RNA–Protein interactions for RNA: ENST00000429102.6

CDH3-202, Transcript of cadherin 3, humanhuman

TSL 1 (best) BASIC

Gene CDH3, Length 3,611 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-202ENST00000429102 ETS2P15036 469 aa13.05□□□□□ -0.32
CDH3-202ENST00000429102 SAT1P21673 171 aa13.05□□□□□ -0.32
CDH3-202ENST00000429102 UBAP2LQ14157 1087 aaKnown RBP13.05□□□□□ -0.32
CDH3-202ENST00000429102 C12orf56Q8IXR9 622 aa13.05□□□□□ -0.32
CDH3-202ENST00000429102 PPFIBP2Q8ND30 876 aa13.05□□□□□ -0.32
CDH3-202ENST00000429102 CCDC110Q8TBZ0 833 aa13.05□□□□□ -0.32
CDH3-202ENST00000429102 NSL1Q96IY1 281 aa13.05□□□□□ -0.32
CDH3-202ENST00000429102 KANSL3Q9P2N6 904 aa13.05□□□□□ -0.32
CDH3-202ENST00000429102 CDK5RAP2Q96SN8 1893 aa13.05□□□□□ -0.32
CDH3-202ENST00000429102 MAST2Q6P0Q8 1798 aa13.05□□□□□ -0.32
CDH3-202ENST00000429102 MCF2LO15068 1137 aa13.05□□□□□ -0.32
CDH3-202ENST00000429102 ALOX15BO15296 676 aa13.05□□□□□ -0.32
CDH3-202ENST00000429102 MMP8P22894 467 aa13.05□□□□□ -0.32
CDH3-202ENST00000429102 CCND2P30279 289 aa13.05□□□□□ -0.32
CDH3-202ENST00000429102 CDKN2BP42772 138 aa13.05□□□□□ -0.32
CDH3-202ENST00000429102 NEK3P51956 506 aa13.05□□□□□ -0.32
CDH3-202ENST00000429102 BLMHQ13867 455 aa13.05□□□□□ -0.32
CDH3-202ENST00000429102 RASA2Q15283 850 aa13.05□□□□□ -0.32
CDH3-202ENST00000429102 PTPN20Q4JDL3 420 aa13.05□□□□□ -0.32
CDH3-202ENST00000429102 PLEKHA7Q6IQ23 1121 aa13.05□□□□□ -0.32
CDH3-202ENST00000429102 CES3Q6UWW8 571 aa13.05□□□□□ -0.32
CDH3-202ENST00000429102 TMEM192Q8IY95 271 aa13.05□□□□□ -0.32
CDH3-202ENST00000429102 MCPH1Q8NEM0 835 aa13.05□□□□□ -0.32
CDH3-202ENST00000429102 PRPF31Q8WWY3 499 aaKnown RBP13.05□□□□□ -0.32
CDH3-202ENST00000429102 MOCOSQ96EN8 888 aa13.05□□□□□ -0.32
CDH3-202ENST00000429102 HEXIM2Q96MH2 286 aaKnown RBP13.05□□□□□ -0.32
CDH3-202ENST00000429102 TTC25Q96NG3 672 aa13.05□□□□□ -0.32
CDH3-202ENST00000429102 ANKEF1Q9NU02 776 aa13.05□□□□□ -0.32
CDH3-202ENST00000429102 TAS2R1Q9NYW7 299 aa13.05□□□□□ -0.32
CDH3-202ENST00000429102 SBF2Q86WG5 1849 aa13.04□□□□□ -0.32
CDH3-202ENST00000429102 ATRNL1Q5VV63 1379 aa13.04□□□□□ -0.32
CDH3-202ENST00000429102 CXorf49A8MYA2 514 aaPredicted RBP13.04□□□□□ -0.32
CDH3-202ENST00000429102 SORBS2O94875 1100 aaKnown RBP13.04□□□□□ -0.32
CDH3-202ENST00000429102 ALADP13716 330 aa13.04□□□□□ -0.32
CDH3-202ENST00000429102 KRT81Q14533 505 aa13.04□□□□□ -0.32
CDH3-202ENST00000429102 MORF4L2Q15014 288 aa13.04□□□□□ -0.32
CDH3-202ENST00000429102 NBPF12Q5TAG4 269 aaPredicted RBP13.04□□□□□ -0.32
CDH3-202ENST00000429102 RASIP1Q5U651 963 aa13.04□□□□□ -0.32
CDH3-202ENST00000429102 C4orf50Q6ZRC1 276 aa13.04□□□□□ -0.32
CDH3-202ENST00000429102 MAB21L3Q8N8X9 362 aa13.04□□□□□ -0.32
CDH3-202ENST00000429102 BATF3Q9NR55 127 aa13.04□□□□□ -0.32
CDH3-202ENST00000429102 HMGXB4Q9UGU5 601 aa13.04□□□□□ -0.32
CDH3-202ENST00000429102 TCRBV9S1A1TA0A576 114 aa13.04□□□□□ -0.32
CDH3-202ENST00000429102 KLRG2A4D1S0 409 aaPredicted RBP13.04□□□□□ -0.32
CDH3-202ENST00000429102 GSC2O15499 205 aa13.04□□□□□ -0.32
CDH3-202ENST00000429102 B4GALT5O43286 388 aa13.04□□□□□ -0.32
CDH3-202ENST00000429102 TYROBPO43914 113 aa13.04□□□□□ -0.32
CDH3-202ENST00000429102 CCDC22O60826 627 aa13.04□□□□□ -0.32
CDH3-202ENST00000429102 LYPLA1O75608 230 aaPredicted RBP13.04□□□□□ -0.32
CDH3-202ENST00000429102 RNF8O76064 485 aa13.04□□□□□ -0.32
CDH3-202ENST00000429102 PDE5AO76074 875 aa13.04□□□□□ -0.32
CDH3-202ENST00000429102 KCNA3P22001 575 aa13.04□□□□□ -0.32
CDH3-202ENST00000429102 AQP5P55064 265 aa13.04□□□□□ -0.32
CDH3-202ENST00000429102 C1orf146Q5VVC0 180 aa13.04□□□□□ -0.32
CDH3-202ENST00000429102 ENOSF1Q7L5Y1 443 aa13.04□□□□□ -0.32
CDH3-202ENST00000429102 PPIL6Q8IXY8 311 aa13.04□□□□□ -0.32
CDH3-202ENST00000429102 SLC38A10Q9HBR0 1119 aa13.04□□□□□ -0.32
CDH3-202ENST00000429102 ZNF302Q9NR11 478 aa13.04□□□□□ -0.32
CDH3-202ENST00000429102 I3L4J1 428 aa13.03□□□□□ -0.32
CDH3-202ENST00000429102 M0QYV0 167 aa13.03□□□□□ -0.32
CDH3-202ENST00000429102 RGS20O76081 388 aa13.03□□□□□ -0.32
CDH3-202ENST00000429102 SFNP31947 248 aa13.03□□□□□ -0.32
CDH3-202ENST00000429102 MSX2P35548 267 aaPredicted RBP13.03□□□□□ -0.32
CDH3-202ENST00000429102 ZNF200P98182 395 aaPredicted RBP13.03□□□□□ -0.32
CDH3-202ENST00000429102 C7orf31Q8N865 590 aa13.03□□□□□ -0.32
CDH3-202ENST00000429102 ZNF483Q8TF39 744 aaPredicted RBP13.03□□□□□ -0.32
CDH3-202ENST00000429102 NRG4Q8WWG1 115 aa13.03□□□□□ -0.32
CDH3-202ENST00000429102 SLCO2A1Q92959 643 aa13.03□□□□□ -0.32
CDH3-202ENST00000429102 CPXM1Q96SM3 734 aa13.03□□□□□ -0.32
CDH3-202ENST00000429102 WDR83Q9BRX9 315 aaKnown RBP13.03□□□□□ -0.32
CDH3-202ENST00000429102 BTBD10Q9BSF8 475 aa13.03□□□□□ -0.32
CDH3-202ENST00000429102 SEPT10Q9P0V9 454 aa13.03□□□□□ -0.32
CDH3-202ENST00000429102 STOML1Q9UBI4 398 aa13.03□□□□□ -0.32
CDH3-202ENST00000429102 LRCH4O75427 683 aa13.03□□□□□ -0.32
CDH3-202ENST00000429102 MIPP30301 263 aa13.03□□□□□ -0.32
CDH3-202ENST00000429102 GRIA1P42261 906 aa13.03□□□□□ -0.32
CDH3-202ENST00000429102 SERPINB4P48594 390 aa13.03□□□□□ -0.32
CDH3-202ENST00000429102 AMHR2Q16671 573 aa13.03□□□□□ -0.32
CDH3-202ENST00000429102 HADHQ16836 314 aaKnown RBP13.03□□□□□ -0.32
CDH3-202ENST00000429102 WDTC1Q8N5D0 677 aa13.03□□□□□ -0.32
CDH3-202ENST00000429102 PYDC1Q8WXC3 89 aa13.03□□□□□ -0.32
CDH3-202ENST00000429102 ZNRF3Q9ULT6 936 aa13.03□□□□□ -0.32
CDH3-202ENST00000429102 LUC7L3O95232 432 aaKnown RBP13.03□□□□□ -0.32
CDH3-202ENST00000429102 HSPA1LP34931 641 aa13.03□□□□□ -0.32
CDH3-202ENST00000429102 GTF2A2P52657 109 aa13.03□□□□□ -0.32
CDH3-202ENST00000429102 SLC25A3Q00325 362 aa13.03□□□□□ -0.32
CDH3-202ENST00000429102 PSMD6Q15008 389 aa13.03□□□□□ -0.32
CDH3-202ENST00000429102 NUDCD3Q8IVD9 361 aa13.03□□□□□ -0.32
CDH3-202ENST00000429102 NDUFAF2Q8N183 169 aa13.03□□□□□ -0.32
CDH3-202ENST00000429102 PHC3Q8NDX5 983 aa13.03□□□□□ -0.32
CDH3-202ENST00000429102 PIWIL1Q96J94 861 aaKnown RBP13.03□□□□□ -0.32
CDH3-202ENST00000429102 SRPK1Q96SB4 655 aaKnown RBP13.03□□□□□ -0.32
CDH3-202ENST00000429102 EBF4Q9BQW3 602 aa13.03□□□□□ -0.32
CDH3-202ENST00000429102 CYTH4Q9UIA0 394 aa13.03□□□□□ -0.32
CDH3-202ENST00000429102 C2CD2Q9Y426 696 aa13.03□□□□□ -0.32
CDH3-202ENST00000429102 ITGBL1O95965 494 aaPredicted RBP13.02□□□□□ -0.32
CDH3-202ENST00000429102 NCF2P19878 526 aaPredicted RBP13.02□□□□□ -0.32
CDH3-202ENST00000429102 KCNA4P22459 653 aa13.02□□□□□ -0.32
CDH3-202ENST00000429102 ZC3H12AQ5D1E8 599 aaKnown RBP13.02□□□□□ -0.32
CDH3-202ENST00000429102 VSIG10LQ86VR7 867 aa13.02□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms