RNA–Protein interactions for RNA: ENST00000429440.5

CDC42BPA-206, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 2

Gene CDC42BPA, Length 2,501 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-206ENST00000429440 NOL4O94818 638 aa9.24□□□□□ -0.93
CDC42BPA-206ENST00000429440 PRKCAP17252 672 aa9.24□□□□□ -0.93
CDC42BPA-206ENST00000429440 ETFBP38117 255 aa9.24□□□□□ -0.93
CDC42BPA-206ENST00000429440 BMXP51813 675 aa9.24□□□□□ -0.93
CDC42BPA-206ENST00000429440 DGKDQ16760 1214 aa9.24□□□□□ -0.93
CDC42BPA-206ENST00000429440 METTL24Q5JXM2 366 aa9.24□□□□□ -0.93
CDC42BPA-206ENST00000429440 TTC38Q5R3I4 469 aa9.24□□□□□ -0.93
CDC42BPA-206ENST00000429440 GALNT13Q8IUC8 556 aa9.24□□□□□ -0.93
CDC42BPA-206ENST00000429440 REM2Q8IYK8 340 aaPredicted RBP9.24□□□□□ -0.93
CDC42BPA-206ENST00000429440 RFWD2Q8NHY2 731 aa9.24□□□□□ -0.93
CDC42BPA-206ENST00000429440 ZNF420Q8TAQ5 688 aaPredicted RBP9.24□□□□□ -0.93
CDC42BPA-206ENST00000429440 PYDC1Q8WXC3 89 aa9.24□□□□□ -0.93
CDC42BPA-206ENST00000429440 ISOC1Q96CN7 298 aa9.24□□□□□ -0.93
CDC42BPA-206ENST00000429440 DCUN1D1Q96GG9 259 aa9.24□□□□□ -0.93
CDC42BPA-206ENST00000429440 NLRP4Q96MN2 994 aa9.24□□□□□ -0.93
CDC42BPA-206ENST00000429440 RUBCNLQ9H714 662 aa9.24□□□□□ -0.93
CDC42BPA-206ENST00000429440 MAGEF1Q9HAY2 307 aa9.24□□□□□ -0.93
CDC42BPA-206ENST00000429440 LY9Q9HBG7 655 aa9.24□□□□□ -0.93
CDC42BPA-206ENST00000429440 DNAJC17Q9NVM6 304 aaKnown RBP9.24□□□□□ -0.93
CDC42BPA-206ENST00000429440 SEPT3Q9UH03 358 aa9.24□□□□□ -0.93
CDC42BPA-206ENST00000429440 DCTN4Q9UJW0 460 aa9.24□□□□□ -0.93
CDC42BPA-206ENST00000429440 APPL1Q9UKG1 709 aa9.24□□□□□ -0.93
CDC42BPA-206ENST00000429440 ZBTB21Q9ULJ3 1066 aa9.24□□□□□ -0.93
CDC42BPA-206ENST00000429440 POLIQ9UNA4 740 aa9.24□□□□□ -0.93
CDC42BPA-206ENST00000429440 CAPN8A6NHC0 703 aa9.24□□□□□ -0.93
CDC42BPA-206ENST00000429440 TRIM64BA6NI03 449 aa9.24□□□□□ -0.93
CDC42BPA-206ENST00000429440 ERVV-1B6SEH8 477 aa9.24□□□□□ -0.93
CDC42BPA-206ENST00000429440 PSMD12O00232 456 aaPredicted RBP9.24□□□□□ -0.93
CDC42BPA-206ENST00000429440 FCHO1O14526 889 aa9.24□□□□□ -0.93
CDC42BPA-206ENST00000429440 NKRFO15226 690 aaKnown RBP eCLIP9.24□□□□□ -0.93
CDC42BPA-206ENST00000429440 GPAA1O43292 621 aa9.24□□□□□ -0.93
CDC42BPA-206ENST00000429440 MYO1DO94832 1006 aa9.24□□□□□ -0.93
CDC42BPA-206ENST00000429440 PDE8BO95263 885 aa9.24□□□□□ -0.93
CDC42BPA-206ENST00000429440 POLR2MP0CAP2 368 aa9.24□□□□□ -0.93
CDC42BPA-206ENST00000429440 FGFR2P21802 821 aa9.24□□□□□ -0.93
CDC42BPA-206ENST00000429440 CTNNA2P26232 953 aa9.24□□□□□ -0.93
CDC42BPA-206ENST00000429440 ADD2P35612 726 aa9.24□□□□□ -0.93
CDC42BPA-206ENST00000429440 IL6STP40189 918 aaPredicted RBP9.24□□□□□ -0.93
CDC42BPA-206ENST00000429440 ALDH1A3P47895 512 aa9.24□□□□□ -0.93
CDC42BPA-206ENST00000429440 TRAPPC10P48553 1259 aa9.24□□□□□ -0.93
CDC42BPA-206ENST00000429440 RCAN1P53805 252 aa9.24□□□□□ -0.93
CDC42BPA-206ENST00000429440 STILQ15468 1287 aa9.24□□□□□ -0.93
CDC42BPA-206ENST00000429440 ASIC2Q16515 512 aa9.24□□□□□ -0.93
CDC42BPA-206ENST00000429440 CEP78Q5JTW2 689 aa9.24□□□□□ -0.93
CDC42BPA-206ENST00000429440 PAOXQ6QHF9 649 aa9.24□□□□□ -0.93
CDC42BPA-206ENST00000429440 CENPUQ71F23 418 aa9.24□□□□□ -0.93
CDC42BPA-206ENST00000429440 AMIGO2Q86SJ2 522 aa9.24□□□□□ -0.93
CDC42BPA-206ENST00000429440 CCDC25Q86WR0 208 aa9.24□□□□□ -0.93
CDC42BPA-206ENST00000429440 TDRPQ86YL5 185 aa9.24□□□□□ -0.93
CDC42BPA-206ENST00000429440 EEF2KMTQ96G04 330 aa9.24□□□□□ -0.93
CDC42BPA-206ENST00000429440 ZNF486Q96H40 463 aaPredicted RBP9.24□□□□□ -0.93
CDC42BPA-206ENST00000429440 RBM15Q96T37 977 aaKnown RBP eCLIP9.24□□□□□ -0.932e-6■■■□□ 16.7
CDC42BPA-206ENST00000429440 SLC2A11Q9BYW1 496 aa9.24□□□□□ -0.93
CDC42BPA-206ENST00000429440 INO80BQ9C086 356 aaPredicted RBP9.24□□□□□ -0.93
CDC42BPA-206ENST00000429440 HOXD1Q9GZZ0 328 aa9.24□□□□□ -0.93
CDC42BPA-206ENST00000429440 SSU72Q9NP77 194 aaKnown RBP9.24□□□□□ -0.93
CDC42BPA-206ENST00000429440 SACM1LQ9NTJ5 587 aa9.24□□□□□ -0.93
CDC42BPA-206ENST00000429440 RIC8BQ9NVN3 520 aa9.24□□□□□ -0.93
CDC42BPA-206ENST00000429440 HMGXB4Q9UGU5 601 aa9.24□□□□□ -0.93
CDC42BPA-206ENST00000429440 NAGPAQ9UK23 515 aa9.24□□□□□ -0.93
CDC42BPA-206ENST00000429440 DNAJC12Q9UKB3 198 aa9.24□□□□□ -0.93
CDC42BPA-206ENST00000429440 GRID1Q9ULK0 1009 aa9.24□□□□□ -0.93
CDC42BPA-206ENST00000429440 PCDHA12Q9UN75 941 aa9.24□□□□□ -0.93
CDC42BPA-206ENST00000429440 INPP5FQ9Y2H2 1132 aa9.24□□□□□ -0.93
CDC42BPA-206ENST00000429440 SPEF1Q9Y4P9 236 aa9.24□□□□□ -0.93
CDC42BPA-206ENST00000429440 A0A0G2JND7 137 aa9.23□□□□□ -0.93
CDC42BPA-206ENST00000429440 SNTNA6NMZ2 147 aa9.23□□□□□ -0.93
CDC42BPA-206ENST00000429440 ENPP3O14638 875 aa9.23□□□□□ -0.93
CDC42BPA-206ENST00000429440 DDHD2O94830 711 aa9.23□□□□□ -0.93
CDC42BPA-206ENST00000429440 BMP10O95393 424 aa9.23□□□□□ -0.93
CDC42BPA-206ENST00000429440 IL1BP01584 269 aa9.23□□□□□ -0.93
CDC42BPA-206ENST00000429440 KRT13P13646 458 aa9.23□□□□□ -0.93
CDC42BPA-206ENST00000429440 RPA1P27694 616 aa9.23□□□□□ -0.93
CDC42BPA-206ENST00000429440 HOXA7P31268 230 aaPredicted RBP9.23□□□□□ -0.93
CDC42BPA-206ENST00000429440 CHKAP35790 457 aa9.23□□□□□ -0.93
CDC42BPA-206ENST00000429440 PHKA1P46020 1223 aa9.23□□□□□ -0.93
CDC42BPA-206ENST00000429440 ATN1P54259 1190 aaPredicted RBP9.23□□□□□ -0.93
CDC42BPA-206ENST00000429440 DSTNP60981 165 aa9.23□□□□□ -0.93
CDC42BPA-206ENST00000429440 RAPGEF1Q13905 1077 aa9.23□□□□□ -0.93
CDC42BPA-206ENST00000429440 HIC1Q14526 733 aa9.23□□□□□ -0.93
CDC42BPA-206ENST00000429440 COG2Q14746 738 aa9.23□□□□□ -0.93
CDC42BPA-206ENST00000429440 CYP1B1Q16678 543 aa9.23□□□□□ -0.93
CDC42BPA-206ENST00000429440 KCTD19Q17RG1 926 aaPredicted RBP9.23□□□□□ -0.93
CDC42BPA-206ENST00000429440 NAALADL2Q58DX5 795 aa9.23□□□□□ -0.93
CDC42BPA-206ENST00000429440 DCAF12L1Q5VU92 463 aa9.23□□□□□ -0.93
CDC42BPA-206ENST00000429440 SCARA3Q6AZY7 606 aa9.23□□□□□ -0.93
CDC42BPA-206ENST00000429440 INTS5Q6P9B9 1019 aaKnown RBP9.23□□□□□ -0.93
CDC42BPA-206ENST00000429440 RHBDF2Q6PJF5 856 aa9.23□□□□□ -0.93
CDC42BPA-206ENST00000429440 TTC9Q92623 222 aa9.23□□□□□ -0.93
CDC42BPA-206ENST00000429440 OXNAD1Q96HP4 312 aaPredicted RBP9.23□□□□□ -0.93
CDC42BPA-206ENST00000429440 YME1L1Q96TA2 773 aa9.23□□□□□ -0.93
CDC42BPA-206ENST00000429440 DOK1Q99704 481 aa9.23□□□□□ -0.93
CDC42BPA-206ENST00000429440 C17orf80Q9BSJ5 609 aa9.23□□□□□ -0.93
CDC42BPA-206ENST00000429440 KIAA1586Q9HCI6 787 aa9.23□□□□□ -0.93
CDC42BPA-206ENST00000429440 TAGLN3Q9UI15 199 aa9.23□□□□□ -0.93
CDC42BPA-206ENST00000429440 TRMT112Q9UI30 125 aaKnown RBP9.23□□□□□ -0.93
CDC42BPA-206ENST00000429440 AGO2Q9UKV8 859 aaKnown RBP9.23□□□□□ -0.93
CDC42BPA-206ENST00000429440 NENFQ9UMX5 172 aa9.23□□□□□ -0.93
CDC42BPA-206ENST00000429440 CPQQ9Y646 472 aa9.23□□□□□ -0.93
CDC42BPA-206ENST00000429440 CHD4Q14839 1912 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms