RNA–Protein interactions for RNA: ENST00000429801.5

NUP98-207, Transcript of nucleoporin 98, humanhuman

TSL 1 (best)

Gene NUP98, Length 2,541 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-207ENST00000429801 XPOTO43592 962 aaKnown RBP9.17□□□□□ -0.94
NUP98-207ENST00000429801 MGEA5O60502 916 aa9.17□□□□□ -0.94
NUP98-207ENST00000429801 NBNO60934 754 aa9.17□□□□□ -0.94
NUP98-207ENST00000429801 HLA-DRAP01903 254 aa9.17□□□□□ -0.94
NUP98-207ENST00000429801 NFICP08651 508 aa9.17□□□□□ -0.94
NUP98-207ENST00000429801 SP100P23497 879 aaPredicted RBP9.17□□□□□ -0.94
NUP98-207ENST00000429801 EIF2B5Q13144 721 aaKnown RBP9.17□□□□□ -0.94
NUP98-207ENST00000429801 NCOA4Q13772 614 aa9.17□□□□□ -0.94
NUP98-207ENST00000429801 SLC44A4Q53GD3 710 aa9.17□□□□□ -0.94
NUP98-207ENST00000429801 PLEKHG4Q58EX7 1191 aa9.17□□□□□ -0.94
NUP98-207ENST00000429801 DPY19L2P1Q6NXN4 242 aa9.17□□□□□ -0.94
NUP98-207ENST00000429801 LLGL2Q6P1M3 1020 aa9.17□□□□□ -0.94
NUP98-207ENST00000429801 ESX1Q8N693 406 aa9.17□□□□□ -0.94
NUP98-207ENST00000429801 SEMA4DQ92854 862 aa9.17□□□□□ -0.94
NUP98-207ENST00000429801 NT5C1BQ96P26 610 aa9.17□□□□□ -0.94
NUP98-207ENST00000429801 DNAJC7Q99615 494 aa9.17□□□□□ -0.94
NUP98-207ENST00000429801 PPP1R12CQ9BZL4 782 aa9.17□□□□□ -0.94
NUP98-207ENST00000429801 C1orf112Q9NSG2 853 aa9.17□□□□□ -0.94
NUP98-207ENST00000429801 GIT1Q9Y2X7 761 aa9.17□□□□□ -0.94
NUP98-207ENST00000429801 MTRF1O75570 445 aaKnown RBP9.17□□□□□ -0.94
NUP98-207ENST00000429801 KRT14P02533 472 aa9.17□□□□□ -0.94
NUP98-207ENST00000429801 TROVE2P10155 538 aaKnown RBP eCLIP9.17□□□□□ -0.94
NUP98-207ENST00000429801 KCNE1P15382 129 aa9.17□□□□□ -0.94
NUP98-207ENST00000429801 FOSL1P15407 271 aa9.17□□□□□ -0.94
NUP98-207ENST00000429801 EN2P19622 333 aaPredicted RBP9.17□□□□□ -0.94
NUP98-207ENST00000429801 ATP1A2P50993 1020 aa9.17□□□□□ -0.94
NUP98-207ENST00000429801 MTTPP55157 894 aa9.17□□□□□ -0.94
NUP98-207ENST00000429801 APBA1Q02410 837 aa9.17□□□□□ -0.94
NUP98-207ENST00000429801 GOLGA8FQ08AF8 430 aa9.17□□□□□ -0.94
NUP98-207ENST00000429801 GOLGA8DPQ0D2H9 430 aa9.17□□□□□ -0.94
NUP98-207ENST00000429801 SGSM1Q2NKQ1 1148 aa9.17□□□□□ -0.94
NUP98-207ENST00000429801 XKR4Q5GH76 650 aa9.17□□□□□ -0.94
NUP98-207ENST00000429801 GKAP1Q5VSY0 366 aaPredicted RBP9.17□□□□□ -0.94
NUP98-207ENST00000429801 KAZNQ674X7 775 aa9.17□□□□□ -0.94
NUP98-207ENST00000429801 SLC24A5Q71RS6 500 aa9.17□□□□□ -0.94
NUP98-207ENST00000429801 RRAGAQ7L523 313 aa9.17□□□□□ -0.94
NUP98-207ENST00000429801 ZNF554Q86TJ5 538 aa9.17□□□□□ -0.94
NUP98-207ENST00000429801 IFT43Q96FT9 208 aa9.17□□□□□ -0.94
NUP98-207ENST00000429801 MPP4Q96JB8 637 aa9.17□□□□□ -0.94
NUP98-207ENST00000429801 NAA15Q9BXJ9 866 aaKnown RBP9.17□□□□□ -0.94
NUP98-207ENST00000429801 RNF39Q9H2S5 420 aa9.17□□□□□ -0.94
NUP98-207ENST00000429801 MRPL46Q9H2W6 279 aaKnown RBP9.17□□□□□ -0.94
NUP98-207ENST00000429801 NLRC4Q9NPP4 1024 aa9.17□□□□□ -0.94
NUP98-207ENST00000429801 C6orf203Q9P0P8 240 aaPredicted RBP9.17□□□□□ -0.94
NUP98-207ENST00000429801 KLHL42Q9P2K6 505 aa9.17□□□□□ -0.94
NUP98-207ENST00000429801 HSFX1Q9UBD0 423 aa9.17□□□□□ -0.94
NUP98-207ENST00000429801 KIAA1257Q9ULG3 409 aa9.17□□□□□ -0.94
NUP98-207ENST00000429801 UMODL1Q5DID0 1318 aa9.17□□□□□ -0.94
NUP98-207ENST00000429801 RNF225M0QZC1 329 aaPredicted RBP9.16□□□□□ -0.94
NUP98-207ENST00000429801 VNN1O95497 513 aa9.16□□□□□ -0.94
NUP98-207ENST00000429801 EOMESO95936 686 aa9.16□□□□□ -0.94
NUP98-207ENST00000429801 CXCL10P02778 98 aa9.16□□□□□ -0.94
NUP98-207ENST00000429801 MSL3P1P0C860 447 aa9.16□□□□□ -0.94
NUP98-207ENST00000429801 GSTT1P30711 240 aa9.16□□□□□ -0.94
NUP98-207ENST00000429801 CYP2C18P33260 490 aa9.16□□□□□ -0.94
NUP98-207ENST00000429801 RFC2P35250 354 aa9.16□□□□□ -0.94
NUP98-207ENST00000429801 CCNFP41002 786 aa9.16□□□□□ -0.94
NUP98-207ENST00000429801 CD97P48960 835 aa9.16□□□□□ -0.94
NUP98-207ENST00000429801 CCL23P55773 120 aa9.16□□□□□ -0.94
NUP98-207ENST00000429801 GEMIN4P57678 1058 aaKnown RBP9.16□□□□□ -0.94
NUP98-207ENST00000429801 RAPGEF1Q13905 1077 aa9.16□□□□□ -0.94
NUP98-207ENST00000429801 GPNMBQ14956 572 aa9.16□□□□□ -0.94
NUP98-207ENST00000429801 COL19A1Q14993 1142 aa9.16□□□□□ -0.94
NUP98-207ENST00000429801 SKIV2LQ15477 1246 aaKnown RBP9.16□□□□□ -0.94
NUP98-207ENST00000429801 TAF11Q15544 211 aa9.16□□□□□ -0.94
NUP98-207ENST00000429801 PHLDB3Q6NSJ2 640 aa9.16□□□□□ -0.94
NUP98-207ENST00000429801 ENOSF1Q7L5Y1 443 aa9.16□□□□□ -0.94
NUP98-207ENST00000429801 DBF4BQ8NFT6 615 aa9.16□□□□□ -0.94
NUP98-207ENST00000429801 BEST2Q8NFU1 509 aa9.16□□□□□ -0.94
NUP98-207ENST00000429801 WDR60Q8WVS4 1066 aa9.16□□□□□ -0.94
NUP98-207ENST00000429801 BAP1Q92560 729 aa9.16□□□□□ -0.94
NUP98-207ENST00000429801 SYN2Q92777 582 aaPredicted RBP9.16□□□□□ -0.94
NUP98-207ENST00000429801 PPP2R3CQ969Q6 453 aa9.16□□□□□ -0.94
NUP98-207ENST00000429801 NAF1Q96HR8 494 aaKnown RBP9.16□□□□□ -0.94
NUP98-207ENST00000429801 SCLYQ96I15 445 aa9.16□□□□□ -0.94
NUP98-207ENST00000429801 STK33Q9BYT3 514 aa9.16□□□□□ -0.94
NUP98-207ENST00000429801 WNT8AQ9H1J5 351 aa9.16□□□□□ -0.94
NUP98-207ENST00000429801 UBE2TQ9NPD8 197 aaPredicted RBP9.16□□□□□ -0.94
NUP98-207ENST00000429801 DPP3Q9NY33 737 aa9.16□□□□□ -0.94
NUP98-207ENST00000429801 KLK14Q9P0G3 267 aa9.16□□□□□ -0.94
NUP98-207ENST00000429801 DNAJC12Q9UKB3 198 aa9.16□□□□□ -0.94
NUP98-207ENST00000429801 ITGA11Q9UKX5 1188 aa9.16□□□□□ -0.94
NUP98-207ENST00000429801 UBQLN1Q9UMX0 589 aaKnown RBP9.16□□□□□ -0.94
NUP98-207ENST00000429801 TTLL3Q9Y4R7 772 aa9.16□□□□□ -0.94
NUP98-207ENST00000429801 SMIM28A0A1B0GU29 152 aa9.16□□□□□ -0.94
NUP98-207ENST00000429801 LRRC53A6NM62 1247 aa9.16□□□□□ -0.94
NUP98-207ENST00000429801 TEX28O15482 410 aa9.16□□□□□ -0.94
NUP98-207ENST00000429801 KDM1AO60341 852 aa9.16□□□□□ -0.94
NUP98-207ENST00000429801 CST3P01034 146 aaPredicted RBP9.16□□□□□ -0.94
NUP98-207ENST00000429801 ALDH2P05091 517 aa9.16□□□□□ -0.94
NUP98-207ENST00000429801 VIMP08670 466 aaKnown RBP9.16□□□□□ -0.94
NUP98-207ENST00000429801 KRT19P08727 400 aa9.16□□□□□ -0.94
NUP98-207ENST00000429801 LSP1P33241 339 aa9.16□□□□□ -0.94
NUP98-207ENST00000429801 MFAP3P55082 362 aa9.16□□□□□ -0.94
NUP98-207ENST00000429801 GCNT1Q02742 428 aa9.16□□□□□ -0.94
NUP98-207ENST00000429801 PPIDQ08752 370 aaKnown RBP9.16□□□□□ -0.94
NUP98-207ENST00000429801 PPP1R7Q15435 360 aa9.16□□□□□ -0.94
NUP98-207ENST00000429801 IQCEQ6IPM2 695 aa9.16□□□□□ -0.94
NUP98-207ENST00000429801 PDXDC1Q6P996 788 aa9.16□□□□□ -0.94
NUP98-207ENST00000429801 C11orf96Q7Z7L8 435 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms