RNA–Protein interactions for RNA: ENST00000429713.6

SYNPO2-202, Transcript of synaptopodin 2, humanhuman

TSL 1 (best) BASIC

Gene SYNPO2, Length 9,920 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-202ENST00000429713 SRGAP2BP0DMP2 458 aa7.81□□□□□ -1.16
SYNPO2-202ENST00000429713 RORAP35398 523 aa7.81□□□□□ -1.16
SYNPO2-202ENST00000429713 SLC12A2P55011 1212 aa7.81□□□□□ -1.16
SYNPO2-202ENST00000429713 UGP2Q16851 508 aa7.81□□□□□ -1.16
SYNPO2-202ENST00000429713 DEPDC1Q5TB30 811 aa7.81□□□□□ -1.16
SYNPO2-202ENST00000429713 KIAA0408Q6ZU52 694 aa7.81□□□□□ -1.16
SYNPO2-202ENST00000429713 PHF20Q9BVI0 1012 aa7.81□□□□□ -1.16
SYNPO2-202ENST00000429713 HIPK3Q9H422 1215 aa7.81□□□□□ -1.16
SYNPO2-202ENST00000429713 DDX56Q9NY93 547 aaKnown RBP7.81□□□□□ -1.16
SYNPO2-202ENST00000429713 VPS4AQ9UN37 437 aa7.81□□□□□ -1.16
SYNPO2-202ENST00000429713 GRIN2DO15399 1336 aa7.81□□□□□ -1.16
SYNPO2-202ENST00000429713 TRIM43BA6NCK2 446 aa7.81□□□□□ -1.16
SYNPO2-202ENST00000429713 CLDN25C9JDP6 229 aa7.81□□□□□ -1.16
SYNPO2-202ENST00000429713 MEIS1O00470 390 aa7.81□□□□□ -1.16
SYNPO2-202ENST00000429713 DDX3XO00571 662 aaKnown RBP eCLIP7.81□□□□□ -1.16
SYNPO2-202ENST00000429713 DLGAP3O95886 979 aa7.81□□□□□ -1.16
SYNPO2-202ENST00000429713 CALB1P05937 261 aa7.81□□□□□ -1.16
SYNPO2-202ENST00000429713 THRAP10827 490 aa7.81□□□□□ -1.16
SYNPO2-202ENST00000429713 KRT20P35900 424 aa7.81□□□□□ -1.16
SYNPO2-202ENST00000429713 LIG4P49917 911 aa7.81□□□□□ -1.16
SYNPO2-202ENST00000429713 LLGL1Q15334 1064 aa7.81□□□□□ -1.16
SYNPO2-202ENST00000429713 TNFAIP8L3Q5GJ75 292 aa7.81□□□□□ -1.16
SYNPO2-202ENST00000429713 TAS2R42Q7RTR8 314 aa7.81□□□□□ -1.16
SYNPO2-202ENST00000429713 KYQ8NBH2 561 aa7.81□□□□□ -1.16
SYNPO2-202ENST00000429713 SLC39A3Q9BRY0 314 aa7.81□□□□□ -1.16
SYNPO2-202ENST00000429713 AS3MTQ9HBK9 375 aa7.81□□□□□ -1.16
SYNPO2-202ENST00000429713 RPRD1BQ9NQG5 326 aaKnown RBP7.81□□□□□ -1.16
SYNPO2-202ENST00000429713 TAF6LQ9Y6J9 622 aa7.81□□□□□ -1.16
SYNPO2-202ENST00000429713 AGLP35573 1532 aa7.81□□□□□ -1.16
SYNPO2-202ENST00000429713 NMT2O60551 498 aa7.81□□□□□ -1.16
SYNPO2-202ENST00000429713 CNPY1Q3B7I2 92 aa7.81□□□□□ -1.16
SYNPO2-202ENST00000429713 ERICH1Q86X53 443 aa7.81□□□□□ -1.16
SYNPO2-202ENST00000429713 SLC26A7Q8TE54 656 aa7.81□□□□□ -1.16
SYNPO2-202ENST00000429713 BDH2Q9BUT1 245 aa7.81□□□□□ -1.16
SYNPO2-202ENST00000429713 KCND2Q9NZV8 630 aa7.81□□□□□ -1.16
SYNPO2-202ENST00000429713 POLIQ9UNA4 740 aa7.81□□□□□ -1.16
SYNPO2-202ENST00000429713 RXRBP28702 533 aa7.8□□□□□ -1.16
SYNPO2-202ENST00000429713 TNFAIP2Q03169 654 aa7.8□□□□□ -1.16
SYNPO2-202ENST00000429713 HIF1AQ16665 826 aa7.8□□□□□ -1.16
SYNPO2-202ENST00000429713 NAALADL2Q58DX5 795 aa7.8□□□□□ -1.16
SYNPO2-202ENST00000429713 COA7Q96BR5 231 aa7.8□□□□□ -1.16
SYNPO2-202ENST00000429713 TMEM206Q9H813 350 aa7.8□□□□□ -1.16
SYNPO2-202ENST00000429713 ING3Q9NXR8 418 aa7.8□□□□□ -1.16
SYNPO2-202ENST00000429713 PCDHB4Q9Y5E5 795 aa7.8□□□□□ -1.16
SYNPO2-202ENST00000429713 WDR47O94967 919 aa7.8□□□□□ -1.16
SYNPO2-202ENST00000429713 CCNE2O96020 404 aa7.8□□□□□ -1.16
SYNPO2-202ENST00000429713 PDGFRBP09619 1106 aa7.8□□□□□ -1.16
SYNPO2-202ENST00000429713 SRGAP2CP0DJJ0 459 aa7.8□□□□□ -1.16
SYNPO2-202ENST00000429713 RGS7P49802 495 aa7.8□□□□□ -1.16
SYNPO2-202ENST00000429713 RAD23AP54725 363 aa7.8□□□□□ -1.16
SYNPO2-202ENST00000429713 ATP6V0D1P61421 351 aa7.8□□□□□ -1.16
SYNPO2-202ENST00000429713 ZYXQ15942 572 aaKnown RBP7.8□□□□□ -1.16
SYNPO2-202ENST00000429713 NMD3Q96D46 503 aaKnown RBP7.8□□□□□ -1.16
SYNPO2-202ENST00000429713 NSMCE3Q96MG7 304 aa7.8□□□□□ -1.16
SYNPO2-202ENST00000429713 DYRK4Q9NR20 520 aa7.8□□□□□ -1.16
SYNPO2-202ENST00000429713 FAIMQ9NVQ4 179 aa7.8□□□□□ -1.16
SYNPO2-202ENST00000429713 ZNHIT2Q9UHR6 403 aa7.8□□□□□ -1.16
SYNPO2-202ENST00000429713 AGAP1Q9UPQ3 857 aa7.8□□□□□ -1.16
SYNPO2-202ENST00000429713 PNMA6FA0A0J9YX94 578 aa7.8□□□□□ -1.16
SYNPO2-202ENST00000429713 GSSP48637 474 aa7.8□□□□□ -1.16
SYNPO2-202ENST00000429713 THOP1P52888 689 aa7.8□□□□□ -1.16
SYNPO2-202ENST00000429713 CSNK2BP67870 215 aa7.8□□□□□ -1.16
SYNPO2-202ENST00000429713 SULT1C3Q6IMI6 304 aa7.8□□□□□ -1.16
SYNPO2-202ENST00000429713 FRMD5Q7Z6J6 570 aa7.8□□□□□ -1.16
SYNPO2-202ENST00000429713 GALNT6Q8NCL4 622 aa7.8□□□□□ -1.16
SYNPO2-202ENST00000429713 ZNF577Q9BSK1 485 aa7.8□□□□□ -1.16
SYNPO2-202ENST00000429713 CRNNQ9UBG3 495 aaPredicted RBP7.8□□□□□ -1.16
SYNPO2-202ENST00000429713 AMACRQ9UHK6 382 aa7.8□□□□□ -1.16
SYNPO2-202ENST00000429713 NOS1APO75052 506 aaPredicted RBP7.8□□□□□ -1.16
SYNPO2-202ENST00000429713 PYGLP06737 847 aa7.8□□□□□ -1.16
SYNPO2-202ENST00000429713 CARSP49589 748 aaKnown RBP7.8□□□□□ -1.16
SYNPO2-202ENST00000429713 OASLQ15646 514 aaKnown RBP7.8□□□□□ -1.16
SYNPO2-202ENST00000429713 ATG9AQ7Z3C6 839 aa7.8□□□□□ -1.16
SYNPO2-202ENST00000429713 PIGWQ7Z7B1 504 aa7.8□□□□□ -1.16
SYNPO2-202ENST00000429713 CKAP2Q8WWK9 683 aa7.8□□□□□ -1.16
SYNPO2-202ENST00000429713 MAP3K14Q99558 947 aa7.8□□□□□ -1.16
SYNPO2-202ENST00000429713 MANSC1Q9H8J5 431 aa7.8□□□□□ -1.16
SYNPO2-202ENST00000429713 PNMA3Q9UL41 463 aa7.8□□□□□ -1.16
SYNPO2-202ENST00000429713 SALL3Q9BXA9 1300 aa7.8□□□□□ -1.16
SYNPO2-202ENST00000429713 GPR75-ASB3A0A0A6YYF3 556 aa7.8□□□□□ -1.16
SYNPO2-202ENST00000429713 CAMTA2O94983 1202 aa7.8□□□□□ -1.16
SYNPO2-202ENST00000429713 POLR2MP0CAP2 368 aa7.8□□□□□ -1.16
SYNPO2-202ENST00000429713 P4HA1P13674 534 aa7.8□□□□□ -1.16
SYNPO2-202ENST00000429713 IST1P53990 364 aa7.8□□□□□ -1.16
SYNPO2-202ENST00000429713 PDK4Q16654 411 aa7.8□□□□□ -1.16
SYNPO2-202ENST00000429713 TAF1BQ53T94 588 aaPredicted RBP7.8□□□□□ -1.16
SYNPO2-202ENST00000429713 BROXQ5VW32 411 aa7.8□□□□□ -1.16
SYNPO2-202ENST00000429713 UBE2OQ9C0C9 1292 aaKnown RBP7.8□□□□□ -1.16
SYNPO2-202ENST00000429713 EFCAB1Q9HAE3 211 aa7.8□□□□□ -1.16
SYNPO2-202ENST00000429713 SCN3BQ9NY72 215 aa7.8□□□□□ -1.16
SYNPO2-202ENST00000429713 ASB3Q9Y575 518 aa7.8□□□□□ -1.16
SYNPO2-202ENST00000429713 FCER1AP12319 257 aa7.8□□□□□ -1.16
SYNPO2-202ENST00000429713 CCNA2P20248 432 aa7.8□□□□□ -1.16
SYNPO2-202ENST00000429713 COASYQ13057 564 aa7.8□□□□□ -1.16
SYNPO2-202ENST00000429713 SAMD4BQ5PRF9 694 aaKnown RBP7.8□□□□□ -1.16
SYNPO2-202ENST00000429713 EML4Q9HC35 981 aaKnown RBP7.8□□□□□ -1.16
SYNPO2-202ENST00000429713 ZNF277Q9NRM2 450 aaPredicted RBP7.8□□□□□ -1.16
SYNPO2-202ENST00000429713 FAM8A1Q9UBU6 413 aa7.8□□□□□ -1.16
SYNPO2-202ENST00000429713 HPSEQ9Y251 543 aa7.8□□□□□ -1.16
SYNPO2-202ENST00000429713 MYPNQ86TC9 1320 aa7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms