■□□□□ 0.13
MSH5-208ENST00000429846 PSMD2Q13200 908 aa15.86■□□□□ 0.13
MSH5-208ENST00000429846 ELF2Q15723 593 aa15.86■□□□□ 0.13
MSH5-208ENST00000429846 KNOP1Q1ED39 458 aaKnown RBP15.86■□□□□ 0.13
MSH5-208ENST00000429846 PPM1JQ5JR12 505 aa15.86■□□□□ 0.13
MSH5-208ENST00000429846 PLA2G2CQ5R387 149 aa15.86■□□□□ 0.13
MSH5-208ENST00000429846 TDRD10Q5VZ19 366 aaKnown RBP15.86■□□□□ 0.13
MSH5-208ENST00000429846 IL31Q6EBC2 164 aa15.86■□□□□ 0.13
MSH5-208ENST00000429846 B3GALNT2Q8NCR0 500 aa15.86■□□□□ 0.13
MSH5-208ENST00000429846 PDZD8Q8NEN9 1154 aa15.86■□□□□ 0.13
MSH5-208ENST00000429846 OVCA2Q8WZ82 227 aa15.86■□□□□ 0.13
MSH5-208ENST00000429846 EZH1Q92800 747 aaPredicted RBP15.86■□□□□ 0.13
MSH5-208ENST00000429846 ATP8B3O60423 1300 aa15.86■□□□□ 0.13
MSH5-208ENST00000429846 A8MXQ7 604 aa15.85■□□□□ 0.13
MSH5-208ENST00000429846 EXOC3O60645 756 aa15.85■□□□□ 0.13
MSH5-208ENST00000429846 RHOBTB1O94844 696 aa15.85■□□□□ 0.13
MSH5-208ENST00000429846 RTN3O95197 1032 aaPredicted RBP15.85■□□□□ 0.13
MSH5-208ENST00000429846 MPLP40238 635 aa15.85■□□□□ 0.13
MSH5-208ENST00000429846 EIF2DP41214 584 aaKnown RBP15.85■□□□□ 0.13
MSH5-208ENST00000429846 ZXDBP98169 803 aa15.85■□□□□ 0.13
MSH5-208ENST00000429846 PLK5Q496M5 336 aa15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 127.5 ms