RNA–Protein interactions for RNA: ENST00000429490.5

SGMS1-203, Transcript of sphingomyelin synthase 1, humanhuman

TSL 5 BASIC

Gene SGMS1, Length 3,634 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-203ENST00000429490 MED21Q13503 144 aa14.34□□□□□ -0.11
SGMS1-203ENST00000429490 TLDC1Q6P9B6 456 aa14.34□□□□□ -0.11
SGMS1-203ENST00000429490 C4orf50Q6ZRC1 276 aa14.34□□□□□ -0.11
SGMS1-203ENST00000429490 CCNJLQ8IV13 435 aa14.34□□□□□ -0.11
SGMS1-203ENST00000429490 DCLK2Q8N568 766 aa14.34□□□□□ -0.11
SGMS1-203ENST00000429490 NETO2Q8NC67 525 aa14.34□□□□□ -0.11
SGMS1-203ENST00000429490 NIF3L1Q9GZT8 377 aa14.34□□□□□ -0.11
SGMS1-203ENST00000429490 DNAJC5Q9H3Z4 198 aa14.34□□□□□ -0.11
SGMS1-203ENST00000429490 ZNF395Q9H8N7 513 aaPredicted RBP14.34□□□□□ -0.11
SGMS1-203ENST00000429490 RPF1Q9H9Y2 349 aaKnown RBP14.34□□□□□ -0.11
SGMS1-203ENST00000429490 GLI3P10071 1580 aa14.33□□□□□ -0.11
SGMS1-203ENST00000429490 C2CD2LO14523 706 aa14.33□□□□□ -0.11
SGMS1-203ENST00000429490 GSC2O15499 205 aa14.33□□□□□ -0.11
SGMS1-203ENST00000429490 STK10O94804 968 aaKnown RBP14.33□□□□□ -0.11
SGMS1-203ENST00000429490 SNUPNO95149 360 aaKnown RBP14.33□□□□□ -0.11
SGMS1-203ENST00000429490 HSPA4LO95757 839 aa14.33□□□□□ -0.11
SGMS1-203ENST00000429490 CD48P09326 243 aa14.33□□□□□ -0.11
SGMS1-203ENST00000429490 TCN1P20061 433 aaPredicted RBP14.33□□□□□ -0.11
SGMS1-203ENST00000429490 TYK2P29597 1187 aa14.33□□□□□ -0.11
SGMS1-203ENST00000429490 C1QBPQ07021 282 aaKnown RBP14.33□□□□□ -0.11
SGMS1-203ENST00000429490 NFIL3Q16649 462 aa14.33□□□□□ -0.11
SGMS1-203ENST00000429490 PARP6Q2NL67 630 aa14.33□□□□□ -0.11
SGMS1-203ENST00000429490 ZACNQ401N2 412 aa14.33□□□□□ -0.11
SGMS1-203ENST00000429490 POLNQ7Z5Q5 900 aa14.33□□□□□ -0.11
SGMS1-203ENST00000429490 TIPINQ9BVW5 301 aa14.33□□□□□ -0.11
SGMS1-203ENST00000429490 CEP41Q9BYV8 373 aa14.33□□□□□ -0.11
SGMS1-203ENST00000429490 HNRNPCL1O60812 293 aaKnown RBP14.33□□□□□ -0.12
SGMS1-203ENST00000429490 STAMBPO95630 424 aa14.33□□□□□ -0.12
SGMS1-203ENST00000429490 KCNA4P22459 653 aa14.33□□□□□ -0.12
SGMS1-203ENST00000429490 TNFSF9P41273 254 aa14.33□□□□□ -0.12
SGMS1-203ENST00000429490 CDK16Q00536 496 aa14.33□□□□□ -0.12
SGMS1-203ENST00000429490 ACSBG2Q5FVE4 666 aa14.33□□□□□ -0.12
SGMS1-203ENST00000429490 ANO7Q6IWH7 933 aa14.33□□□□□ -0.12
SGMS1-203ENST00000429490 USP6NLQ92738 828 aa14.33□□□□□ -0.12
SGMS1-203ENST00000429490 SYT11Q9BT88 431 aa14.33□□□□□ -0.12
SGMS1-203ENST00000429490 FAM49BQ9NUQ9 324 aa14.33□□□□□ -0.12
SGMS1-203ENST00000429490 MYPNQ86TC9 1320 aa14.33□□□□□ -0.12
SGMS1-203ENST00000429490 AIM2O14862 343 aa14.33□□□□□ -0.12
SGMS1-203ENST00000429490 ALOX15BO15296 676 aa14.33□□□□□ -0.12
SGMS1-203ENST00000429490 ZMPSTE24O75844 475 aa14.33□□□□□ -0.12
SGMS1-203ENST00000429490 UNGP13051 313 aaPredicted RBP14.33□□□□□ -0.12
SGMS1-203ENST00000429490 IVDP26440 423 aa14.33□□□□□ -0.12
SGMS1-203ENST00000429490 SLC25A3Q00325 362 aa14.33□□□□□ -0.12
SGMS1-203ENST00000429490 BST1Q10588 318 aa14.33□□□□□ -0.12
SGMS1-203ENST00000429490 GALNTL6Q49A17 601 aa14.33□□□□□ -0.12
SGMS1-203ENST00000429490 TCHHL1Q5QJ38 904 aaPredicted RBP14.33□□□□□ -0.12
SGMS1-203ENST00000429490 CEP70Q8NHQ1 597 aa14.33□□□□□ -0.12
SGMS1-203ENST00000429490 CDHR1Q96JP9 859 aa14.33□□□□□ -0.12
SGMS1-203ENST00000429490 POLIQ9UNA4 740 aa14.33□□□□□ -0.12
SGMS1-203ENST00000429490 SPDYE2BA6NHP3 402 aa14.32□□□□□ -0.12
SGMS1-203ENST00000429490 MTA2O94776 668 aa14.32□□□□□ -0.12
SGMS1-203ENST00000429490 CST3P01034 146 aaPredicted RBP14.32□□□□□ -0.12
SGMS1-203ENST00000429490 SPDYE6P0CI01 402 aa14.32□□□□□ -0.12
SGMS1-203ENST00000429490 MAPTP10636 758 aaKnown RBP14.32□□□□□ -0.12
SGMS1-203ENST00000429490 ACADSP16219 412 aa14.32□□□□□ -0.12
SGMS1-203ENST00000429490 NOVP48745 357 aa14.32□□□□□ -0.12
SGMS1-203ENST00000429490 CRADDP78560 199 aa14.32□□□□□ -0.12
SGMS1-203ENST00000429490 GEN1Q17RS7 908 aa14.32□□□□□ -0.12
SGMS1-203ENST00000429490 CGB2Q6NT52 195 aa14.32□□□□□ -0.12
SGMS1-203ENST00000429490 JOSD2Q8TAC2 188 aa14.32□□□□□ -0.12
SGMS1-203ENST00000429490 CLMNQ96JQ2 1002 aa14.32□□□□□ -0.12
SGMS1-203ENST00000429490 PXMP2Q9NR77 195 aa14.32□□□□□ -0.12
SGMS1-203ENST00000429490 LGALS13Q9UHV8 139 aa14.32□□□□□ -0.12
SGMS1-203ENST00000429490 NENFQ9UMX5 172 aa14.32□□□□□ -0.12
SGMS1-203ENST00000429490 hCG_1818297A0A087WSY0 165 aa14.32□□□□□ -0.12
SGMS1-203ENST00000429490 MAGEA13PA6NCF6 341 aa14.32□□□□□ -0.12
SGMS1-203ENST00000429490 PSEN1P49768 467 aa14.32□□□□□ -0.12
SGMS1-203ENST00000429490 SNRPFP62306 86 aaKnown RBP14.32□□□□□ -0.12
SGMS1-203ENST00000429490 MCL1Q07820 350 aa14.32□□□□□ -0.12
SGMS1-203ENST00000429490 MON1BQ7L1V2 547 aa14.32□□□□□ -0.12
SGMS1-203ENST00000429490 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP14.32□□□□□ -0.127e-7■■■■■ 59.7
SGMS1-203ENST00000429490 RNF148Q8N7C7 305 aa14.32□□□□□ -0.12
SGMS1-203ENST00000429490 C10orf82Q8WW14 230 aa14.32□□□□□ -0.12
SGMS1-203ENST00000429490 ZNF516Q92618 1163 aa14.32□□□□□ -0.12
SGMS1-203ENST00000429490 NMD3Q96D46 503 aaKnown RBP14.32□□□□□ -0.12
SGMS1-203ENST00000429490 SYT15Q9BQS2 421 aa14.32□□□□□ -0.12
SGMS1-203ENST00000429490 APOBEC3GQ9HC16 384 aaKnown RBP14.32□□□□□ -0.12
SGMS1-203ENST00000429490 ADAMTSL3P82987 1691 aa14.32□□□□□ -0.12
SGMS1-203ENST00000429490 ADCY3O60266 1144 aa14.32□□□□□ -0.12
SGMS1-203ENST00000429490 ZC3H11AO75152 810 aaKnown RBP eCLIP14.32□□□□□ -0.12
SGMS1-203ENST00000429490 MAP7D1Q3KQU3 841 aa14.32□□□□□ -0.12
SGMS1-203ENST00000429490 PPP1R2P3Q6NXS1 205 aa14.32□□□□□ -0.12
SGMS1-203ENST00000429490 RHBDF2Q6PJF5 856 aa14.32□□□□□ -0.12
SGMS1-203ENST00000429490 GALNT4Q8N4A0 578 aa14.32□□□□□ -0.12
SGMS1-203ENST00000429490 MIPOL1Q8TD10 442 aa14.32□□□□□ -0.12
SGMS1-203ENST00000429490 PRR11Q96HE9 360 aaPredicted RBP14.32□□□□□ -0.12
SGMS1-203ENST00000429490 WRNIP1Q96S55 665 aa14.32□□□□□ -0.12
SGMS1-203ENST00000429490 ZNF184Q99676 751 aaPredicted RBP14.32□□□□□ -0.12
SGMS1-203ENST00000429490 PIDD1Q9HB75 910 aa14.32□□□□□ -0.12
SGMS1-203ENST00000429490 TAS2R1Q9NYW7 299 aa14.32□□□□□ -0.12
SGMS1-203ENST00000429490 DNAJC16Q9Y2G8 782 aa14.32□□□□□ -0.12
SGMS1-203ENST00000429490 A0A1B0GUL6 1792 aa14.32□□□□□ -0.12
SGMS1-203ENST00000429490 CCDC88AQ3V6T2 1871 aa14.31□□□□□ -0.12
SGMS1-203ENST00000429490 TCRBV7S3A2A0A539 114 aa14.31□□□□□ -0.12
SGMS1-203ENST00000429490 TCRBV9S1A1TA0A576 114 aa14.31□□□□□ -0.12
SGMS1-203ENST00000429490 TM9SF1O15321 606 aa14.31□□□□□ -0.12
SGMS1-203ENST00000429490 ZNF862O60290 1169 aa14.31□□□□□ -0.12
SGMS1-203ENST00000429490 TBX10O75333 385 aa14.31□□□□□ -0.12
SGMS1-203ENST00000429490 P4HA1P13674 534 aa14.31□□□□□ -0.12
SGMS1-203ENST00000429490 SDC4P31431 198 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms